Cited by 13

The DOI matches its Crossref record.

Whole genome sequencing analysis and Box-Behnken design for the optimization of the decolourization of mixture textile dyes by halotolerant microbial consortium

Alghamdi, Majed Abdulrhman, Ayed, Lamia, Aljarad, Mohamed Rajeh, Altayeb, Hisham N., abbes, Samir, Chaieb, Kamel·2023·Microbiological Research

Abstract

The use of dyes in textile industries has resulted in substantially contaminated soil, water and ecosystem including fauna and flora. So, the application of eco-friendly approach for dyes removal is in great demand. The goal of this research was to develop and test a bacterial consortium for biodegrading dyes in artificial textile effluent (ATE) derived from mixture of Indigo carmine (40 mg/l); Malachite green (20 mg/l); Cotton bleu (40 mg/l); Bromocresol green (20 mg/l) and CI Reactive Red 66 (40 mg/l) dissolved in artificial seawater. The Box-Behnken design (BBD) which combine six variables with three levels each was used to determine the potential removal of dyes in ATE, by the selected microbial consortium (M31 and M69b). The experimental process indicated that decolourization of ATE reached 77.36 % under these conditions values: salinity (30 g/l), pH (9), peptone (5 g/l), inoculum size (1.5 10 8 CFU/ml), agitation (150 rpm) and contact time (72 h). The decolourization was confirmed by FTIR spectrum analysis of ATE before and after bacterial treatment. Bacterial strains used in this study were identified as Halomonas pacifica M31 and Shewanella algae M69b using 16 rDNA sequences. Moreover, the total genome analysis of M31 and M69b validated the implication of bacterial genes in mixture dyes removal. Therefore, the effect of the selected bacterial consortium on ATE removal was confirmed and it may be used in industrial wastewater treatment to issuing environmental safety.

Overview

Integrity signals

Registry

Crossref · 10.1016/j.micres.2023.127481

Cites

Statistics

Recomputing p-values needs the paper’s full text.

Verification

Claims the paper makes

This paper’s full text isn’t openly available, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Citations

Cites

No references could be resolved yet.

Research works printed but not linked: 55

  1. Abd El-malek, 2020, Polyhydroxyalkanoates (PHA) from Halomonas pacifica ASL10 and Halomonas salifodiane ASL11 isolated from Mariout salt lakes, Int. J. Biol. Macromol., 161, 1318, 10.1016/j.ijbiomac.2020.07.258 · DOI
  2. Abdelkafi, 2006, Isolation and characterization of Halomonas sp. strain IMPC, ap-coumaric acid-metabolizing bacterium that decarboxylates other cinnamic acids under hypersaline conditions, FEMS Microbiol. Lett., 255, 108, 10.1111/j.1574-6968.2005.00061.x · DOI
  3. Adegoke, 2015, Dye sequestration using agricultural wastes as adsorbents, Water Resour. Ind., 12, 8, 10.1016/j.wri.2015.09.002 · DOI · Paper page
  4. Altayb, 2021, Mathematical modeling and optimization by the application of full factorial design and response surface methodology approach for decolourization of dyes by a newly isolated Photobacterium ganghwense, J. Water Process Eng., 44, 10.1016/j.jwpe.2021.102429 · DOI
  5. Al-Tohamy, 2022, A critical review on the treatment of dye-containing wastewater: ecotoxicological and health concerns of textile dyes and possible remediation approaches for environmental safety, Ecotoxicol. Environ. Saf., 231, 10.1016/j.ecoenv.2021.113160 · DOI · Paper page
  6. Alva, 2003, Phenol and catechol biodegradation by the haloalkaliphile Halomonas campisalis: influence of pH and salinity, Environ. Sci. Technol., 37, 4397, 10.1021/es0341844 · DOI
  7. Ameenudeen, 2021, Statistical optimization for the efficacious degradation of reactive azo dyes using Acinetobacter baumannii JC359, J. Environ. Manag., 279, 10.1016/j.jenvman.2020.111512 · DOI
  8. Asad, 2007, Decolorization of textile azo dyes by newly isolated halophilic and halotolerant bacteria, Bioresour. Technol., 98, 2082, 10.1016/j.biortech.2006.08.020 · DOI
  9. Ayed, 2021, Decolorization and phytotoxicity reduction of reactive blue 40 dye in real textile wastewater by active consortium: Anaerobic/aerobic algal-bacterial-probiotic bioreactor, J. Microbiol. Methods, 181, 10.1016/j.mimet.2020.106129 · DOI
  10. Ayed, 2022, Modeling and optimization of biodegradation of methylene blue by Staphylococcus aureus through a statistical optimization process: a sustainable approach for waste management, Water Sci. Technol., 86, 380, 10.2166/wst.2022.211 · DOI
  11. Babu, 2013, Multiple approaches towards decolorization and reuse of a textile dye (VB-B) by a marine bacterium Shewanella decolorationis, Water Air Soil Pollut., 224, 1, 10.1007/s11270-013-1500-x · DOI
  12. Balamurugan, 2011, Anaerobic degradation of textile dye bath effluent using Halomonas sp, Bioresour. Technol., 102, 6365, 10.1016/j.biortech.2011.03.017 · DOI
  13. Berradi, 2019, Textile finishing dyes and their impact on aquatic environs, Heliyon, 5, 10.1016/j.heliyon.2019.e02711 · DOI · Paper page
  14. Box, 1960, Some new three level designs for the study of quantitative variables, Technometrics, 2, 455, 10.1080/00401706.1960.10489912 · DOI
  15. Chaieb, 2022, Molecular identification of indigenous halotolerant bacteria isolated from the red sea coast applied for biodegradation of synthetic dyes and assessment of degraded metabolite toxicity, Process Saf. Environ. Prot., 160, 817, 10.1016/j.psep.2022.02.051 · DOI
  16. Chaieb, 2023, Enhanced textile dye removal from wastewater using natural biosorbent and Shewanella algae B29: application of Box Behnken design and genomic approach, Bioresour. Technol., 10.1016/j.biortech.2023.128755 · DOI
  17. Chang, 2022, Biologically recovered polyhydroxyalkanoates (PHA) as novel biofilm carrier for Acid Orange 7 decolourization: Statistical optimization of physicochemical and biological factors, J. Water Process Eng., 49, 10.1016/j.jwpe.2022.103175 · DOI
  18. Cheffi, 2020, Isolation and characterization of a newly naphthalene-degrading Halomonas pacifica, strain Cnaph3: biodegradation and biosurfactant production studies, 3 Biotech, 10, 1, 10.1007/s13205-020-2085-x · DOI
  19. Copley, 2011, The whole genome sequence of Sphingobium chlorophenolicum L-1: insights into the evolution of the pentachlorophenol degradation pathway, Genome Biol. Evol., 4, 184, 10.1093/gbe/evr137 · DOI
  20. Cortés-Herrera, 2018, Liquid chromatography analysis of common nutritional components, in feed and food, Foods, 8, 1, 10.3390/foods8010001 · DOI
  21. Corti Monzón, 2018, New findings on aromatic compounds’ degradation and their metabolic pathways, the biosurfactant production and motility of the halophilic bacterium Halomonas sp. KHS3, Curr. Microbiol., 75, 1108, 10.1007/s00284-018-1497-x · DOI
  22. Doley, 2020, Study on awareness of consumers about dye related problems, Int. J. Curr. Microbiol. Appl. Sci., 9, 1171, 10.20546/ijcmas.2020.912.142 · DOI
  23. Eslami, 2016, Isolation, cloning and characterization of an azoreductase from the halophilic bacterium Halomonas elongata, Int. J. Biol. Macromol., 85, 111, 10.1016/j.ijbiomac.2015.12.065 · DOI
  24. Esposito, 2023, Enhanced production of biobased, biodegradable, Poly(3-hydroxybutyrate) using an unexplored marine bacterium Pseudohalocynthiibacter aestuariivivens, isolated from highly polluted coastal environment, Bioresour. Technol., 368, 10.1016/j.biortech.2022.128287 · DOI
  25. García, 2004, Halomonas organivorans sp. nov., a moderate halophile able to degrade aromatic compounds, Int. J. Syst. Evolut. Microbiol., 54, 1723, 10.1099/ijs.0.63114-0 · DOI
  26. Gil-Chávez, 2020, Optimization of the spray-drying process for developing aquasolv lignin particles using response surface methodology, Adv. Powder Technol., 31, 2348, 10.1016/j.apt.2020.03.027 · DOI
  27. Gita, 2017, Impact of textile dyes waste on aquatic environments and its treatment, Environ. Ecol., 35, 2349
  28. Govarthanan, 2020, Rapid biodegradation of chlorpyrifos by plant growth-promoting psychrophilic Shewanella sp. BT05: an eco-friendly approach to clean up pesticide-contaminated environment, Chemosphere, 247, 10.1016/j.chemosphere.2020.125948 · DOI
  29. Guy, 2022, Process parameters optimization, characterization, and application of KOH-activated Norway spruce bark graphitic biochars for efficient azo dye adsorption, Molecules, 27, 456, 10.3390/molecules27020456 · DOI
  30. Haernvall, 2017, A new arylesterase from Pseudomonas pseudoalcaligenes can hydrolyze ionic phthalic polyesters, J. Biotechnol., 257, 70, 10.1016/j.jbiotec.2017.01.012 · DOI
  31. Haq, 2018, Biodegradation of Azure-B dye by Serratia liquefaciens and its validation by phytotoxicity, genotoxicity and cytotoxicity studies, Chemosphere, 196, 58, 10.1016/j.chemosphere.2017.12.153 · DOI
  32. Hinteregger, 1997, Halomonassp., a moderately halophilic strain, for biotreatment of saline phenolic waste-water, Biotechnol. Lett., 19, 1099, 10.1023/A:1018488410102 · DOI
  33. Ismail, 2019, Pollution, toxicity and carcinogenicity of organic dyes and their catalytic bio-remediation, Curr. Pharm. Des., 25, 3645, 10.2174/1381612825666191021142026 · DOI
  34. Kim, 2023, Polyhydroxybutyrate production from crude glycerol using a highly robust bacterial strain Halomonas sp. YLGW01, Int. J. Biol. Macromol., 10.1016/j.ijbiomac.2023.123997 · DOI
  35. Lemaire, 2019, Shewanella decolorationis LDS1 chromate resistance, Appl. Environ. Microbiol., 85, e00777, 10.1128/AEM.00777-19 · DOI
  36. Lizárraga, 2022, Complete genome sequence of Shewanella algae strain 2NE11, a decolorizing bacterium isolated from industrial effluent in Peru, Biotechnol. Rep., 33
  37. Manya, 2021, Complete genome sequence of Halomonas sp. Strain SH5A2, a dye-degrading halotolerant bacterium isolated from the salinas and aguada blanca national reserve in Peru, Microbiol. Resour. Announc., 10, e01083, 10.1128/MRA.01083-20 · DOI
  38. Miyauchi, 1998, Cloning and sequencing of a 2, 5-dichlorohydroquinone reductive dehalogenase gene whose product is involved in degradation of γ-hexachlorocyclohexane by Sphingomonas paucimobilis, J. Bacteriol., 180, 1354, 10.1128/JB.180.6.1354-1359.1998 · DOI
  39. Mohammed, 2020, Optimization of methylene blue degradation by Aspergillus terreus YESM 3 using response surface methodology, Water Sci. Technol., 82, 2007, 10.2166/wst.2020.476 · DOI
  40. Mohan, 2002, Treatment of simulated Reactive Yellow 22 (Azo) dye effluents using Spirogyra species, Waste Manag., 22, 575, 10.1016/S0956-053X(02)00030-2 · DOI
  41. Mohanty, 2020, Response surface methodology mediated optimization of Indanthrene Blue RS by a novel isolated bacterial strain Bacillus flexus TS8, Water Environ. Res., 92, 569, 10.1002/wer.1246 · DOI
  42. Moharrery, 2019, Degradation of toluidine red, an oil soluble azo dye by Halomonas strain IP8 at alkaline condition, Chem. Eng. Commun., 206, 61, 10.1080/00986445.2018.1472587 · DOI
  43. Ogugbue, 2011, Bioremediation and detoxification of synthetic wastewater containing triarylmethane dyes by Aeromonas hydrophila isolated from industrial effluent, Biotechnol. Res. Int., 2011
  44. Qiu, 2022, The joint toxicity of organic three-dimensional layered double hydroxide and methyl orange to green algae Chlorella vulgaris, Bull. Environ. Contam. Toxicol., 108, 1098, 10.1007/s00128-022-03509-3 · DOI
  45. Rathour, 2021, Integrated approach of whole-genome analysis, toxicological evaluation and life cycle assessment for pyrene biodegradation by a psychrophilic strain, Shewanella sp. ISTPL2, Environ. Pollut., 269, 10.1016/j.envpol.2020.116176 · DOI
  46. Santos-Beneit, 2023, Screening enzymes that can depolymerize commercial biodegradable polymers: heterologous expression of Fusarium solani Cutinase in Escherichia coli, Microorganisms, 11, 328, 10.3390/microorganisms11020328 · DOI
  47. Sharma, 2023, Toxicity of malachite green on plants and its phytoremediation: a review, Reg. Stud. Mar. Sci.
  48. Shukla, 2021, Removal of disperse orange and disperse blue dyes present in textile mill effluent using zeolite synthesized from cenospheres, Water Sci. Technol., 84, 445, 10.2166/wst.2021.216 · DOI
  49. Silva, 2021, Decolorization of the benzidine-based azo dye Congo red by the new strain Shewanella xiamenensis G5-03, Braz. J. Biol., 82
  50. Suastes-Rivas, 2020, Simultaneous optimization of biomass and metabolite production by a microalgae-yeast co-culture under inorganic micronutrients, BioEnergy Res., 13, 974, 10.1007/s12155-020-10116-9 · DOI
  51. Sudarshan, 2023, Impact of textile dyes on human health and bioremediation of textile industry effluent using microorganisms: current status and future prospects, J. Appl. Microbiol. 134, lxac0, 64
  52. Tan, 2000, Removal of dyes and industrial dye wastes by magnesium chloride, Water Res., 34, 597, 10.1016/S0043-1354(99)00151-7 · DOI
  53. Tsai, 1992, ATP-dependent cadmium transport by the cadA cadmium resistance determinant in everted membrane vesicles of Bacillus subtilis, J. Bacteriol., 174, 116, 10.1128/jb.174.1.116-121.1992 · DOI
  54. Ye, 2016, Isolation and characterization of atrazine‐degrading strain Shewanella sp. YJY4 from cornfield soil, Lett. Appl. Microbiol., 63, 45, 10.1111/lam.12584 · DOI
  55. Yi, 2022, Genomic analysis of two representative strains of Shewanella putrefaciens isolated from bigeye tuna: biofilm and spoilage-associated behavior, Foods, 11, 1261, 10.3390/foods11091261 · DOI

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review