CoChat
Sign Up
Cited by 147Plant-Microbe Interactions and ImmunityPlant Growth Enhancement TechniquesAgriculture, Plant Science, Crop Management

The DOI matches its Crossref record.

Plant growth-promoting traits of epiphytic and endophytic yeasts isolated from rice and sugar cane leaves in Thailand

Nutaratat, Pumin, Srisuk, Nantana, Arunrattiyakorn, Panarat, Limtong, Savitree·2014·Fungal Biology
DOI 10.1016/j.funbio.2014.04.010
Open this paper in CoChat — free account

Abstract

A total of 1035 yeast isolates, obtained from rice and sugar cane leaves, were screened primarily for indole-3-acetic acid (IAA) production. Thirteen isolates were selected, due to their IAA production ranging from 1.2 to 29.3 mg g(-)(1) DCW. These isolates were investigated for their capabilities of calcium phosphate and ZnO(3) solubilisation, and also for production of NH(3), polyamine, and siderophore. Their 1-aminocyclopropane-1-carboxylate (ACC) deaminase, catalase and fungal cell wall-degrading enzyme activities were assessed. Their antagonism against rice fungal pathogens was also evaluated. Strain identification, based on molecular taxonomy, of the thirteen yeast isolates revealed that four yeast species - i.e. Hannaella sinensis (DMKU-RP45), Cryptococcus flavus (DMKU-RE12, DMKU-RE19, DMKU-RE67, and DMKU-RP128), Rhodosporidium paludigenum (DMKU-RP301) and Torulaspora globosa (DMKU-RP31) - were capable of high IAA production. Catalase activity was detected in all yeast strains tested. The yeast R. paludigenum DMKU-RP301 was the best IAA producer, yielding 29.3 mg g(-)(1) DCW, and showed the ability to produce NH3 and siderophore. Different levels of IAA production (7.2-9.7 mg g(-)(1) DCW) were found in four strains of C. flavus DMKU-RE12, DMKU-RE19, and DMKU-RE67, which are rice leaf endophytes, and strain DMKU-RP128, which is a rice leaf epiphyte. NH(3) production and carboxymethyl cellulase (CMCase) activity was also detected in these four strains. Antagonism to fung…

Overview

Integrity signals

Registry

Crossref · 10.1016/j.funbio.2014.04.010

Cites

Statistics

Recomputing p-values needs the paper’s full text.

Verification

Claims the paper makes

This paper’s full text isn’t openly available, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Citations

Cites

No references could be resolved yet.

Research works printed but not linked: 63

  1. Ahemad, 2012, Effects of pesticides on plant growth promoting traits of Mesorhizobium strain MRC4, Journal of the Saudi Society of Agricultural Sciences, 11, 63, 10.1016/j.jssas.2011.10.001 · DOI
  2. Altschul, 1997, Gapped BLAST and PSIBLAST: a new generation of protein database search programs, Nucleic Acids Research, 25, 3389, 10.1093/nar/25.17.3389 · DOI · Paper page
  3. Amprayn, 2012, Plant growth promoting characteristics of soil yeast (Candida tropicalis HY) and its effectiveness for promoting rice growth, Applied Soil Ecology, 61, 295, 10.1016/j.apsoil.2011.11.009 · DOI · Paper page
  4. Bakker, 1987, Microbial cyanide production in the rhizosphere in relation to potato yield reduction and Pseudomonas spp. mediated plant growth stimulation, Soil Biology and Biochemistry, 19, 451, 10.1016/0038-0717(87)90037-X · DOI
  5. Calvente, 1999, Antagonistic action of siderophores from Rhodotorula glutinis upon the postharvest pathogen Penicillium expansum, International Biodeterioration and Biodegradation, 43, 167, 10.1016/S0964-8305(99)00046-3 · DOI
  6. Cattelan, 1999, Screening for plant growth-promoting rhizobacteria to promote early soybean growth, Soil Science Society of America Journal, 63, 1670, 10.2136/sssaj1999.6361670x · DOI
  7. Chaiharn, 2008, Screening of rhizobacteria for their plant growth promoting activities, KMITL Science and Technology Journal, 81, 18
  8. Cloete, 2009, Evidence of symbiosis between the soil yeast Cryptococcus laurentii and a sclerophyllous medicinal shrub, Agathosma betulina (Berg.) Pillans, Microbial Ecology, 57, 624, 10.1007/s00248-008-9457-9 · DOI
  9. Dell’Amico, 2005, Analysis of rhizobacterial communitiesin perennial Graminaceae from polluted water meadow soil, and screening of metal-resistant, potentially plant growth-promoting bacteria, FEMS Microbiology Ecology, 52, 153, 10.1016/j.femsec.2004.11.005 · DOI
  10. Deng, 2012, Characterization of heavy metal-resistant endophytic yeast Cryptococcus sp. CBSB78 from rapes (Brassica chinensis) and its potential in promoting the growth of Brassica spp. in metal-contaminated soils, Water Air and Soil Pollution, 223, 5321, 10.1007/s11270-012-1282-6 · DOI
  11. El-Tarabily, 2004, Suppression of Rhizoctonia solani diseases of sugar beet by antagonistic and plant growth-promoting yeasts, Journal of Applied Microbiology, 96, 69, 10.1046/j.1365-2672.2003.02043.x · DOI · Paper page
  12. El-Tarabily, 2008, Promotion of tomato (Lycopersicon esculentum Mill.) plant growth by rhizosphere competent 1-aminocyclopropane-1-carboxylic acid deaminase-producing streptomycete actinomycetes, Plant and Soil, 308, 161, 10.1007/s11104-008-9616-2 · DOI
  13. Fell, 1980, Rhodosporidium paludigenum sp. nov., a basidiomycetous yeast from intertidal waters of South Florida, International Journal of Systematic Bacteriology, 30, 658, 10.1099/00207713-30-4-658 · DOI
  14. Freeman, 1975, Production of hydrogen cyanide by Pseudomonas fluorescens, Applied Microbiology, 29, 560, 10.1128/AEM.29.4.560-561.1975 · DOI
  15. Fry, 1977, Association of formamide hydro-lyase with fungal pathogenicity to cyanogenic plants, Phytopathology, 67, 1001, 10.1094/Phyto-67-1001 · DOI
  16. Glick, 2004, Bacterial ACC deaminase and the alleviation of plant stress, Advances in Applied Microbiology, 56, 291, 10.1016/S0065-2164(04)56009-4 · DOI
  17. Glick, 2005, Modulation of plant ethylene levels by the enzyme ACC deaminase, FEMS Microbiology Letters, 251, 1, 10.1016/j.femsle.2005.07.030 · DOI
  18. Glick, 2007, Promotion of plant growth by ACC deaminase-containing soil bacteria, European Journal of Plant Pathology, 119, 329, 10.1007/s10658-007-9162-4 · DOI
  19. Glick, 2007, Promotion of plant growth by bacterial ACC deaminase, Critical Reviews in Plant Sciences, 26, 227, 10.1080/07352680701572966 · DOI
  20. Glickmann, 1994, A critical examination of the specificity of the salkowski reagent for indolic compounds produced by phytopathogenic bacteria, Applied and Environmental Microbiology, 61, 793, 10.1128/AEM.61.2.793-796.1995 · DOI
  21. Golubev, 1997, Mycocinogeny in the genus Bullera: taxonomic specificity of sensitivity to the mycocin produced by Bullera sinensis, FEMS Microbiology Letters, 146, 59, 10.1111/j.1574-6968.1997.tb10171.x · DOI
  22. Gori, 2007, Ammonia production and its possible role as a mediator of communication for Debaryomyces hansenii and other cheese-relevant yeast species, Journal of Dairy Science, 90, 5032, 10.3168/jds.2006-750 · DOI
  23. Husen, 2008, Prospective use of 1-aminocyclopropane-1-carboxylate deaminase-producing bacteria for plant growth promotion and defense against biotic and abiotic stresses in peat-soil-agriculture, Microbiology Indonesia, 2, 107, 10.5454/mi.2.3.2 · DOI
  24. Jijakli, 1998, Characterization of an exo-β-1,3-glucanase produced by Pichia anomala strain K, antagonist of Botrytis cinerea on apples, Biological Control, 88, 335
  25. Joseph, 2007, Characterization of plant growth promoting rhizobacteria associated with chickpea (Cicer arietinum L.), International Journal of Plant Production, 2, 141
  26. Kim, 2006, HPLC-based quantification of indole-3-acetic acid in the primary root tip of maize, Journal of Nano and Biotech, 3, 40
  27. Kurtzman, 1998, Identification and phylogeny of ascomycete yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences, Antonie Van Leeuwenhoek, 73, 331, 10.1023/A:1001761008817 · DOI
  28. Limtong, 2012, Yeasts from phylloplane and their capability to produce indole-3-acetic acid, World Journal of Microbiology and Biotechnology, 28, 3323, 10.1007/s11274-012-1144-9 · DOI
  29. Limtong, 2007, Kazachstania siamensis sp. nov., an ascomycetous yeast species from forest soil in Thailand, International Journal of Systematic and Evolutionary Microbiology, 57, 419, 10.1099/ijs.0.64539-0 · DOI
  30. Mangunwardoyo, 2011, Screening cellulose activity of yeast isolated from soil, sediment and water river from Taman Nasional Gunung Halimun, West Java, Indonesia, Malaysian Journal of Microbiology, 7, 210
  31. Michelsen, 2012, Hydrogen cyanide synthesis and antifungal activity of the biocontrol strain Pseudomonas fluorescens In5 from Greenland is highly dependent on growth medium, Canadian Journal of Microbiology, 58, 381, 10.1139/w2012-004 · DOI
  32. Minami, 1998, Properties, sequence, and synthesis in Escherichia coli of 1-aminocyclopropane-1-carboxylate deaminase from Hansenula saturnus, Journal of Biochemistry, 123, 1112, 10.1093/oxfordjournals.jbchem.a022050 · DOI
  33. Nakase, 1986, Bullera derxii sp. nov. and Bullera pseudoalba sp. nov. isolated from dead leaves of Oryza sativa and Miscanthus sinensis, The Journal of General and Applied Microbiology, 32, 125, 10.2323/jgam.32.125 · DOI
  34. Nassar, 2005, Promotion of plant growth by an auxin-producing isolate of the yeast Williopsis saturnus endophytic in maize (Zea mays L.) roots, Biology and Fertility of Soils, 42, 97, 10.1007/s00374-005-0008-y · DOI · Paper page
  35. Palmer, 2007, ACC deaminase from Issatchenkia occidentalis, Journal of Biological Sciences, 7, 188, 10.3923/jbs.2007.188.193 · DOI
  36. Parachin, 2009, Xylanases from Cryptococcus flavus isolate I-11: enzymatic profile, isolation and heterologous expression of CfXYN1 in Saccharomyces cerevisiae, Journal of Molecular Catalysis B: Enzymatic, 59, 52, 10.1016/j.molcatb.2008.12.018 · DOI
  37. Reyes-Becerril, 2011, Polyamine determination in different strains of the yeast Debaryomyces hansenii by high pressure liquid chromatography, Food Chemistry, 127, 1862, 10.1016/j.foodchem.2011.02.006 · DOI
  38. Rokhbakhsh-Zamin, 2011, Characterization of plant-growth-promoting traits of Acinetobacter species isolated from rhizosphere of Pennisetum glaucum, Journal of Microbiology and Biotechnology, 21, 556, 10.4014/jmb.1012.12006 · DOI
  39. Rosa, 2010, Evaluation of the biological control by the yeast Torulaspora globosa against Colletotrichum sublineolum in sorghum, World Journal of Microbiology and Biotechnology, 26, 1491, 10.1007/s11274-010-0324-8 · DOI
  40. Saligkarias, 2002, Biological control of Botrytis cinerea on tomato plants by use of epiphytic yeasts Candida guilliermondii strains 1001 and US 7 and Candida oleophila strain I-182: II. A study on mode of action, Biological Control, 25, 151, 10.1016/S1049-9644(02)00052-X · DOI
  41. Samuel, 2011, Characterization of plant growth promoting rhizobacteria and fungi associated with rice, mangrove and effluent contaminated soil, Current Botany, 2, 22
  42. Sansone, 2005, Control of Botrytis cinerea strains resistant to iprodione in apple with rhodotorulic acid and yeasts, Postharvest Biology and Technology, 35, 245, 10.1016/j.postharvbio.2004.09.005 · DOI
  43. Sasikala, 1998, Biodegradation and metabolism of unusual carbon compounds by anoxygenic phototrophic bacteria, Advances in Microbial Physiology, 39, 339, 10.1016/S0065-2911(08)60020-X · DOI
  44. Schwyn, 1987, Universal chemical assay for the detection and determination of siderophores, Analytical Chemistry, 160, 47
  45. Sessitsch, 2005, Burkholderia phytofirmins sp. nov., a novel plant-associated bacterium with plant beneficial properties, International Journal of Systematic and Evolutionary Microbiology, 55, 1187, 10.1099/ijs.0.63149-0 · DOI · Paper page
  46. Shanmugaiah, 2008, Optimization of cultural conditions for production of chitinase by Bacillus laterosporous MML2270 isolated from rice rhizosphere soil, African Journal of Biotechnology, 7, 2562
  47. Sun, 2009, The presence of a 1-aminocyclopropane-1-carboxylate (ACC) deaminase deletion mutation alters the physiology of the endophytic plant growth-promoting bacterium Burkholderia phytofirmans PSJN, FEMS Microbiology Letters, 296, 131, 10.1111/j.1574-6968.2009.01625.x · DOI
  48. Tang, 2005, Polyamines promote root elongation and growth by increasing root cell division in regenerated Virginia pine (Pinus virginiana Mill.) plantlets, Plant Cell Reports, 24, 581, 10.1007/s00299-005-0021-5 · DOI
  49. Teale, 2006, Auxin in action: signaling, transport and the control of plant growth and development, Nature Reviews Molecular Cell Biology, 7, 847, 10.1038/nrm2020 · DOI
  50. Trotsenko, 2001, Aerobic methylotrophic bacteria as phytosymbionts, Microbiology, 70, 623, 10.1023/A:1013167612105 · DOI
  51. Vessey, 2003, Plant growth promoting rhizobacteria as biofertilizers, Plant and Soil, 255, 571, 10.1023/A:1026037216893 · DOI
  52. Wanderley, 2004, Biochemical characterization of α-amylase from the yeast Cryptococcus flavus, FEMS Microbiology Letters, 231, 165, 10.1016/S0378-1097(03)00955-8 · DOI
  53. Wang, 2008, FEMS Yeast Research, 8, 799, 10.1111/j.1567-1364.2008.00403.x · DOI
  54. Wang, 2009, Siderophore production by the marine derived Aureobasidium pullulans and its antimicrobial activity, Bioresource Technology, 100, 2639, 10.1016/j.biortech.2008.12.010 · DOI
  55. Wang, 2010, Control of postharvest decay on cherry tomatoes by marine yeast Rhodosporidium paludigenum and calcium chloride, Journal of Applied Microbiology, 109, 651, 10.1111/j.1365-2672.2010.04693.x · DOI
  56. White, 1997, Microbial solubilization and immobilization of toxic metals: key biogeochemical processes for treatment of contamination, FEMS Microbiology Reviews, 20, 503, 10.1111/j.1574-6976.1997.tb00333.x · DOI
  57. Xin, 2009, Characterization of three endophytic, indole-3-acetic acid producing yeasts occurring in Populus trees, Mycological Research, 3, 973, 10.1016/j.mycres.2009.06.001 · DOI
  58. Yang, 2013, Effect of marine red yeast Rhodosporidium paludigenum on antioxidant-related gene expression in Litopenaeus vannamei, The Israeli Journal of Aquaculture-Bamidgeh, 65, 817
  59. Yang, 2010, Effect of marine red yeast Rhodosporidium paludigenum on growth and antioxidant competence of Litopenaeus vannamei, Aquaculture, 309, 62, 10.1016/j.aquaculture.2010.09.032 · DOI
  60. Yimyoo, 2011, Carotenoid production by Rhodosporidium paludigenum DMKU3-LPK4 using glycerol as the carbon source, Kasetsart Journal (Natural Science), 45, 90
  61. Yu, 2013, Effect of pyrimethanil on Cryptococcus laurentii, Rhodosporidium paludigenum, and Rhodotorula glutinis biocontrol of Penicillium expansum infection in pear fruit, International Journal of Food Microbiology, 164, 155, 10.1016/j.ijfoodmicro.2013.04.012 · DOI
  62. Yu, 2008, Biocontrol of Botrytis cinerea in apple fruit by Cryptococcus laurentii and indole-3-acetic acid, Biological Control, 46, 171, 10.1016/j.biocontrol.2008.04.008 · DOI
  63. Zaidi, 2006, Significance of Bacillus subtilis strain SJ-101 as a bioinoculant for concurrent plant growth promotion and nickel accumulation in Brassica juncea, Chemosphere, 64, 991, 10.1016/j.chemosphere.2005.12.057 · DOI

Cited by

Sorted by citations

Metadata

Authors
Nutaratat, P., Srisuk, N., Arunrattiyakorn, P., & Limtong, S.
Affiliations
  • Kasetsart University (TH)
  • Srinakharinwirot University (TH)
Corresponding author
Srisuk, Nantana
ORCID
Venue
Fungal Biology
Publisher
Elsevier BV
Published
2014-08
Volume
118
Issue
8
Pages
683-694
ISSN
1878-6146 (ISSN-L)
DOI
10.1016/j.funbio.2014.04.010
OpenAlex
W1999055243
Cited by
147
References
0
Citations by year
2026: 6 · 2025: 8 · 2024: 14 · 2023: 14 · 2022: 21 · 2021: 11 · 2020: 20 · 2019: 15 · 2018: 9 · 2017: 12 · 2016: 9 · 2015: 7 · 2014: 1
FWCI
11.28
Type
journal article
Language
en
Open access
closed
Licence
www.elsevier.com/tdm/userlicense/1.0/ (tdm)
Locations
  • Fungal Biology (publishedVersion)
  • PubMed (publishedVersion)
Funders
Thailand Research Fund (RTA 548009)
Topics
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant-Microbe Interactions and Immunity
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Growth Enhancement Techniques
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Agriculture, Plant Science, Crop Management
Keywords
indole-3-acetic acid production, siderophore production, nitrogen fixation, ACC deaminase, catalase, plant growth-promoting traits, endoglucanase
MeSH terms
Ammonia, Calcium Phosphates, Catalase, Indoleacetic Acids, Plant Growth Regulators, Polyamines, Oryza, Thailand, Yeasts, Zinc Oxide, Siderophores, Plant Leaves, Saccharum, Endophytes, Plant Development

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review