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Automation of 3D reconstruction of neural tissue from large volume of conventional serial section transmission electron micrographs
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“The nanometer scale is required to identify individual synapses and distinguish tightly-packed axonal and dendritic processes from one another (58).”
From A petavoxel fragment of human cerebral cortex reconstructed at nanoscale resolution (2024) · cites this paper as [58]
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Cites
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“(Compare this with 5-10mm of axonal wire present in a typical cube of mammalian neuropil of 1000μm(3) and 20-40mm of axonal wire in a typical axonal arbor of single pyramidal neuron (Braitenberg and Schuz, 1998).”
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Cited by
Sorted by citations
Saturated Reconstruction of a Volume of Neocortex
Kasthuri, N., Hayworth, K. J., Berger, D. R., Schalek, R. L., Conchello, J. A., Knowles-Barley, S., Lee, D., Vázquez-Reina, A., Kaynig, V., Jones, T. R., et al. (2015) · Cell · doi:10.1016/j.cell.2015.06.054 · Cited by 1,044
Cardona, A., Saalfeld, S., Preibisch, S., Schmid, B., Cheng, A., Pulokas, J., Tomancak, P., & Hartenstein, V. (2010) · PLoS Biology · doi:10.1371/journal.pbio.1000502 · Cited by 372
A petavoxel fragment of human cerebral cortex reconstructed at nanoscale resolution
Shapson-Coe, A., Januszewski, M., Berger, D. R., Pope, A., Wu, Y., Blakely, T., Schalek, R. L., Li, P. H., Wang, S., Maitin-Shepard, J., et al. (2024) · Science · doi:10.1126/science.adk4858 · Cited by 361
A connectomic study of a petascale fragment of human cerebral cortex
Shapson-Coe, A., Januszewski, M., Berger, D. R., Pope, A., Wu, Y., Blakely, T., Schalek, R. L., Li, P. H., Wang, S., Maitin-Shepard, J., et al. (2021) · doi:10.1101/2021.05.29.446289 · Cited by 243
A survey of methods for 3D histology reconstruction
Pichat, J., Iglesias, J. E., Yousry, T., Ourselin, S., & Modat, M. (2018) · Medical Image Analysis · doi:10.1016/j.media.2018.02.004 · Cited by 207
Metadata
- Authors
- Mishchenko, Y.
- Venue
- Journal of Neuroscience Methods
- Publisher
- Elsevier BV
- Published
- 2009-01
- Volume
- 176
- Issue
- 2
- Pages
- 276-289
- ISSN
- 0165-0270
- Cited by
- 73
- References
- 3
- Language
- en
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- Mishchenko, Y. (2009). Automation of 3D reconstruction of neural tissue from large volume of conventional serial section transmission electron micrographs. Journal of Neuroscience Methods. https://doi.org/10.1016/j.jneumeth.2008.09.006
