The evolution of the ligand/receptor couple: a long road from comparative endocrinology to comparative genomics
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Comparative endocrinology considers the evolution of bioregulatory systems and the anatomical structures and molecules that constitute the neuroendocrine and endocrine systems. One aim of comparative endocrinology is to trace the origins of the main endocrine systems. The understanding of the evolution of the ligand/receptor couple is central to this objective. One classical approach to tackle this question is the characterization of receptors and ligands in various types of non-model organisms using as a starting point the knowledge accumulated on classical models such as mammals (mainly human and mouse) and arthropods (with Drosophila among other insects). In this review we discuss the potential caveats associated to this two-by-two comparison between a classical model and non-model organisms. We suggest that the use of an evolutionary approach involving comparisons of several organisms in a coherent framework permits reconstruction of the most probable scenarios. The use of the vast amount of genomic data now available, coupled to functional experiments, offers unprecedented possibilities to trace back the origins of the main ligand/receptor couples.
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Studying the OT/AVP nonapeptide family and the corresponding structure of their cognate receptors serves as an interesting test case in ligand-receptor coevolution, given the long evolutionary history of these peptide systems (~600 million years) and evolutionary changes in ligand structure.
“Studying the OT/AVP nonapeptide family and the corresponding structure of their cognate receptors serves as an interesting test case in ligand-receptor coevolution (Markov et al., 2008), given the long evolutionary history of these peptide systems (~600 million years) and evolutionary changes in ligand structure.”
From Neuropeptide diversity and the regulation of social behavior in New World primates (2016) · cites this paper as Markov et al., 2008
Cites
Ohno, S. (1970) · doi:10.1007/978-3-642-86659-3 · Cited by 7,833 · see citing works
Preservation of Duplicate Genes by Complementary, Degenerative Mutations
Force, A., Lynch, M., Pickett, F. B., Amores, A., Yan, Y.-L., & Postlethwait, J. (1999) · Genetics · doi:10.1093/genetics/151.4.1531 · Cited by 3,529 · see citing works
A transmembrane intracellular estrogen receptor mediates rapid cell signaling
Revankar, C. M., Cimino, D. F., Sklar, L. A., Arterburn, J. B., & Prossnitz, E. R. (2005) · Science · doi:10.1126/science.1106943 · Cited by 2,302 · see citing works
Jaillon, O., Aury, J.-M., Brunet, F., Petit, J.-L., Stange-Thomann, N., Mauceli, E., Bouneau, L., Fischer, C., Ozouf-Costaz, C., Bernot, A., et al. (2004) · Nature · doi:10.1038/nature03025 · Cited by 1,966 · see citing works
Self-citationSea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization
Putnam, N. H., Srivastava, M., Hellsten, U., Dirks, B., Chapman, J., Salamov, A., Terry, A., Shapiro, H., Lindquist, E., Kapitonov, V. V., et al. (2007) · Science · doi:10.1126/science.1139158 · Cited by 1,555 · see citing works
Two Rounds of Whole Genome Duplication in the Ancestral Vertebrate
Dehal, P., & Boore, J. L. (2005) · PLoS Biology · doi:10.1371/journal.pbio.0030314 · Cited by 1,526 · see citing works
Molecular and Cellular Endocrinology
Rainey, W. E., & Rodgers, R. J. (2004) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2004.10.007 · Cited by 1,309 · see citing works
Phylogenomics and the reconstruction of the tree of life
Delsuc, F., Brinkmann, H., & Philippe, H. (2005) · Nature Reviews Genetics · doi:10.1038/nrg1603 · Cited by 1,228 · see citing works
The medaka draft genome and insights into vertebrate genome evolution
Kasahara, M., Naruse, K., Sasaki, S., Nakatani, Y., Qü, W., Ahsan, B., Yamada, T., Nagayasu, Y., Doi, K., Kasai, Y., et al. (2007) · Nature · doi:10.1038/nature05846 · Cited by 1,126 · see citing works
Forkhead Transcription Factors: Key Players in Development and Metabolism
Carlsson, P., & Mahlapuu, M. (2002) · Developmental Biology · doi:10.1006/dbio.2002.0780 · Cited by 842 · see citing works
Resurrecting the Ancestral Steroid Receptor: Ancient Origin of Estrogen Signaling
Thornton, J. W., Need, E. F., & Crews, D. P. (2003) · Science · doi:10.1126/science.1086185 · Cited by 700 · see citing works
Thornton, J. W. (2001) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.091553298 · Cited by 674 · see citing works
Genome evolution and biodiversity in teleost fish
Volff, J. (2004) · Heredity · doi:10.1038/sj.hdy.6800635 · Cited by 671 · see citing works
Evolution of Hormone-Receptor Complexity by Molecular Exploitation
Bridgham, J. T., Carroll, S. M., & Thornton, J. W. (2006) · Science · doi:10.1126/science.1123348 · Cited by 601 · see citing works
Archetypal organization of the amphioxus Hox gene cluster
García‐Fernàndez, J., & Holland, P. W. H. (1994) · Nature · doi:10.1038/370563a0 · Cited by 581 · see citing works
Laudet, V (1997) · Journal of Molecular Endocrinology · doi:10.1677/jme.0.0190207 · Cited by 557 · see citing works
Self-citationThe amphioxus genome illuminates vertebrate origins and cephalochordate biology
Holland, L. Z., Albalat, R., Azumi, K., Benito-Gutiérrez, È., Blow, M. J., Bronner-Fraser, M., Brunet, F., Butts, T., Candiani, S., Dishaw, L. J., et al. (2008) · Genome Research · doi:10.1101/gr.073676.107 · Cited by 512 · see citing works
Self-citationIdentification of Ligands for DAF-12 that Govern Dauer Formation and Reproduction in C. elegans
Motola, D., Cummins, C. L., Rottiers, V., Sharma, K. K., Li, T., Li, Y., Suino-Powell, K. M., Xu, H. E., Auchus, R. J., Antebi, A., et al. (2006) · Cell · doi:10.1016/j.cell.2006.01.037 · Cited by 487 · see citing works
Ligand binding was acquired during evolution of nuclear receptors
Escrivá, H., Safi, R., Hänni, C., Langlois, M., Saumitou‐Laprade, P., Stéhelin, D., Capron, A., Pierce, R. J., & Laudet, V. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.13.6803 · Cited by 403 · see citing works
Self-citationResurrecting ancient genes: experimental analysis of extinct molecules
Thornton, J. W. (2004) · Nature Reviews Genetics · doi:10.1038/nrg1324 · Cited by 399 · see citing works
J., A., & Ohno, S. (1971) · Population · doi:10.2307/1530208 · Cited by 399 · see citing works
Mechanistic approaches to the study of evolution: the functional synthesis
Dean, A. M., & Thornton, J. W. (2007) · Nature Reviews Genetics · doi:10.1038/nrg2160 · Cited by 354 · see citing works
Bertrand, S., Brunet, F., Escrivá, H., Parmentier, G., Laudet, V., & Robinson‐Rechavi, M. (2004) · Molecular Biology and Evolution · doi:10.1093/molbev/msh200 · Cited by 344 · see citing works
Self-citationCo-evolution of ligand-receptor pairs
Moyle, W. R., Campbell, R. K., Myers, R. V., Bernard, M. P., Han, Y., & Wang, X. (1994) · Nature · doi:10.1038/368251a0 · Cited by 339 · see citing works
(2013) · Elsevier eBooks · doi:10.1016/c2011-0-05167-0 · Cited by 330 · see citing works
The Nuclear Receptor FactsBook
(2002) · Elsevier eBooks · doi:10.1016/b978-0-12-437735-6.x5000-0 · Cited by 315 · see citing works
A Melanocortin 1 Receptor Allele Suggests Varying Pigmentation Among Neanderthals
Lalueza-Fox, C., Römpler, H., Caramelli, D., Stäubert, C., Catalano, G., Hughes, D., Rohland, N., Pilli, E., Longo, L., Condemi, S., et al. (2007) · Science · doi:10.1126/science.1147417 · Cited by 292 · see citing works
Simionato, E., Ledent, V., Richards, G. S., Thomas‐Chollier, M., Kerner, P., Coornaert, D., Degnan, B. M., & Vervoort, M. (2007) · BMC Evolutionary Biology · doi:10.1186/1471-2148-7-33 · Cited by 286 · see citing works
Steroids in aquatic invertebrates
Lafont, R., & Mathieu, M. (2007) · Ecotoxicology · doi:10.1007/s10646-006-0113-1 · Cited by 284 · see citing works
Wittbrodt, J., Meyer, A., & Schartl, M. (1998) · BioEssays · doi:10.1002/(sici)1521-1878(199806)20:6 · Cited by 283 · see citing works
Mic, F., Molotkov, A., Benbrook, D., & Duester, G. (2003) · Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.1231422100 · Cited by 242 · see citing works
Timing and mechanism of ancient vertebrate genome duplications – the adventure of a hypothesis
PANOPOULOU, G., & Poustka, A. J. (2005) · Trends in Genetics · doi:10.1016/j.tig.2005.08.004 · Cited by 231 · see citing works
The evolution of the nuclear receptor superfamily
Escrivá, H., Bertrand, S., & Laudet, V. (2004) · Essays in Biochemistry · doi:10.1042/bse0400011 · Cited by 214 · see citing works
Self-citationKeay, J., Bridgham, J. T., & Thornton, J. W. (2006) · Endocrinology · doi:10.1210/en.2006-0363 · Cited by 211 · see citing works
Bertrand, S., Thisse, B., Tavares, R., Sachs, L. M., Chaumot, A., Bardet, P., Escrivá, H., Duffraisse, M., Marchand, O., Safi, R., et al. (2007) · PLoS Genetics · doi:10.1371/journal.pgen.0030188 · Cited by 208 · see citing works
Self-citationRapid Birth-Death Evolution Specific to Xenobiotic Cytochrome P450 Genes in Vertebrates
Thomas, J. H. (2005) · PLoS Genetics · doi:10.1371/journal.pgen.0030067 · Cited by 181 · see citing works
Kloviņš, J., Haitina, T., Frīdmanis, D., Kilianova, Z., Kāpa, I., Fredriksson, R., Gallo‐Payet, N., & Schiöth, H. B. (2004) · Molecular Biology and Evolution · doi:10.1093/molbev/msh050 · Cited by 173 · see citing works
Nuclear receptors in nematodes: themes and variations
Sluder, A. E. (2001) · Trends in Genetics · doi:10.1016/s0168-9525(01)02242-9 · Cited by 157 · see citing works
Steroid hormone biotransformation and xenobiotic induction of hepatic steroid metabolizing enzymes
You, L. (2004) · Chemico-Biological Interactions · doi:10.1016/j.cbi.2004.01.006 · Cited by 145 · see citing works
Explosive Lineage-Specific Expansion of the Orphan Nuclear Receptor HNF4 in Nematodes
Robinson‐Rechavi, M., Maina, C. V., Gissendanner, C. R., Laudet, V., & Sluder, A. E. (2005) · Journal of Molecular Evolution · doi:10.1007/s00239-004-0175-8 · Cited by 141 · see citing works
Self-citationAmphioxus Postembryonic Development Reveals the Homology of Chordate Metamorphosis
Paris, M., Escrivá, H., Schubert, M., Brunet, F., Brtko, J., Ciesielski, F., Roecklin, D., Vivat, V., Jamin, E. L., Cravedi, J., et al. (2008) · Current Biology · doi:10.1016/j.cub.2008.04.078 · Cited by 138 · see citing works
Self-citationStructural and functional characterization of a novel type of ligand‐independent RXR‐USP receptor
Iwema, T., Billas, I. M. L., Beck, Y., Bonneton, F., Nierengarten, H., Chaumot, A., Richards, G., Laudet, V., & Moras, D. (2007) · The EMBO Journal · doi:10.1038/sj.emboj.7601810 · Cited by 135 · see citing works
Self-citationCharacterization and regulation of UDP-glucuronosyltransferases in steroid target tissues
Bélanger, A., Hum, D. W., Beaulieu, M., Lévesque, É., Guillemette, C., Tchernof, A., Bélanger, G., Turgeon, D., & Dubois, S. (1998) · The Journal of Steroid Biochemistry and Molecular Biology · doi:10.1016/s0960-0760(97)00183-0 · Cited by 131 · see citing works
Caenorhabditis elegans Has Scores of hedgehogRelated Genes: Sequence and Expression AnalysisPreprint
Aspöck, G., Kagoshima, H., Niklaus, G., & Bürglin, T. R. (1999) · Genome Research · doi:10.1101/gr.9.10.909 · Cited by 130 · see citing works
Evolution of secretin family GPCR members in the metazoa
Cardoso, J. C. R., Pinto, V., Vieira, F. A., Clark, M. S., & Power, D. M. (2006) · BMC Evolutionary Biology · doi:10.1186/1471-2148-6-108 · Cited by 123 · see citing works
Fish genomics and biologyPreprint
Crollius, H. R., & Weissenbach, J. (2005) · Genome Research · doi:10.1101/gr.3735805 · Cited by 123 · see citing works
Calleja, C., Messaddeq, N., Chapellier, B., Yang, H., Krężel, W., Li, M., METZGER, D., Mascrez, B., Ohta, K., Kagechika, H., et al. (2006) · Genes & Development · doi:10.1101/gad.368706 · Cited by 123 · see citing works
Neofunctionalization in Vertebrates: The Example of Retinoic Acid Receptors
Escrivá, H., Bertrand, S., Germain, P., Robinson‐Rechavi, M., Umbhauer, M., Cartry, J., Duffraisse, M., Holland, L. Z., Gronemeyer, H., & Laudet, V. (2006) · PLoS Genetics · doi:10.1371/journal.pgen.0020102 · Cited by 122 · see citing works
Self-citationTissue preferential expression of estrogen receptor gene in the marine snail, Thais clavigera
Kajiwara, M., Kuraku, S., Kurokawa, T., Kato, K., Toda, S., Hirose, H., Takahashi, S., Shibata, Y., Iguchi, T., Matsumoto, T., et al. (2006) · General and Comparative Endocrinology · doi:10.1016/j.ygcen.2006.03.016 · Cited by 120 · see citing works
Plant signals and fungal perception during arbuscular mycorrhiza establishment
Requena, N., Serrano, E., Ocón, A., & Breuninger, M. (2006) · Phytochemistry · doi:10.1016/j.phytochem.2006.09.036 · Cited by 119 · see citing works
Evolution of the pregnane x receptor: adaptation to cross-species differences in biliary bile salts
Krasowski, M. D., Yasuda, K., Hagey, L. R., & Schuetz, E. G. (2005) · Molecular Endocrinology · doi:10.1210/me.2004-0427 · Cited by 115 · see citing works
Madani, N. D., Malloy, P. J., Rodríguez‐Pombo, P., Krishnan, A. V., & Feldman, D. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.3.922 · Cited by 114 · see citing works
Oyster estrogen receptor: cDNA cloning and immunolocalization
Matsumoto, T., Nakamura, A. M., Mori, K., Akiyama, I., Hirose, H., & Takahashi, Y. K. (2007) · General and Comparative Endocrinology · doi:10.1016/j.ygcen.2007.01.016 · Cited by 112 · see citing works
Environmental signals and cell fate specification in premigratory neural crest
Dorsky, R. I., Moon, R. T., & Raible, D. W. (2000) · BioEssays · doi:10.1002/1521-1878(200008)22:8 · Cited by 111 · see citing works
Self-citationOgasawara, M. (2000) · Development Genes and Evolution · doi:10.1007/s004270050309 · Cited by 107 · see citing works
Functional evolution of the vitamin D and pregnane X receptors
Reschly, E. J., Bainy, A. C. D., Mattos, J. J., Hagey, L. R., Bahary, N., Mada, S. R., Ou, J., Venkataramanan, R., & Krasowski, M. D. (2007) · BMC Evolutionary Biology · doi:10.1186/1471-2148-7-222 · Cited by 106 · see citing works
Evolution of adrenal and sex steroid action in vertebrates: a ligand‐based mechanism for complexity
Baker, M. E. (2003) · BioEssays · doi:10.1002/bies.10252 · Cited by 106 · see citing works
Schweitzer, M. H., Watt, J. A., Avci, R., Knapp, L. W., Chiappe, L. M., Norell, M. A., & Marshall, M. (1999) · Journal of Experimental Zoology · doi:10.1002/(sici)1097-010x(19990815)285:2 · Cited by 99 · see citing works
Occurrence of Sex Steroid Hormones and Their Binding Proteins inOctopus vulgarisLam
D’Aniello, A., Cosmo, A. D., Cristo, C. D., Assisi, L., Botte, V., & Fiore, M. M. D. (1996) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.1996.1585 · Cited by 99 · see citing works
Cosmo, A. D., Cristo, C. D., & Paolucci, M. (2001) · Journal of Experimental Zoology · doi:10.1002/1097-010x(20010101/31)289:1 · Cited by 96 · see citing works
Cellular and Molecular Biology of Candida albicans Estrogen Response
Cheng, G., Yeater, K. M., & Hoyer, L. L. (2006) · Eukaryotic Cell · doi:10.1128/ec.5.1.180-191.2006 · Cited by 96 · see citing works
Minireview: Structural and Functional Evolution of the Thyrotropin Receptor
Farid, N. R., & Szkudlinski, M. W. (2004) · Endocrinology · doi:10.1210/en.2004-0437 · Cited by 93 · see citing works
Presence of Sex Steroids and Cytochrome P450 Genes in Amphioxus
Mizuta, T., & Kubokawa, K. (2007) · Endocrinology · doi:10.1210/en.2007-0109 · Cited by 88 · see citing works
Paris, M., Pettersson, K., Schubert, M., Bertrand, S., Pongratz, I., Escrivá, H., & Laudet, V. (2008) · BMC Evolutionary Biology · doi:10.1186/1471-2148-8-219 · Cited by 87 · see citing works
Self-citationBonneton, F. (2003) · Molecular Biology and Evolution · doi:10.1093/molbev/msg054 · Cited by 85 · see citing works
Thyroid hormone metabolism and peroxidase function in two non‐chordate animals
Heyland, A., Price, D. A., Bodnárová, M., & Moroz, L. L. (2006) · Journal of Experimental Zoology Part B Molecular and Developmental Evolution · doi:10.1002/jez.b.21113 · Cited by 80 · see citing works
Quantification of ortholog losses in insects and vertebrates
Wyder, S., Kriventseva, E. V., Schröder, R., Kadowaki, T., & Zdobnov, E. M. (2007) · Genome biology · doi:10.1186/gb-2007-8-11-r242 · Cited by 76 · see citing works
Thyroid hormone receptor orthologues from invertebrate species with emphasis on Schistosoma mansoni
Wu, W., Niles, E. G., & LoVerde, P. T. (2007) · BMC Evolutionary Biology · doi:10.1186/1471-2148-7-150 · Cited by 75 · see citing works
Scervino, J. M., Ponce, M. A., Erra-Bassells, R., Horst Vierheilig, C., Ocampo, J. A., & Godeas, A. M. (2005) · Journal of Plant Physiology · doi:10.1016/j.jplph.2004.08.010 · Cited by 75 · see citing works
Catford, J.-G., Staehelin, C., Larose, G., Piché, Y., & Horst Vierheilig, C. (2006) · Plant and Soil · doi:10.1007/s11104-006-9012-8 · Cited by 75 · see citing works
Liu, J.-C., Makova, K. D., Adkins, R. M., Gibson, S., & Li, W. (2001) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a003895 · Cited by 73 · see citing works
Bonneton, F., Chaumot, A., & Laudet, V. (2008) · Insect Biochemistry and Molecular Biology · doi:10.1016/j.ibmb.2007.10.006 · Cited by 72 · see citing works
Self-citationThe search for non‐chordate retinoic acid signaling: lessons from chordates
Simões-Costa, M., Azambujá, A. P., & Xavier‐Neto, J. (2006) · Journal of Experimental Zoology Part B Molecular and Developmental Evolution · doi:10.1002/jez.b.21139 · Cited by 70 · see citing works
Bannister, R., Beresford, N., May, D., Routledge, E. J., Jobling, S., & Rand‐Weaver, M. (2007) · Environmental Science & Technology · doi:10.1021/es062565m · Cited by 68 · see citing works
Sex steroids and their receptors in lampreys
Bryan, M. B., Scott, A. P., & Li, W. (2007) · Steroids · doi:10.1016/j.steroids.2007.08.011 · Cited by 67 · see citing works
Lowartz, S. M., Petkam, R., Renaud, R., Beamish, F. W. H., Kime, D. E., RAESIDE, J. I., & Leatherland, J. F. (2003) · Comparative Biochemistry and Physiology Part A Molecular & Integrative Physiology · doi:10.1016/s1095-6433(02)00285-4 · Cited by 63 · see citing works
Therapeutic Potential of Retinoid X Receptor Modulators for the Treatment of the Metabolic Syndrome
Pinaire, J. A., & Reifel-Miller, A. E. (2007) · PPAR Research · doi:10.1155/2007/94156 · Cited by 62 · see citing works
Part of a Scientific Master Plan? Paul Ehrlich and the Origins of his Receptor Concept
Prüll, C. (2003) · Medical History · doi:10.1017/s0025727300057045 · Cited by 59 · see citing works
Diversifying the repertoire of G protein-coupled receptors through oligomerization
Park, P. S. ‐., & Palczewski, K. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0504016102 · Cited by 59 · see citing works
The genomic environment around the Aromatase gene: evolutionary insights
Castro, L. F. C., Santos, M. M., & Reis-Henriques, M. A. (2005) · BMC Evolutionary Biology · doi:10.1186/1471-2148-5-43 · Cited by 58 · see citing works
Response of Symbiotic Endomycorrhizal Fungi to Estrogens and Antiestrogens
Poulin, M.-J., Simard, J., Catford, J.-G., Librie, F., & Piché, Y. (1997) · Molecular Plant-Microbe Interactions · doi:10.1094/mpmi.1997.10.4.481 · Cited by 55 · see citing works
Pantalacci, S., Chaumot, A., Benoît, G., Sadier, A., Delsuc, F., Douzery, E., & Laudet, V. (2008) · Molecular Biology and Evolution · doi:10.1093/molbev/msn038 · Cited by 53 · see citing works
Self-citationCoevolution between cannabinoid receptors and endocannabinoid ligands
McPartland, J. M., Norris, R. W., & Kilpatrick, C. W. (2007) · Gene · doi:10.1016/j.gene.2007.04.017 · Cited by 51 · see citing works
Wu, W., Niles, E. G., El-Sayed, N. M., Berriman, M., & LoVerde, P. T. (2006) · Gene · doi:10.1016/j.gene.2005.09.013 · Cited by 51 · see citing works
Lagerström, M. C., Fredriksson, R., Bjarnadóttir, T. K., Frīdmanis, D., Holmquist, T., Andersson, J., Yan, Y., Raudsepp, T., Zoorob, R., Kukkonen, J. P., et al. (2005) · Genomics · doi:10.1016/j.ygeno.2005.02.007 · Cited by 49 · see citing works
Bonneton, F., Brunet, F., Kathirithamby, J., & Laudet, V. (2006) · Insect Molecular Biology · doi:10.1111/j.1365-2583.2006.00654.x · Cited by 49 · see citing works
Self-citationMacqueen, D. J., & Johnston, I. A. (2008) · PLoS ONE · doi:10.1371/journal.pone.0001567 · Cited by 48 · see citing works
Episodic Evolution of Protein Hormones in Mammals
Wallis, M. (2001) · Journal of Molecular Evolution · doi:10.1007/s002390010187 · Cited by 46 · see citing works
Bolduc, T. G., & Sower, S. A. (1992) · Journal of Experimental Zoology · doi:10.1002/jez.1402640109 · Cited by 45 · see citing works
Analysis of Rare Amino Acid Replacements Supports the Coelomata Clade
Rogozin, I. B., Wolf, Y. I., Carmel, L., & Koonin, E. V. (2007) · Molecular Biology and Evolution · doi:10.1093/molbev/msm218 · Cited by 45 · see citing works
Paleogenomics in vertebrates, or the recovery of lost genomes from the mist of time
Muffato, M., & Crollius, H. R. (2008) · BioEssays · doi:10.1002/bies.20707 · Cited by 44 · see citing works
Kime, D. E., & Callard, G. V. (1982) · General and Comparative Endocrinology · doi:10.1016/0016-6480(82)90208-8 · Cited by 37 · see citing works
Phylogenetic Methodology for Detecting Protein Interactions
Waddell, P. J., Kishino, H., & Ota, R. (2006) · Molecular Biology and Evolution · doi:10.1093/molbev/msl193 · Cited by 35 · see citing works
Presence of Estrogens and Estrogen Receptor-like Proteins in Solanum glaucophyllum
Milanesi, L. M., Monje, P. V., & Boland, R. (2001) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.2001.6079 · Cited by 33 · see citing works
Danchin, É., Gouret, P., & Pontarotti, P. (2006) · BMC Evolutionary Biology · doi:10.1186/1471-2148-6-5 · Cited by 32 · see citing works
Episodic evolution of prolactin receptor gene in mammals: coevolution with its ligand
Li, Y., Wallis, M., & Zhang, Y. (2005) · Journal of Molecular Endocrinology · doi:10.1677/jme.1.01798 · Cited by 31 · see citing works
Paralogy and Orthology of Tyrosine Kinases that Can Extend the Life Span of Caenorhabditis elegans
Rikke, B. A., Murakami, S., & Johnson, T. E. (2000) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a026346 · Cited by 31 · see citing works
Conservation of the MHC-like region throughout evolution
Danchin, É., Abi‐Rached, L., André Gilles, A., & Pontarotti, P. (2003) · Immunogenetics · doi:10.1007/s00251-003-0562-0 · Cited by 28 · see citing works
The planetary biology of cytochrome P450 aromatases
Gaucher, E. A., Graddy, L. G., Li, T., Simmen, R. C. M., Simmen, F. A., Schreiber, D., Liberles, D. A., Janis, C. M., & Benner, S. A. (2004) · BMC Biology · doi:10.1186/1741-7007-2-19 · Cited by 26 · see citing works
The Molecular Phylogeny of a Nematode-Specific Clade of Heterotrimeric G-Protein α-Subunit Genes
O’Halloran, D. M., Fitzpatrick, D. A., McCormack, G. P., McInerney, J. O., & Burnell, A. M. (2006) · Journal of Molecular Evolution · doi:10.1007/s00239-005-0215-z · Cited by 21 · see citing works
The “street light syndrome”, or how protein taxonomy can bias experimental manipulations
Markov, G. V., Lecointre, G., DEMENEIX, B. A., & Laudet, V. (2008) · BioEssays · doi:10.1002/bies.20730 · Cited by 19 · see citing works
Self-citationPersistence of duplicated PAC1 receptors in the teleost, Sparus auratus
Cardoso, J. C. R., de Vet, E. C. J. M., Louro, B., Elgar, G. S., Clark, M. S., & Power, D. M. (2007) · BMC Evolutionary Biology · doi:10.1186/1471-2148-7-221 · Cited by 19 · see citing works
Kakizawa, T., Nishio, S., Triqueneaux, G., Bertrand, S., Rambaud, J., & Laudet, V. (2007) · Journal of Molecular Endocrinology · doi:10.1677/jme-06-0063 · Cited by 18 · see citing works
Self-citationGene nomenclature by default, or BLASTing to Babel
Nelson, D. R. (2005) · Human Genomics · doi:10.1186/1479-7364-2-3-196 · Cited by 14 · see citing works
Immunoreactivity for progesterone in the giant Rohde cells of the amphioxus, Branchiostoma belcheri
Takeda, N., Kubokawa, K., & Matsumoto, G. (2003) · General and Comparative Endocrinology · doi:10.1016/s0016-6480(03)00099-6 · Cited by 10 · see citing works
Presence of vitamin D3 receptor (VDR)‐like proteins in Solanum glaucophyllum
Milanesi, L. M., & Boland, R. (2006) · Physiologia Plantarum · doi:10.1111/j.1399-3054.2006.00742.x · Cited by 9 · see citing works
Nicotiana tabacum Contains a Putative Mineralocorticoid Receptor
Agarwal, M. K., Mirshahi, M., Braq, S., Jullienne, A., Leblanc, N., Stibon, F., & Guern, J. (1994) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.1994.1582 · Cited by 5 · see citing works
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1 of the 108 references couldn’t be matched to a known paper.
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Independent elaboration of steroid hormone signaling pathways in metazoans
Markov, G. V., Tavares, R., Dauphin-Villemant, C., Demeneix, B. A., Baker, M. E., & Laudet, V. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0812138106 · Cited by 187 · see citing works
Self-citationWhat are nuclear receptor ligands?
Sladek, F. M. (2010) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2010.06.018 · Cited by 176 · see citing works
Plant Nuclear Hormone Receptors: A Role for Small Molecules in Protein-Protein Interactions
Lumba, S., Cutler, S. R., & McCourt, P. (2010) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev-cellbio-100109-103956 · Cited by 118 · see citing works
11-Deoxycortisol is a corticosteroid hormone in the lamprey
Close, D. A., Yun, S., McCormick, S. D., Wildbill, A. J., & Li, W. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0914026107 · Cited by 112 · see citing works
Origin and evolution of the ligand-binding ability of nuclear receptors
Markov, G. V., & Laudet, V. (2010) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2010.10.017 · Cited by 113 · see citing works
Self-citationThe history of a developmental stage: Metamorphosis in chordates
Paris, M., & Laudet, V. (2008) · genesis · doi:10.1002/dvg.20443 · Cited by 90 · see citing works
Self-citationParis, M., Pettersson, K., Schubert, M., Bertrand, S., Pongratz, I., Escrivá, H., & Laudet, V. (2008) · BMC Evolutionary Biology · doi:10.1186/1471-2148-8-219 · Cited by 87 · see citing works
Self-citationBisphenol A induces otolith malformations during vertebrate embryogenesis
Gibert, Y., Sassi-Messai, S., Fini, J., Bernard, L., Zalko, D., Cravedi, J., Balaguer, P., Andersson‐Lendahl, M., DEMENEIX, B. A., & Laudet, V. (2011) · BMC Developmental Biology · doi:10.1186/1471-213x-11-4 · Cited by 83 · see citing works
Self-citationThe evolution of plasma cholesterol: Direct utility or a “spandrel” of hepatic lipid metabolism?
Babin, P. J., & Gibbons, G. F. (2008) · Progress in Lipid Research · doi:10.1016/j.plipres.2008.11.002 · Cited by 78 · see citing works
The amphioxus genome enlightens the evolution of the thyroid hormone signaling pathway
Paris, M., Brunet, F., Markov, G. V., Schubert, M., & Laudet, V. (2008) · Development Genes and Evolution · doi:10.1007/s00427-008-0255-7 · Cited by 70 · see citing works
Self-citationNeuropeptide diversity and the regulation of social behavior in New World primates
French, J. A., Taylor, J. H., Mustoe, A. C., & Cavanaugh, J. (2016) · Frontiers in Neuroendocrinology · doi:10.1016/j.yfrne.2016.03.004 · Cited by 66 · see citing works
Agrochemicals with estrogenic endocrine disrupting properties: Lessons Learned?
Vandenberg, L. N., Najmi, A., & Mogus, J. P. (2020) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2020.110860 · Cited by 61 · see citing works
The Loss of Adipokine Genes in the Chicken Genome and Implications for Insulin Metabolism
Đaković, N., Térézol, M., Frédérique Pitel, A., Maillard, V., Elis, S., Leroux, S., Lagarrigue, S., Gondret, F., Klopp, C., Baéza, É., et al. (2014) · Molecular Biology and Evolution · doi:10.1093/molbev/msu208 · Cited by 58 · see citing works
Evolution of Cytochrome P450 Genes from the Viewpoint of Genome Informatics
Gotoh, O. (2012) · Biological and Pharmaceutical Bulletin · doi:10.1248/bpb.35.812 · Cited by 56 · see citing works
Frédérique Pitel, A., Faraut, T., Bruneau, G., & Monget, P. (2009) · General and Comparative Endocrinology · doi:10.1016/j.ygcen.2009.10.006 · Cited by 56 · see citing works
Evolution of Retinoic Acid Receptors and Retinoic Acid Signaling
Gutierrez-Mazariegos, J., Schubert, M., & Laudet, V. (2014) · Sub-cellular biochemistry/Subcellular biochemistry · doi:10.1007/978-94-017-9050-5_4 · Cited by 55 · see citing works
Self-citationAlbalat, R., Brunet, F., Laudet, V., & Schubert, M. (2011) · Genome Biology and Evolution · doi:10.1093/gbe/evr084 · Cited by 50 · see citing works
Self-citationZheng, C., Ballard, E. B., & Wu, J. (2021) · Development · doi:10.1242/dev.195792 · Cited by 49 · see citing works
Active Metabolism of Thyroid Hormone During Metamorphosis of Amphioxus
Paris, M., Hillenweck, A., Bertrand, S., Delous, G., Escrivá, H., Zalko, D., Cravedi, J., & Laudet, V. (2010) · Integrative and Comparative Biology · doi:10.1093/icb/icq052 · Cited by 49 · see citing works
Self-citationKubick, N., Klimovich, P., Flournoy, P. C. H., Bieńkowska, I., Łazarczyk, M., Sacharczuk, M., Bhaumik, S., Mickael, M., & Basu, R. (2021) · Genes · doi:10.3390/genes12060813 · Cited by 38 · see citing works
Nuclear Receptors: Small Molecule Sensors that Coordinate Growth, Metabolism and Reproduction
Pardee, K., Necakov, A., & Krause, H. M. (2011) · Sub-cellular biochemistry/Subcellular biochemistry · doi:10.1007/978-90-481-9069-0_6 · Cited by 37 · see citing works
Molecular evolution of the oxytocin–oxytocin receptor system in eutherians
Yamashita, K., & Kitano, T. (2013) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2013.02.017 · Cited by 33 · see citing works
Gonadotropin-releasing hormone by any other name would smell as sweet
Tsai, P. (2017) · General and Comparative Endocrinology · doi:10.1016/j.ygcen.2017.09.010 · Cited by 26 · see citing works
Mickael, M., Rajput, A. B., Steyn, J. S., Wiemerslage, L., & Bürglin, T. R. (2016) · Comparative Biochemistry and Physiology Part D Genomics and Proteomics · doi:10.1016/j.cbd.2016.08.005 · Cited by 24 · see citing works
Nuclear receptor research in zebrafish
Schaaf, M. J. M. (2017) · Journal of Molecular Endocrinology · doi:10.1530/jme-17-0031 · Cited by 23 · see citing works
Nuclear receptors in nematode development: Natural experiments made by a phylum
Kostrouchová, M., & Kostrouch, Z. (2014) · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms · doi:10.1016/j.bbagrm.2014.06.016 · Cited by 21 · see citing works
Zhu, L., Wang, G., Shi, W., Ma, X., Yang, X., Yang, H., Guo, Y., & Yang, L. (2019) · Journal of Colloid and Interface Science · doi:10.1016/j.jcis.2019.01.090 · Cited by 21 · see citing works
Transcriptome Analysis of Diurnal Gene Expression in Chinese Cabbage
Kim, J. A., Shim, D., Kumari, S., Jung, H.-E., Jung, K., Jeong, H., Kim, W., Lee, S. I., & Jeong, M. (2019) · Genes · doi:10.3390/genes10020130 · Cited by 18 · see citing works
Evolution of thyrotropin-releasing factor extracellular communication units
Lazcano, I., Rodríguez-Rodríguez, A., Uribe, R. M., Orozco, A., Joseph‐Bravo, P., & Charli, J. (2020) · General and Comparative Endocrinology · doi:10.1016/j.ygcen.2020.113642 · Cited by 14 · see citing works
Bayne, B. L. (2017) · Developments in aquaculture and fisheries science · doi:10.1016/b978-0-12-803472-9.00009-1 · Cited by 13 · see citing works
TheC. elegansVAPB homolog VPR-1 is a permissive signal for gonad development
Cottee, P. A., Cole, T., Schultz, J., Hoang, H. D., Vibbert, J., Han, S. M., & Miller, M. A. (2017) · Development · doi:10.1242/dev.152207 · Cited by 12 · see citing works
In silico analysis of crustacean hyperglycemic hormone family G protein-coupled receptor candidates
Kozma, M. T., Pérez‐Moreno, J. L., Gandhi, N. S., Jeppesen, L. H., Durica, D. S., Ventura, T., & Mykles, D. L. (2024) · Frontiers in Endocrinology · doi:10.3389/fendo.2023.1322800 · Cited by 11 · see citing works
Gutierrez-Mazariegos, J., Nadendla, E. K., Studer, R. A., Álvarez, S., de Lera, Á. R., Kuraku, S., Bourguet, W., Schubert, M., & Laudet, V. (2016) · Royal Society Open Science · doi:10.1098/rsos.150484 · Cited by 11 · see citing works
Self-citationNuclear Receptor Genes: Evolution
Sáez, P. J., Lange, S., Pérez‐Acle, T., & Owen, G. I. (2010) · Encyclopedia of Life Sciences · doi:10.1002/9780470015902.a0006145.pub3 · Cited by 11 · see citing works
Interspecies Chimeric Barriers for Generating Exogenic Organs and Cells for Transplantation
Strell, P., Shetty, A. V., Steer, C. J., & Low, W. C. (2022) · Cell Transplantation · doi:10.1177/09636897221110525 · Cited by 8 · see citing works
Independent elaboration of steroid hormone signaling pathways in MetazoansPreprint
Markov, G. V., Tavares, R., Dauphin‐Villemant, C., DEMENEIX, B. A., Baker, M. E., & Laudet, V. (2009) · Nature Precedings · doi:10.1038/npre.2009.3374.1 · Cited by 8 · see citing works
Self-citationThe adaptive value of hormones: Endocrine systems as outcomes and initiators of evolution
Lema, S. C. (2020) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2020.110983 · Cited by 7 · see citing works
What does Evolution Teach us about Nuclear Receptors?
Markov, G. V., Bonneton, F., & Laudet, V. (2010) · Springer eBooks · doi:10.1007/978-90-481-3303-1_2 · Cited by 7 · see citing works
Self-citationLismont, E., Verbakel, L., Vogel, E., Corbisier, J., Degroot, G.-N., Verdonck, R., Verlinden, H., Marchal, E., Springael, J., & Broeck, J. V. (2020) · Insect Biochemistry and Molecular Biology · doi:10.1016/j.ibmb.2020.103392 · Cited by 6 · see citing works
Dwyer, D. S. (2021) · Life · doi:10.3390/life11121335 · Cited by 3 · see citing works
Somekh, J. (2020) · Scientific Reports · doi:10.1038/s41598-020-73214-w · Cited by 2 · see citing works
Endocannabinoid System in a Planarian Model
Mustonen, K. L. (2010) · doi:10.12794/metadc33188 · Cited by 2 · see citing works
The Power of an Evolutionary Perspective in Studies of Endocrinology
He, J., David, M., & Zhang, Y. (2011) · InTech eBooks · doi:10.5772/17974 · Cited by 1 · see citing works
Provost, T., & McCarthy, T. M. (2022) · Northeastern Naturalist · doi:10.1656/045.029.0309
Evolution of Steroid Signaling in Metazoans
Markov, G. V. (2011) · theses.fr (ABES) · doi:10.70675/816a1939zc7e3z4c7azb90fzf9d9a08011af
Self-citationEvolution of the retinoic acid receptor
Gutierrez-Mazariegos, J. (2014) · doi:10.70675/361e9701z45c1z4914z9bc7z9d25e1c92665
- Authors
- Markov, G. V., Paris, M., Bertrand, S., & Laudet, V.
- Affiliations
- Lyon 1 Université (FR)
- Universitat de Barcelona (ES)
- Corresponding author
- Laudet, Vincent
- Venue
- Molecular and Cellular Endocrinology
- Publisher
- Elsevier BV
- Published
- 2008-10
- Volume
- 293
- Issue
- 1-2
- Pages
- 5-16
- ISSN
- 0303-7207 (ISSN-L)
- OpenAlex
- W2015979867
- Cited by
- 48
- References
- 108
- Citations by year
- 2024: 1 · 2022: 2 · 2021: 4 · 2020: 5 · 2019: 2 · 2018: 1 · 2017: 4 · 2016: 3 · 2014: 4 · 2013: 1 · 2012: 1
- FWCI
- 0.51
- Type
- journal article
- Language
- en
- Open access
- green
- hal.science
- Licence
- Locations
- Molecular and Cellular Endocrinology (publishedVersion)
- PubMed (publishedVersion)
- HAL (submittedVersion, other-oa)
- Trinity's Access to Research Output (TARA) (Trinity College Dublin) (submittedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Receptor Mechanisms and Signaling
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuropeptides and Animal Physiology
- Keywords
- comparative endocrinology, comparative genomics, neuroendocrine system, receptor evolution, non-model organisms, model organisms, Drosophila, arthropods
- MeSH terms
- Animals, Drosophila, Endocrine System, Humans, Ligands, Phylogeny, Recombination, Genetic, Caenorhabditis elegans, Gene Deletion, Receptors, Cytoplasmic and Nuclear, Evolution, Molecular, Gene Duplication, Genomics
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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