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Gene profiling involved in immature CD4+ T lymphocyte responsible for systemic lupus erythematosus
Abstract
We attempted to characterize the genes expression of CD4+ T lymphocytes for the pathogenesis of systemic lupus erythematosus (SLE). Genomewide gene expression profiles of CD4+ T cells, which were isolated from the disease severe activity (T4-1s) and nonactivity (T4-2s) with an SLE patient by using long serial analysis of gene expression (LongSAGE). We picked out 289 genes matching to Unigene cluster with different expression more than four copies between T4-1s and T4-2s libraries and analyzed their roles from the collectedly published articles of PubMed by genes functional clustering. The genes functions were related to a diverse cellular process including: (1) most of these genes were associated with CD4+ T cells functions, particularly related to cellular developments; (2) Ras pathway genes as RANBP10, GMIP, RASGRP2 and ARL5 might be responsible for the abnormal development of CD4+ T cells of SLE; (3) HIG2, TCF7, KHSRP, WWP1, SMAD3, TLK2, AES, CCNI and PIM2 belong to Wnt/beta-catenin way, they could play roles in modulating proliferation and differentiation of T lymphocytes; (4) uncertain viral infections may initiate autoimmunity because high levels expression genes were detected in T4-1s such as TRIM22, IER2, ABCE1, DUT, G1P2, G1P3, HNRPUL1, EVER2, IFNAR1, TNFSF14, TMP21 and PVRL2; and (5) apoptosis relating genes as EIF3S8, SH3BGRL3, GPX4, TOSO, PFDN5, BIN1, XIAPAF1, TEGT and CUGBP2 may contribute to over uploading of selfantigens in SLE cells. Abnormalities findings of multiple genes expression involving with a variety of CD4+ T cells process might be meaningful to understanding the pathogenesis of SLE, and immature CD4+ T cells may be responsible for SLE.
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“Genome-wide expression profiles revealed several upregulated genes, including GANAB at high levels in the active state of SLE.”
From GANAB and N-Glycans Substrates Are Relevant in Human Physiology, Polycystic Pathology and Multiple Sclerosis: A Review (2022) · cites this paper as [446]
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“In 2006, Deng and coworkers attempted to characterize gene expression of CD4+ T lymphocytes in patients suffering from this disease [446].”
BackgroundGANAB as a Novel Biomarker in Multiple Sclerosis: Correlation with Neuroinflammation and IFI35
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Metadata
- Authors
- Deng, Y. J., Huang, Z. X., Zhou, C. J., Wang, J. W., You, Y., Song, Z. Q., Xiang, M. M., Zhong, B. Y., & Hao, F.
- Affiliations
- Army Medical University (CN)
- Southern Medical University (CN)
- Corresponding author
- Hao, F.
- Venue
- Molecular Immunology
- Publisher
- Elsevier BV
- Published
- 2006-03
- Volume
- 43
- Issue
- 9
- Pages
- 1497-1507
- ISSN
- 0161-5890 (ISSN-L)
- OpenAlex
- W1965949659
- Cited by
- 51
- References
- 3
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 4 · 2023: 7 · 2022: 3 · 2021: 1 · 2020: 2 · 2019: 4 · 2017: 2 · 2016: 2 · 2015: 2 · 2013: 3 · 2012: 4
- FWCI
- 0.81
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Molecular Immunology (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Natural Science Foundation of China
- Topics
- Health Sciences › Medicine › Rheumatology › Systemic Lupus Erythematosus Research
- Life Sciences › Immunology and Microbiology › Immunology › T-cell and B-cell Immunology
- Health Sciences › Medicine › Rheumatology › Systemic Sclerosis and Related Diseases
- Keywords
- systemic lupus erythematosus, CD4+ T cells, gene expression profiling, T cell development, Ras signaling, Wnt/β-catenin signaling, viral infection, autoimmunity, apoptosis, autoantigen presentation, disease activity
- MeSH terms
- Adult, Base Sequence, Cell Differentiation, DNA, Female, Multigene Family, Humans, Immunosuppressive Agents, Lupus Erythematosus, Systemic, CD4-Positive T-Lymphocytes, Gene Library, Gene Expression Profiling
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