The DOI matches its Crossref record; 18 of the 18 references it cites were found in a registry or an index.
A new version of the grapevine reference genome assembly (12X.v2) and of its annotation (VCost.v3)
Open accessAbstract
National de la Recherche Agronomique (INRA), respectively the Service Experimentation Agricole et Viticole (Colmar, France) and the Domaine de Vassal (Marseillan-Plage, France).The Ch × Bi population and the V. vinifera cv.Kishmish vatkana variety (VIVC no.6277) were maintained in the germplasm collection of the University of Udine at the Experimental Farm A. Servadei (Udine, Italy).
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Fast gapped-read alignment with Bowtie 2
Langmead, B., & Salzberg, S. L. (2012) · Nature Methods · doi:10.1038/nmeth.1923 · Cited by 56,400
Cutadapt removes adapter sequences from high-throughput sequencing reads
Martin, M. (2011) · EMBnet.journal · doi:10.14806/ej.17.1.200 · Cited by 33,889
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
Thorvaldsdottir, H., Robinson, J. T., & Mesirov, J. P. (2013) · Briefings in Bioinformatics · doi:10.1093/bib/bbs017 · Cited by 9,049
<tt>BLAT</tt> —The <tt>BLAST</tt> -Like Alignment Tool
Kent, W. J. (2002) · Genome Research · doi:10.1101/gr.229202 · Cited by 8,480
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
The French–Italian Public Consortium for Grapevine Genome Characterization (2007) · Nature · doi:10.1038/nature06148 · Cited by 3,767
R/qtl: QTL mapping in experimental crosses
Broman, K. W., Wu, H., Sen, Ś., & Churchill, G. A. (2003) · Bioinformatics · doi:10.1093/bioinformatics/btg112 · Cited by 3,463
An Extensive Evaluation of Read Trimming Effects on Illumina NGS Data Analysis
Del Fabbro, C., Scalabrin, S., Morgante, M., & Giorgi, F. M. (2013) · PLoS ONE · doi:10.1371/journal.pone.0085024 · Cited by 475
Self-citationMartin, D. M., Aubourg, S., Schouwey, M. B., Daviet, L., Schalk, M., Toub, O., Lund, S. T., & Bohlmann, J. (2010) · BMC Plant Biology · doi:10.1186/1471-2229-10-226 · Cited by 460
Sequence Mapping by Electronic PCR
Schuler, G. D. (1997) · Genome Research · doi:10.1101/gr.7.5.541 · Cited by 373
Vitulo, N., Forcato, C., Carpinelli, E. C., Telatin, A., Campagna, D., D'Angelo, M., Zimbello, R., Corso, M., Vannozzi, A., Bonghi, C., et al. (2014) · BMC Plant Biology · doi:10.1186/1471-2229-14-99 · Cited by 251
Cited by
The population genetics of structural variants in grapevine domestication
Zhou, Y., Minio, A., Massonnet, M., Solares, E., Lv, Y., Beridze, T., Cantu, D., & Gaut, B. S. (2019) · Nature Plants · doi:10.1038/s41477-019-0507-8 · Cited by 339
Metadata
- Authors
- Canaguier, A., Grimplet, J., Di Gaspero, G., Scalabrin, S., Duchêne, E., Choisne, N., Mohellibi, N., Guichard, C., Rombauts, S., Le Clainche, I., Bérard, A., Chauveau, A., Bounon, R., Rustenholz, C., Morgante, M., Le Paslier, M.-C., Brunel, D., & Adam-Blondon, A.-F.
- Venue
- Genomics Data
- Publisher
- Elsevier BV
- Published
- 2017-12
- Volume
- 14
- Pages
- 56-62
- ISSN
- 2213-5960 (ISSN-L)
- OpenAlex
- W2754094601
- Cited by
- 322
- References
- 18
- FWCI
- 18.50
- Type
- journal article
- Language
- en
- Open access
- gold
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: A new version of the grapevine reference genome assembly (12X.v2) and of its annotation (VCost.v3). https://app.cochat.ai/papers/10.1016/j.gdata.2017.09.002
- The paper
- Canaguier, A., Grimplet, J., Di Gaspero, G., Scalabrin, S., Duchêne, E., Choisne, N., Mohellibi, N., Guichard, C., Rombauts, S., Le Clainche, I., Bérard, A., Chauveau, A., Bounon, R., Rustenholz, C., Morgante, M., Le Paslier, M.-C., Brunel, D., & Adam-Blondon, A.-F. (2017). A new version of the grapevine reference genome assembly (12X.v2) and of its annotation (VCost.v3). Genomics Data. https://doi.org/10.1016/j.gdata.2017.09.002
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.