Sequence-Directed Action of RSC Remodeler and General Regulatory Factors Modulates +1 Nucleosome Position to Facilitate Transcription

Kubik, Slawomir, O’Duibhir, Eoghan, de Jonge, Wim J., Mattarocci, Stefano, Albert, Benjamin, Falcone, Jean-Luc, Bruzzone, Maria Jessica, Holstege, Frank C.P. +1 more·2018·Molecular Cell
DOI 10.1016/j.molcel.2018.05.030

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  2. Extended ncRNAs Interfere with Promoter Nucleosome Dynamics
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  3. Dynamic 1D Search and Processive Nucleosome Translocations by RSC and ISW2 Chromatin Remodelers
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  4. Effect of the Nucleosome-Depleted Region in the Transcribed Regions of Saccharomyces cerevisiae Genes on Exogenous Gene Expression
    S S Wang, Hong Li, Xiaolong Li · 2024 · Applied Sciences
  5. RSC and GRFs confer promoter directionality by limiting divergent noncoding transcription
    Andrew C.K. Wu, Claudia Vivori, Harshil Patel, Theodora C. Sideri, Fabien Moretto, Folkert Jacobus van Werven · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  6. Structure of SWI/SNF chromatin remodeller RSC bound to a nucleosome and implications for chromatin remodelling
    Felix Wagner · 2020
  7. Transcription regulation dynamics
    Willem Jozef de Jonge · 2020
  8. Faculty Opinions recommendation of RSC-Associated Subnucleosomes Define MNase-Sensitive Promoters in Yeast.
    Tom Owen‐Hughes · 2020 · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
  9. The TRIPLE PHD FINGERS proteins are required for SWI/SNF complex-mediated +1 nucleosome positioning and 5’ transcript length determination in Arabidopsis
    Borja Diego‐Martin, Jaime Pérez-Alemany, Joan Candela-Ferre, Antonio Corbalán-Acedo, Juan Pereyra, David Alabadı́, Yasaman Jami‐Alahmadi, James Wohlschlegel, Javier Gallego‐Bartolomé · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  10. The role of histone acetyltransferases Gcn5 and Esa1 in recruiting the RSC complex and maintaining nucleosome-depleted regions genome-wide in Saccharomyces cerevisiae
    Emily Biernat, Mansi Verma, Matthew Werick, Uzair Khan, Sama Joseph, Chhabi K. Govind · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  11. The association of the RSC remodeler complex with chromatin depends on prefoldin-like Bud27 and determines nucleosome positioning and polyadenylation sites usage in Saccharomyces cerevisiae
    Abel Cuevas-Bermúdez, Verónica Martínez-Fernández, Ana Isabel Garrido-Godino, Antonio Jordán‐Pla, Xenia Peñate, Manuel Martín‐Expósito, Gabriel Gutiérrez, Chhabi K. Govind, Sebastián Chávez, Vicent Pelechano et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  12. Simultaneous Mapping of DNA Binding and Nucleosome Positioning with SpLiT-ChEC
    Orion GB Banks, Michael J. Harms, Jeffrey N. McKnight, Laura E. McKnight · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  13. Influencia de secuencias de ADN en procesos activos que determinan el posicionamiento nucleosomal.
    José Leonardo Gutiérrez Contreras · 2023
  14. Decoding Nucleosome-Depleted Regions: Insights from Epigenetic Marks, Nucleosome Size, and Thermodynamic Modelling
    Kévin Tartour, Jérémy Barbier, Kharerin Hungyo, Fabien Sassolas, Cédric Vaillant, Kiran Padmanabhan, Benjamin Audit · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  15. eLife Assessment: Dynamic 1D Search and Processive Nucleosome Translocations by RSC and ISW2 Chromatin Remodelers
    Volker Dötsch · 2023 · eLife
  16. Reviewer #1 (Public Review): Dynamic 1D Search and Processive Nucleosome Translocations by RSC and ISW2 Chromatin Remodelers
    2023 · eLife
  17. Reviewer #2 (Public Review): Dynamic 1D Search and Processive Nucleosome Translocations by RSC and ISW2 Chromatin Remodelers
    2023 · eLife
  18. Dynamic 1D Search and Processive Nucleosome Translocations by RSC and ISW2 Chromatin Remodelers
    Jee Min Kim, Claudia C. Carcamo, Sina Jazani, Zepei Xie, Xinyu Ashlee Feng, Matthew F. Poyton, Katie L. Holland, Jonathan B. Grimm, Luke D. Lavis, Taekjip Ha et al. · 2023 · eLife
  19. Review #2 (Public Review): Dynamic 1D Search and Processive Nucleosome Translocations by RSC and ISW2 Chromatin Remodelers
    2024 · eLife
  20. Dynamic 1D search and processive nucleosome translocations by RSC and ISW2 chromatin remodelers
    Jee Min Kim, Claudia C. Carcamo, Sina Jazani, Zepei Xie, Xinyu Ashlee Feng, Maryam Yamadi, Matthew F. Poyton, Katie L. Holland, Jonathan B. Grimm, Luke D. Lavis et al. · 2024 · eLife
  21. Nucleosomes in context: Positioning, occupancy, and spacing
    Randall H. Morse · 2024 · Elsevier eBooks
  22. Chromatin and transcription
    Randall H. Morse · 2024 · Elsevier eBooks
  23. Regulación del posicionamiento nucleosómico mediante la secuencia del DNA y los remodeladores de cromatina en Schizosaccharomyces pombe
    Isabel Vaquero Eusebio · 2024
  24. Rsc1 DNA-binding bromodomain drives RSC activity at A-rich promoters
    Camille Sayou, Oriane Viravaux, Jordan Lyonnet, Jérémy Lucas, Raphael Dupeyron, Emmanuel Thévenon, Julie Marais, Annie Adrait, Yohann Couté, François Parcy et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
  25. Gene promoters are genomically encoded to facilitate histone exchange/incorporation
    Blaine Bartholomew · 2025 · PLoS Biology
  26. Additional file 6 of Not1 and Not4 inversely determine mRNA solubility that sets the dynamics of co-translational events
    George Edward Allen, Benjamin Weiss, Olesya O. Panasenko, Susanne Huch, Zoltán Villányi, Benjamin Albert, Daniel Dilg, Marina Zagatti, Paul Schaughency, Susan E. Liao et al. · 2023 · Figshare
  27. Additional file 1 of Not1 and Not4 inversely determine mRNA solubility that sets the dynamics of co-translational events
    George Edward Allen, Benjamin Weiss, Olesya O. Panasenko, Susanne Huch, Zoltán Villányi, Benjamin Albert, Daniel Dilg, Marina Zagatti, Paul Schaughency, Susan E. Liao et al. · 2023 · Figshare
  28. Additional file 1 of General regulatory factors exert differential effects on nucleosome sliding activity of the ISW1a complex
    Andrea Oyarzún-Cisterna, Cristián Gidi, Fernanda Raiqueo, Roberto Amigo, Rivas, Camila, Marcela Torrejón, José Leonardo Gutiérrez · 2024 · Figshare
  29. Additional file 7 of Not1 and Not4 inversely determine mRNA solubility that sets the dynamics of co-translational events
    George Edward Allen, Benjamin Weiss, Olesya O. Panasenko, Susanne Huch, Zoltán Villányi, Benjamin Albert, Daniel Dilg, Marina Zagatti, Paul Schaughency, Susan E. Liao et al. · 2023 · Figshare
  30. Role of general regulatory factors in the control of gene expression and transcription fidelity
    Drice Challal · 2019
  31. Structural and functional reorganization of the genome in quiescent cells
    Manuela Baquero Perez · 2023 · theses.fr (ABES)
  32. Genome-wide analysis reveals the importance of histone acetyltransferase Esa1 in transcriptional regulation during nitrogen starvation
    Uzair Khan, Krystal Cvetkovski, Matthew Werick, Cole A Tracy, Sara Fatima, Dimitra Dialynaki, Daniel J. Klionsky, Chhabi K. Govind · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
  33. Discovery and engineering of a dynamic PCK promoter for methanol-independent high-level brazzein production in Ogataea parapolymorpha
    Xiaoyi Zou, Zihao Qi, Yanshan Ke, Weizhu Zeng, Liang Zhang, Jingwen Zhou · 2026 · Chemical Engineering Journal