The DOI matches its Crossref record; 7 of the 7 references it cites were found in a registry or an index.
BigNeuron: Large-Scale 3D Neuron Reconstruction from Optical Microscopy Images
Open accessAbstract
Understanding the structure of single neurons is critical for understanding how they function within neural circuits. BigNeuron is a new community effort that combines modern bioimaging informatics, recent leaps in labeling and microscopy, and the widely recognized need for openness and standardization to provide a community resource for automated reconstruction of dendritic and axonal morphology of single neurons.
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Citations
Cites
A mesoscale connectome of the mouse brain
Oh, S. W., Harris, J. A., Ng, L., Winslow, B., Cain, N., Mihalas, S., Wang, Q., Lau, C., Kuan, L., Henry, A. M., et al. (2014) · Nature · doi:10.1038/nature13186 · Cited by 2,612
Self-citationStructural and molecular interrogation of intact biological systems
Chung, K., Wallace, J., Kim, S.-Y., Kalyanasundaram, S., Andalman, A. S., Davidson, T. J., Mirzabekov, J. J., Zalocusky, K. A., Mattis, J., Denisin, A. K., et al. (2013) · Nature · doi:10.1038/nature12107 · Cited by 2,008
A GAL4-Driver Line Resource for Drosophila Neurobiology
Jenett, A., Rubin, G. M., Ngo, T.-T. B., Shepherd, D., Murphy, C., Dionne, H., Pfeiffer, B. D., Cavallaro, A., Hall, D., Jeter, J., et al. (2012) · Cell Reports · doi:10.1016/j.celrep.2012.09.011 · Cited by 1,449
Self-citationNew insights into the classification and nomenclature of cortical GABAergic interneurons
DeFelipe, J., López-Cruz, P. L., Benavides-Piccione, R., Bielza, C., Larrañaga, P., Anderson, S., Burkhalter, A., Cauli, B., Fairén, A., Feldmeyer, D., et al. (2013) · Nature Reviews Neuroscience · doi:10.1038/nrn3444 · Cited by 833
Self-citationPeng, H., Ruan, Z., Long, F., Simpson, J. H., & Myers, E. W. (2010) · Nature Biotechnology · doi:10.1038/nbt.1612 · Cited by 707
Self-citationNern, A., Pfeiffer, B. D., & Rubin, G. M. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1506763112 · Cited by 584 · cited 3×
“Several examples include Taiwan’s FlyCircuit.Org (Chiang et al., 2011) and Janelia’s FlyLight project (Nern et al., 2015), which focus on Drosophila CNS neurons; the BlueBrain project’s rat somatosensory neurondatabase (http://bluebrain.epfl.ch); and the Allen Institute’s Cell Types Database…”
BackgroundScorcioni, R., Polavaram, S., & Ascoli, G. A. (2008) · Nature Protocols · doi:10.1038/nprot.2008.51 · Cited by 354 · cited 1×
“Vaa3D has a rich set of functions and plugins for neuron quantification and is compatible with well-established neuron analysis tools such as L-Measure (Scorcioni et al., 2008).”
MethodSelf-citation
Cited by
Neuronal cell-type classification: challenges, opportunities and the path forward
Zeng, H., & Sanes, J. R. (2017) · Nature Reviews Neuroscience · doi:10.1038/nrn.2017.85 · Cited by 841
Winnubst, J., Bas, E., Ferreira, T. A., Wu, Z., Economo, M. N., Edson, P., Arthur, B. J., Bruns, C., Rokicki, K., Schauder, D., et al. (2019) · Cell · doi:10.1016/j.cell.2019.07.042 · Cited by 538
Self-citationGong, H., Xu, D., Yuan, J., Li, X., Guo, C., Peng, J., Li, Y., Schwarz, L. A., Li, A., Hu, B., et al. (2016) · Nature Communications · doi:10.1038/ncomms12142 · Cited by 368
Costa, M., Manton, J. D., Ostrovsky, A. D., Prohaska, S., & Jefferis, G. S. X. E. (2016) · Neuron · doi:10.1016/j.neuron.2016.06.012 · Cited by 294
Super-Resolution Mapping of Neuronal Circuitry With an Index-Optimized Clearing Agent
Ke, M.-T., Nakai, Y., Fujimoto, S., Takayama, R., Yoshida, S., Kitajima, T. S., Sato, M., & Imai, T. (2016) · Cell Reports · doi:10.1016/j.celrep.2016.02.057 · Cited by 264
Metadata
- Authors
- Peng, H., Hawrylycz, M., Roskams, J., Hill, S., Spruston, N., Meijering, E., & Ascoli, G. A.
- Venue
- Neuron
- Publisher
- Elsevier BV
- Published
- 2015-07
- Volume
- 87
- Issue
- 2
- Pages
- 252-256
- ISSN
- 0896-6273 (ISSN-L)
- OpenAlex
- W1508135620
- Cited by
- 232
- References
- 7
- FWCI
- 15.65
- Type
- journal article
- Language
- en
- Open access
- bronze
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- Peng, H., Hawrylycz, M., Roskams, J., Hill, S., Spruston, N., Meijering, E., & Ascoli, G. A. (2015). BigNeuron: Large-Scale 3D Neuron Reconstruction from Optical Microscopy Images. Neuron. https://doi.org/10.1016/j.neuron.2015.06.036
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
