Roles of specialized DNA polymerases in mutagenesis by 8-hydroxyguanine in human cells
Open accessAbstract
The formation of 8-hydroxyguanine (8-OH-Gua, 7,8-dihydro-8-oxoguanine) in DNA and in the nucleotide pool results in G:C-->T:A and A:T-->C:G substitution mutations, respectively, due to the ability of 8-OH-Gua to pair with both C and A. In this study, shuttle plasmid DNAs containing 8-OH-Gua paired with C and A in the supF gene were transfected into human 293T cells, in which specialized DNA polymerases were knocked-down. The DNAs replicated in the cells were recovered and then introduced into an indicator strain of Escherichia coli. Mutation analysis indicated that the knock-downs of DNA polymerases eta and zeta by siRNAs enhanced the G:C-->T:A mutations caused by 8-OH-Gua:C. The 8-OH-Gua:C-induced mutation frequency was not further increased by double knock-downs of DNA polymerases eta and zeta, suggesting that the two DNA polymerases work in the same pathway. In addition, the reduction of DNA polymerase eta slightly decreased the A:T-->C:G substitutions caused by 8-OH-Gua:A. These results suggest that DNA polymerases eta and zeta are involved in the bypass of 8-OH-Gua in human cells.
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Pol eta can insert A or C opposite a site with 8-oxoG, which may result in a G to T transversion.
“Pol eta can insert A or C opposite a site with 8-oxoG, which may result in a G to T transversion.”
From Sunlight damage to cellular DNA: focus on oxidatively generated lesions (2017) · cites this paper as [109]
Pol eta can perform bypass, with moderate efficiency, of 8-oxoG, which has a potentially important role in the suppression of mutations due to this oxidatively generated DNA lesion in human cells.
“It can also perform the bypass, with moderate efficiency, of 8-oxoG, which has a potentially important role in the suppression of mutations due to this oxidatively generated DNA lesion in human cells [109,271].”
From Sunlight damage to cellular DNA: focus on oxidatively generated lesions (2017) · cites this paper as [109]
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Cites
Instability and decay of the primary structure of DNA
Lindahl, T. (1993) · Nature · doi:10.1038/362709a0 · Cited by 5,679 · see citing works
Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8-oxodG
Shibutani, S., Takeshita, M., & Grollman, A. P. (1991) · Nature · doi:10.1038/349431a0 · Cited by 2,224 · see citing works
8-Hydroxyguanine, an abundant form of oxidative DNA damage, causes G-T and A-C substitutions.
Cheng, K. C., Cahill, D. S., Kasai, H., Nishimura, S., & Loeb, L. A. (1992) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)48474-8 · Cited by 1,844 · see citing works
Kasai, H. (1997) · Mutation Research/Reviews in Mutation Research · doi:10.1016/s1383-5742(97)00035-5 · Cited by 1,140 · see citing works
EUKARYOTIC TRANSLESION SYNTHESIS DNA POLYMERASES: Specificity of Structure and Function
Prakash, S., Johnson, R. E., & Prakash, L. (2005) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.74.082803.133250 · Cited by 999 · see citing works
Wood, M. L., Dizdaroğlu, M., Gajewski, E., & Essigmann, J. M. (1990) · Biochemistry · doi:10.1021/bi00482a011 · Cited by 684 · see citing works
Moriya, M. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.3.1122 · Cited by 418 · see citing works
Translesion synthesis: Y-family polymerases and the polymerase switch
LEHMANN, A., NIIMI, A., OGI, T., BROWN, S., SABBIONEDA, S., WING, J., KANNOUCHE, P., & GREEN, C. (2007) · DNA Repair · doi:10.1016/j.dnarep.2007.02.003 · Cited by 389 · see citing works
Efficient and accurate replication in the presence of 7,8-dihydro-8-oxoguanine by DNA polymerase η
Haracska, L., Yu, S.-L., Johnson, R. E., Prakash, L., & Prakash, S. (2000) · Nature Genetics · doi:10.1038/78169 · Cited by 349 · see citing works
Kouchakdjian, M., Bodepudi, V., Shibutani, S., Eisenberg, M., Johnson, F., Grollman, A. P., & Patel, D. J. (1991) · Biochemistry · doi:10.1021/bi00219a034 · Cited by 298 · see citing works
Kamiya, H. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg137 · Cited by 265 · see citing works
Self-citation8-oxo-guanine bypass by human DNA polymerases in the presence of auxiliary proteins
Maga, G., Villani, G., Crespan, E., Wimmer, U., Ferrari, E. S., Bertocci, B., & Hübscher, U. (2007) · Nature · doi:10.1038/nature05843 · Cited by 218 · see citing works
NMR studies of a DNA containing 8-hydroxydeoxyguanosine
Oda, Y., Uesugi, S., Ikehara, M., Nishimura, S., Kawase, Y., Ishikawa, H. T., Inoue, H., & Ohtsuka, E. (1991) · Nucleic Acids Research · doi:10.1093/nar/19.7.1407 · Cited by 217 · see citing works
Kamiya, H., Miura, K., Ishikawa, H., Inoue, H., Nishimura, S., & Ohtsuka, E. (1992) · PubMed · Cited by 193 · see citing works
Self-citationError-prone lesion bypass by human DNA polymerase eta
Zhang, Y. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.23.4717 · Cited by 188 · see citing works
Plum, G., Grollman, A. P., Johnson, F., & Breslauer, K. J. (1995) · Biochemistry · doi:10.1021/bi00049a030 · Cited by 178 · see citing works
Response of human DNA polymerase iota to DNA lesions
Zhang, Y. (2001) · Nucleic Acids Research · doi:10.1093/nar/29.4.928 · Cited by 146 · see citing works
Tornaletti, S., Maeda, L. S., Kolodner, R. D., & Hanawalt, P. C. (2004) · DNA repair · doi:10.1016/j.dnarep.2004.01.003 · Cited by 143 · see citing works
Response of human REV1 to different DNA damage: preferential dCMP insertion opposite the lesion
Zhang, Y. (2002) · Nucleic Acids Research · doi:10.1093/nar/30.7.1630 · Cited by 141 · see citing works
Moriya, M., & Grollman, A. P. (1993) · Molecular and General Genetics MGG · doi:10.1007/bf00281603 · Cited by 140 · see citing works
Fidelity of Nucleotide Insertion at 8-Oxo-7,8-dihydroguanine by Mammalian DNA Polymerase δ
Einolf, H. J., & Guengerich, F. P. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m006696200 · Cited by 132 · see citing works
Mutagenicity of a unique 8-oxoguanine in a human Ha-ras sequence in mammalian cells
Page, F. L., Margot, A., Grollman, A. P., et al. (1995) · Carcinogenesis · doi:10.1093/carcin/16.11.2779 · Cited by 129 · see citing works
Kamiya, H., Murata‐Kamiya, N., Koizume, S., Inoue, H., Nishimura, S., & Ohtsuka, E. (1995) · Carcinogenesis · doi:10.1093/carcin/16.4.883 · Cited by 128 · see citing works
Self-citationUnique misinsertion specificity of polι may decrease the mutagenic potential of deaminated cytosines
Vaisman, A., & Woodgate, R. (2001) · The EMBO Journal · doi:10.1093/emboj/20.22.6520 · Cited by 125 · see citing works
Tan, X., Grollman, A. P., & Shibutani, S. (1999) · Carcinogenesis · doi:10.1093/carcin/20.12.2287 · Cited by 119 · see citing works
Haracska, L., Prakash, S., & Prakash, L. (2003) · Molecular and Cellular Biology · doi:10.1128/mcb.23.4.1453-1459.2003 · Cited by 112 · see citing works
Inoue, M., Kamiya, H., Fujikawa, K., Ootsuyama, Y., Murata‐Kamiya, N., Osaki, T., Yasumoto, K., & Kasai, H. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.18.11069 · Cited by 109 · see citing works
Self-citationThe efficiency and fidelity of 8-oxo-guanine bypass by DNA polymerases δ and η
McCulloch, S. D., Kokoska, R., Garg, P., Burgers, P., & Kunkel, T. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp103 · Cited by 97 · see citing works
Trace amounts of 8-oxo-dGTP in mitochondrial dNTP pools reduce DNA polymerase replication fidelity
Pursell, Z. F., McDonald, J., Mathews, C. K., & Kunkel, T. A. (2008) · Nucleic Acids Research · doi:10.1093/nar/gkn062 · Cited by 86 · see citing works
Avkin, S., & Livneh, Z. (2002) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/s0027-5107(02)00254-3 · Cited by 84 · see citing works
Murata‐Kamiya, N., Kamiya, H., Muraoka, M., Kaji, H., & Kasai, H. (1997) · Journal of Radiation Research · doi:10.1269/jrr.38.121 · Cited by 83 · see citing works
Self-citationErroneous incorporation of oxidized DNA precursors by Y‐family DNA polymerases
Shimizu, M., Grúz, P., Kamiya, H., Kim, S.-R., Pisani, F. M., Masutani, C., Kanke, Y., Harashima, H., Hanaoka, F., & Nohmi, T. (2003) · EMBO Reports · doi:10.1038/sj.embor.embor765 · Cited by 73 · see citing works
Self-citationMaga, G., Crespan, E., Wimmer, U., van Loon, B., Amoroso, A., Mondello, C., Belgiovine, C., Ferrari, E. S., Locatelli, G. A., Villani, G., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0811241106 · Cited by 68 · see citing works
Repair and mutagenic potency of 8-oxoG:A and 8-oxoG:C base pairs in mammalian cells
Page, F. L. (1998) · Nucleic Acids Research · doi:10.1093/nar/26.5.1276 · Cited by 67 · see citing works
Kamiya, H. (1997) · Nucleic Acids Research · doi:10.1093/nar/25.2.304 · Cited by 62 · see citing works
Self-citation“Action-at-a-Distance” Mutagenesis
Efrati, E., Tocco, G., Eritja, R., Wilson, S. H., & Goodman, M. F. (1999) · Journal of Biological Chemistry · doi:10.1074/jbc.274.22.15920 · Cited by 61 · see citing works
Fazlieva, R., Spittle, C. S., Morrissey, D., Hayashi, H., Yan, H., & Matsumoto, Y. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp155 · Cited by 55 · see citing works
Translesion synthesis of 7,8-dihydro-8-oxo-2′-deoxyguanosine by DNA polymerase eta in vivo
Lee, D.-H., & Pfeifer, G. P. (2008) · Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis · doi:10.1016/j.mrfmmm.2008.02.006 · Cited by 53 · cited 2× · see citing works
“Lee and Pfeifer introduced MBL-treated plasmid DNA into human cells in which DNA pol η was knocked-down and mutated [35].”
BackgroundIn vitro Replication Study of Modified bases in ras Sequences.
Kamiya, H., SAKAGUCHI, T., MURATA, N., et al. (1992) · Chemical and Pharmaceutical Bulletin · doi:10.1248/cpb.40.2792 · Cited by 51 · see citing works
Self-citationStary, A., & Sarasin, A. R. (1992) · Journal of General Virology · doi:10.1099/0022-1317-73-7-1679 · Cited by 47 · see citing works
Wagner, J. E., Kamiya, H., & Fuchs, R. P. (1997) · Journal of Molecular Biology · doi:10.1006/jmbi.1996.0740 · Cited by 46 · see citing works
Self-citationMutagenic effects of 8-hydroxy-dGTP in live mammalian cells
Satou, K., Kawai, K., Kasai, H., Harashima, H., & Kamiya, H. (2007) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2007.02.024 · Cited by 45 · see citing works
Self-citationInvolvement of specialized DNA polymerases in mutagenesis by 8-hydroxy-dGTP in human cells
Satou, K., Hori, M., Kawai, K., Kasai, H., Harashima, H., & Kamiya, H. (2009) · DNA repair · doi:10.1016/j.dnarep.2008.12.009 · Cited by 42 · see citing works
Self-citationSuzuki, T., Harashima, H., & Kamiya, H. (2010) · DNA Repair · doi:10.1016/j.dnarep.2010.02.004 · Cited by 41 · see citing works
Self-citationEfficient and Erroneous Incorporation of Oxidized DNA Precursors by Human DNA Polymerase η
Shimizu, M., Grúz, P., Kamiya, H., Masutani, C., Xu, Y., Usui, Y., Sugiyama, H., Harashima, H., Hanaoka, F., & Nohmi, T. (2007) · Biochemistry · doi:10.1021/bi062238r · Cited by 39 · see citing works
Self-citationKoizume, S., Kamiya, H., Inoue, H., & Ohtsuka, E. (1994) · Nucleosides and Nucleotides · doi:10.1080/15257779408012168 · Cited by 38 · see citing works
Self-citationObata, F., Nunoshiba, T., Hashimoto-Gotoh, T., et al. (1998) · Journal of Radiation Research · doi:10.1269/jrr.39.263 · Cited by 37 · see citing works
Mutagenicities of 8-Hydroxyguanine and 2-Hydroxyadenine Produced by Reactive Oxygen Species
Kamiya, H. (2004) · Biological and Pharmaceutical Bulletin · doi:10.1248/bpb.27.475 · Cited by 37 · see citing works
Self-citationJohnson, R. E., Haracska, L., Prakash, L., & Prakash, S. (2006) · Molecular and Cellular Biology · doi:10.1128/mcb.00851-06 · Cited by 35 · see citing works
Buchko, G. W., Cadet, J., Morin, B., et al. (1995) · Nucleic Acids Research · doi:10.1093/nar/23.19.3954 · Cited by 32 · see citing works
Kamiya, H., Murata‐Kamiya, N., Fujimuro, M., et al. (1995) · Japanese Journal of Cancer Research · doi:10.1111/j.1349-7006.1995.tb03050.x · Cited by 31 · see citing works
Self-citationJAŁOSZYŃSKI, P. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg829 · Cited by 21 · see citing works
Kamiya, H. (2007) · Genes and Environment · doi:10.3123/jemsge.29.133 · Cited by 18 · see citing works
Self-citationYung, C.-W., Okugawa, Y., Otsuka, C., Okamoto, K., Arimoto, S., Loakes, D., Negishi, K., & Negishi, T. (2008) · Mutagenesis · doi:10.1093/mutage/gen044 · Cited by 9 · see citing works
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Sunlight damage to cellular DNA: focus on oxidatively generated lesions
Schuch, A. P., Moreno, N. C., Schuch, N. J., Menck, C. F. M., & Garcia, C. C. M. (2017) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2017.01.029 · Cited by 436 · see citing works
- Authors
- Kamiya, H., Yamaguchi, A., Suzuki, T., & Harashima, H.
- Affiliations
- Hokkaido University (JP)
- Corresponding author
- Kamiya, Hiroyuki
- Venue
- Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis
- Publisher
- Elsevier BV
- Published
- 2010-04
- Volume
- 686
- Issue
- 1-2
- Pages
- 90-95
- ISSN
- 0027-5107 (ISSN-L)
- 1386-1964
- OpenAlex
- W2048816529
- Cited by
- 40
- References
- 54
- Citations by year
- 2025: 2 · 2024: 3 · 2023: 2 · 2022: 2 · 2021: 2 · 2020: 2 · 2019: 3 · 2018: 4 · 2017: 1 · 2016: 4 · 2015: 3 · 2014: 2 · 2013: 4 · 2012: 2
- FWCI
- 1.30
- Type
- journal article
- Language
- en
- Open access
- green
- hdl.handle.net
- Licence
- Locations
- Mutation research. Fundamental and molecular mechanisms of mutagenesis (publishedVersion)
- PubMed (publishedVersion)
- Institutional Repositories DataBase (IRDB) (submittedVersion)
- Hokkaido University Collection of Scholarly and Academic Papers (Hokkaido University) (submittedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Carcinogens and Genotoxicity Assessment
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA and Nucleic Acid Chemistry
- Keywords
- 8-oxoguanine, DNA polymerase eta, DNA polymerase zeta, mutagenesis, nucleotide pools, DNA replication, transfection, siRNA knockdown, HEK293T cells, mutational pathways
- MeSH terms
- Y-Family DNA Polymerases, DNA-Directed DNA Polymerase, Guanine, Humans, Plasmids, Mutagenesis
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