Activity-dependent secretion of synaptic organizer Cbln1 from lysosomes in granule cell axons
Open accessAbstract
Synapse formation is achieved by various synaptic organizers. Although this process is highly regulated by neuronal activity, the underlying molecular mechanisms remain largely unclear. Here we show that Cbln1, a synaptic organizer of the C1q family, is released from lysosomes in axons but not dendrites of cerebellar granule cells in an activity- and Ca 2+-dependent manner. Exocytosed Cbln1 was retained on axonal surfaces by binding to its presynaptic receptor neurexin. Cbln1 further diffused laterally along the axonal surface and accumulated at boutons by binding postsynaptic δ2 glutamate receptors. Cbln1 exocytosis was insensitive to tetanus neurotoxin, accompanied by cathepsin B release, and decreased by disrupting lysosomes. Furthermore, overexpression of lysosomal sialidase Neu1 not only inhibited Cbln1 and cathepsin B exocytosis in vitro but also reduced axonal bouton formation in vivo. Our findings imply that co-release of Cbln1 and cathepsin B from lysosomes serves as a new mechanism of activity-dependent coordinated synapse modification.
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This led to the identification of some of the earliest disease-associated genes, including APP, PS1 and PS2 in AD, SNCA and LRRK2 in PD and MAPT and GRN in FTD.
“This subsequently led to the identification of some of the earliest disease-associated genes, including APP, PS1 and PS2 in AD, SNCA and LRRK2 in PD and MAPT and GRN in FTD.79–87”
From The lysosome and proteostatic stress at the intersection of pediatric neurological disorders and adult neurodegenerative diseases (2025) · cites this paper as [79]
The supplied passages and searches for APP, PS1, PS2, SNCA, LRRK2, MAPT, GRN, and early disease-gene identification found no passage addressing the claim. The paper instead discusses activity-dependent Cbln1 release from granule cells (Abstract; page unavailable). (LLM, conf=0.78)
Experimental — accuracy not yet measuredHeterozygous progranulin (GRN) mutations are associated with FTD with TDP-43 Type A pathology.
“Heterozygous progranulin (GRN) mutations are associated with FTD with TDP-43 Type A pathology.79,111”
From The lysosome and proteostatic stress at the intersection of pediatric neurological disorders and adult neurodegenerative diseases (2025) · cites this paper as [79]
The supplied Results and Discussion passages address Cbln1 secretion and cerebellar synapse formation, not progranulin mutations or FTD pathology. Searches for heterozygous GRN mutations, frontotemporal dementia, and TDP-43 Type A pathology found no passage in our copy addressing the claimed association. (LLM, conf=0.76)
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SAM68 Regulates Neuronal Activity-Dependent Alternative Splicing of Neurexin-1
Iijima, T., Wu, K., Witte, H., Hanno-Iijima, Y., Glatter, T., Richard, S., & Scheiffele, P. (2011) · Cell · doi:10.1016/j.cell.2011.11.028 · Cited by 279 · see citing works
v-SNARE composition distinguishes synaptic vesicle pools
Hua, Z., Leal-Ortiz, S., Foss, S. M., Waites, C. L., Garner, C. C., Voglmaier, S. M., & Edwards, R. H. (2011) · Neuron · doi:10.1016/j.neuron.2011.06.010 · Cited by 168 · see citing works
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- [1]1. Alberts, P. ∙ Rudge, R. ∙ Hinners, I. ... Cross talk between tetanus neurotoxin-insensitive vesicle-associated membrane protein-mediated transport and L1-mediated adhesion Mol. Biol. Cell. 2003; 14:4207-4220 Crossref Scopus (62) PubMed Google Scholar
- [2]2. Annunziata, I. ∙ Patterson, A. ∙ Helton, D. ... Lysosomal NEU1 deficiency affects amyloid precursor protein levels and amyloid-β secretion via deregulated lysosomal exocytosis Nat. Commun. 2013; 4:2734 Crossref Scopus (112) PubMed Google Scholar
- [3]3. Arantes, R.M. ∙ Andrews, N.W. A role for synaptotagmin VII-regulated exocytosis of lysosomes in neurite outgrowth from primary sympathetic neurons J. Neurosci. 2006; 26:4630-4637 Crossref Scopus (133) PubMed Google Scholar
- [4]4. Blott, E.J. ∙ Griffiths, G.M. Secretory lysosomes Nat. Rev. Mol. Cell Biol. 2002; 3:122-131 Crossref Scopus (612) PubMed Google Scholar
- [5]5. Cesa, R. ∙ Strata, P. Axonal competition in the synaptic wiring of the cerebellar cortex during development and in the mature cerebellum Neuroscience. 2009; 162:624-632 Crossref Scopus (49) PubMed Google Scholar
- [6]6. Chaineau, M. ∙ Danglot, L. ∙ Galli, T. Multiple roles of the vesicular-SNARE TI-VAMP in post-Golgi and endosomal trafficking FEBS Lett. 2009; 583:3817-3826 Crossref Scopus (121) PubMed Google Scholar
- [7]7. Chen, D. ∙ Lemons, P.P. ∙ Schraw, T. ... Molecular mechanisms of platelet exocytosis: role of SNAP-23 and syntaxin 2 and 4 in lysosome release Blood. 2000; 96:1782-1788 Crossref PubMed Google Scholar
- [8]8. Elegheert, J. ∙ Kakegawa, W. ∙ Clay, J.E. ... Structural basis for integration of GluD receptors within synaptic organizer complexes Science. 2016; 353:295-299 Crossref Scopus (100) PubMed Google Scholar
- [9]9. Ertunc, M. ∙ Sara, Y. ∙ Chung, C. ... Fast synaptic vesicle reuse slows the rate of synaptic depression in the CA1 region of hippocampus J. Neurosci. 2007; 27:341-354 Crossref Scopus (47) PubMed Google Scholar
- [10]10. Farías, G.G. ∙ Guardia, C.M. ∙ De Pace, R. ... BORC/kinesin-1 ensemble drives polarized transport of lysosomes into the axon Proc. Natl. Acad. Sci. USA. 2017; 114:E2955-E2964 Crossref Scopus (146) PubMed Google Scholar
- [11]11. Fournier, K.M. ∙ Robinson, M.B. A dominant-negative variant of SNAP-23 decreases the cell surface expression of the neuronal glutamate transporter EAAC1 by slowing constitutive delivery Neurochem. Int. 2006; 48:596-603 Crossref Scopus (27) PubMed Google Scholar
- [12]12. Fu, Y. ∙ Huang, Z.J. Differential dynamics and activity-dependent regulation of alpha- and beta-neurexins at developing GABAergic synapses Proc. Natl. Acad. Sci. USA. 2010; 107:22699-22704 Crossref Scopus (58) PubMed Google Scholar
- [13]13. Guo, Z. ∙ Turner, C. ∙ Castle, D. Relocation of the t-SNARE SNAP-23 from lamellipodia-like cell surface projections regulates compound exocytosis in mast cells Cell. 1998; 94:537-548 Full Text Full Text (PDF) Scopus (233) PubMed Google Scholar
- [14]14. Harward, S.C. ∙ Hedrick, N.G. ∙ Hall, C.E. ... Autocrine BDNF-TrkB signalling within a single dendritic spine Nature. 2016; 538:99-103 Crossref Scopus (233) PubMed Google Scholar
- [15]15. Hirai, H. ∙ Pang, Z. ∙ Bao, D. ... Cbln1 is essential for synaptic integrity and plasticity in the cerebellum Nat. Neurosci. 2005; 8:1534-1541 Crossref Scopus (272) PubMed Google Scholar
- [17]17. Iijima, T. ∙ Emi, K. ∙ Yuzaki, M. Activity-dependent repression of Cbln1 expression: mechanism for developmental and homeostatic regulation of synapses in the cerebellum J. Neurosci. 2009; 29:5425-5434 Crossref Scopus (30) PubMed Google Scholar
- [19]19. Ito-Ishida, A. ∙ Miura, E. ∙ Emi, K. ... Cbln1 regulates rapid formation and maintenance of excitatory synapses in mature cerebellar Purkinje cells in vitro and in vivo J. Neurosci. 2008; 28:5920-5930 Crossref Scopus (91) PubMed Google Scholar
- [20]20. Ito-Ishida, A. ∙ Miyazaki, T. ∙ Miura, E. ... Presynaptically released Cbln1 induces dynamic axonal structural changes by interacting with GluD2 during cerebellar synapse formation Neuron. 2012; 76:549-564 Full Text Full Text (PDF) Scopus (53) PubMed Google Scholar
- [21]21. Jahn, R. ∙ Scheller, R.H. SNAREs--engines for membrane fusion Nat. Rev. Mol. Cell Biol. 2006; 7:631-643 Crossref Scopus (2072) PubMed Google Scholar
- [22]22. Kakegawa, W. ∙ Mitakidis, N. ∙ Miura, E. ... Anterograde C1ql1 signaling is required in order to determine and maintain a single-winner climbing fiber in the mouse cerebellum Neuron. 2015; 85:316-329 Full Text Full Text (PDF) Scopus (137) PubMed Google Scholar
- [23]23. Kakegawa, W. ∙ Katoh, A. ∙ Narumi, S. ... Optogenetic control of synaptic AMPA receptor endocytosis reveals roles of LTD in motor learning Neuron. 2018; 99:985-998.e6 Full Text Full Text (PDF) Scopus (65) PubMed Google Scholar
- [24]24. Kitamura, T. ∙ Koshino, Y. ∙ Shibata, F. ... Retrovirus-mediated gene transfer and expression cloning: powerful tools in functional genomics Exp. Hematol. 2003; 31:1007-1014 Full Text Full Text (PDF) Scopus (492) PubMed Google Scholar
- [25]25. Krishnan, V. ∙ Stoppel, D.C. ∙ Nong, Y. ... Autism gene Ube3a and seizures impair sociability by repressing VTA Cbln1 Nature. 2017; 543:507-512 Crossref Scopus (104) PubMed Google Scholar
- [26]26. Luzio, J.P. ∙ Pryor, P.R. ∙ Bright, N.A. Lysosomes: fusion and function Nat. Rev. Mol. Cell Biol. 2007; 8:622-632 Crossref Scopus (1347) PubMed Google Scholar
- [27]27. Maex, R. ∙ De Schutter, E. Synchronization of golgi and granule cell firing in a detailed network model of the cerebellar granule cell layer J. Neurophysiol. 1998; 80:2521-2537 Crossref Scopus (185) PubMed Google Scholar
- [28]28. Martinez-Arca, S. ∙ Alberts, P. ∙ Zahraoui, A. ... Role of tetanus neurotoxin insensitive vesicle-associated membrane protein (TI-VAMP) in vesicular transport mediating neurite outgrowth J. Cell Biol. 2000; 149:889-900 Crossref Scopus (178) PubMed Google Scholar
- [29]29. Martinez-Arca, S. ∙ Coco, S. ∙ Mainguy, G. ... A common exocytotic mechanism mediates axonal and dendritic outgrowth J. Neurosci. 2001; 21:3830-3838 Crossref PubMed Google Scholar
- [30]30. Matsuda, K. ∙ Yuzaki, M. Cbln family proteins promote synapse formation by regulating distinct neurexin signaling pathways in various brain regions Eur. J. Neurosci. 2011; 33:1447-1461 Crossref Scopus (131) PubMed Google Scholar
- [31]31. Matsuda, N. ∙ Lu, H. ∙ Fukata, Y. ... Differential activity-dependent secretion of brain-derived neurotrophic factor from axon and dendrite J. Neurosci. 2009; 29:14185-14198 Crossref Scopus (208) PubMed Google Scholar
- [32]32. Matsuda, K. ∙ Miura, E. ∙ Miyazaki, T. ... Cbln1 is a ligand for an orphan glutamate receptor δ2, a bidirectional synapse organizer Science. 2010; 328:363-368 Crossref Scopus (294) PubMed Google Scholar
- [33]33. Miesenböck, G. ∙ De Angelis, D.A. ∙ Rothman, J.E. Visualizing secretion and synaptic transmission with pH-sensitive green fluorescent proteins Nature. 1998; 394:192-195 Crossref Scopus (2094) PubMed Google Scholar
- [34]34. Miura, E. ∙ Matsuda, K. ∙ Morgan, J.I. ... Cbln1 accumulates and colocalizes with Cbln3 and GluRδ2 at parallel fiber-Purkinje cell synapses in the mouse cerebellum Eur. J. Neurosci. 2009; 29:693-706 Crossref Scopus (32) PubMed Google Scholar
- [35]35. Miyazaki, T. ∙ Yamasaki, M. ∙ Hashimoto, K. ... Cav2.1 in cerebellar Purkinje cells regulates competitive excitatory synaptic wiring, cell survival, and cerebellar biochemical compartmentalization J. Neurosci. 2012; 32:1311-1328 Crossref Scopus (68) PubMed Google Scholar
- [36]36. Mollinedo, F. ∙ Calafat, J. ∙ Janssen, H. ... Combinatorial SNARE complexes modulate the secretion of cytoplasmic granules in human neutrophils J. Immunol. 2006; 177:2831-2841 Crossref Scopus (100) PubMed Google Scholar
- [37]37. Muzerelle, A. ∙ Alberts, P. ∙ Martinez-Arca, S. ... Tetanus neurotoxin-insensitive vesicle-associated membrane protein localizes to a presynaptic membrane compartment in selected terminal subsets of the rat brain Neuroscience. 2003; 122:59-75 Crossref Scopus (38) PubMed Google Scholar
- [38]38. Naegeli, K.M. ∙ Hastie, E. ∙ Garde, A. ... Cell invasion in vivo via rapid exocytosis of a transient lysosome-derived membrane domain Dev. Cell. 2017; 43:403-417.e10 Full Text Full Text (PDF) Scopus (58) PubMed Google Scholar
- [39]39. Padamsey, Z. ∙ McGuinness, L. ∙ Bardo, S.J. ... Activity-dependent exocytosis of lysosomes regulates the structural plasticity of dendritic spines Neuron. 2017; 93:132-146 Full Text Full Text (PDF) Scopus (123) PubMed Google Scholar
- [40]40. Park, H. ∙ Poo, M.M. Neurotrophin regulation of neural circuit development and function Nat. Rev. Neurosci. 2013; 14:7-23 Crossref Scopus (1504) PubMed Google Scholar
- [41]41. Paumet, F. ∙ Le Mao, J. ∙ Martin, S. ... Soluble NSF attachment protein receptors (SNAREs) in RBL-2H3 mast cells: functional role of syntaxin 4 in exocytosis and identification of a vesicle-associated membrane protein 8-containing secretory compartment J. Immunol. 2000; 164:5850-5857 Crossref Scopus (196) PubMed Google Scholar
- [42]42. Penny, C.J. ∙ Kilpatrick, B.S. ∙ Han, J.M. ... A computational model of lysosome-ER Ca2+ microdomains J. Cell Sci. 2014; 127:2934-2943 Crossref Scopus (56) PubMed Google Scholar
- [43]43. Ren, Q. ∙ Barber, H.K. ∙ Crawford, G.L. ... Endobrevin/VAMP-8 is the primary v-SNARE for the platelet release reaction Mol. Biol. Cell. 2007; 18:24-33 Crossref Scopus (138) PubMed Google Scholar
- [44]44. Rong, Y. ∙ Wei, P. ∙ Parris, J. ... Comparison of Cbln1 and Cbln2 functions using transgenic and knockout mice J. Neurochem. 2012; 120:528-540 Crossref Scopus (29) PubMed Google Scholar
- [45]45. Sakaba, T. ∙ Stein, A. ∙ Jahn, R. ... Distinct kinetic changes in neurotransmitter release after SNARE protein cleavage Science. 2005; 309:491-494 Crossref Scopus (124) PubMed Google Scholar
- [46]46. Sankaranarayanan, S. ∙ Ryan, T.A. Calcium accelerates endocytosis of vSNAREs at hippocampal synapses Nat. Neurosci. 2001; 4:129-136 Crossref Scopus (258) PubMed Google Scholar
- [47]47. Schiavo, G. ∙ Benfenati, F. ∙ Poulain, B. ... Tetanus and botulinum-B neurotoxins block neurotransmitter release by proteolytic cleavage of synaptobrevin Nature. 1992; 359:832-835 Crossref Scopus (1554) PubMed Google Scholar
- [48]48. Shaner, N.C. ∙ Campbell, R.E. ∙ Steinbach, P.A. ... Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein Nat. Biotechnol. 2004; 22:1567-1572 Crossref Scopus (3708) PubMed Google Scholar
- [49]49. Takeo, Y.H. ∙ Kakegawa, W. ∙ Miura, E. ... RORα regulates multiple aspects of dendrite development in cerebellar Purkinje cells in vivo J. Neurosci. 2015; 35:12518-12534 Crossref Scopus (41) PubMed Google Scholar
- [50]50. Tanaka, H. ∙ Fujii, S. ∙ Hirano, T. Live-cell imaging of receptors around postsynaptic membranes Nat. Protoc. 2014; 9:76-89 Crossref Scopus (10) PubMed Google Scholar
- [51]51. Terauchi, A. ∙ Johnson-Venkatesh, E.M. ∙ Bullock, B. ... Retrograde fibroblast growth factor 22 (FGF22) signaling regulates insulin-like growth factor 2 (IGF2) expression for activity-dependent synapse stabilization in the mammalian brain eLife. 2016; 5:e12151 Crossref Scopus (33) PubMed Google Scholar
- [52]52. Uemura, T. ∙ Lee, S.J. ∙ Yasumura, M. ... Trans-synaptic interaction of GluRδ2 and Neurexin through Cbln1 mediates synapse formation in the cerebellum Cell. 2010; 141:1068-1079 Full Text Full Text (PDF) Scopus (397) PubMed Google Scholar
- [53]53. Voglmaier, S.M. ∙ Kam, K. ∙ Yang, H. ... Distinct endocytic pathways control the rate and extent of synaptic vesicle protein recycling Neuron. 2006; 51:71-84 Full Text Full Text (PDF) Scopus (335) PubMed Google Scholar
- [54]54. Wei, P. ∙ Smeyne, R.J. ∙ Bao, D. ... Mapping of Cbln1-like immunoreactivity in adult and developing mouse brain and its localization to the endolysosomal compartment of neurons Eur. J. Neurosci. 2007; 26:2962-2978 Crossref Scopus (30) PubMed Google Scholar
- [55]55. Wei, P. ∙ Pattarini, R. ∙ Rong, Y. ... The Cbln family of proteins interact with multiple signaling pathways J. Neurochem. 2012; 121:717-729 Crossref Scopus (48) PubMed Google Scholar
- [56]56. Yamasaki, S. ∙ Baumeister, A. ∙ Binz, T. ... Cleavage of members of the synaptobrevin/VAMP family by types D and F botulinal neurotoxins and tetanus toxin J. Biol. Chem. 1994; 269:12764-12772
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The needs of a synapse—How local organelles serve synaptic proteostasis
Grochowska, K. M., Andres‐Alonso, M., Karpova, A., & Kreutz, M. R. (2022) · The EMBO Journal · doi:10.15252/embj.2021110057 · Cited by 38 · see citing works
Lane-Donovan, C., Paredes, M., & Kao, A. W. (2025) · Progress in Neurobiology · doi:10.1016/j.pneurobio.2025.102854 · Cited by 3 · see citing works
- Authors
- Ibata, K., Kono, M., Narumi, S., Motohashi, J., Kakegawa, W., Kohda, K., & Yuzaki, M.
- Affiliations
- St. Marianna University School of Medicine (JP)
- Keio University (JP)
- Corresponding author
- Yuzaki, Michisuke
- Venue
- Neuron
- Publisher
- Elsevier BV
- Published
- 2019-06
- Volume
- 102
- Issue
- 6
- Pages
- 1184-1198.e10
- ISSN
- 0896-6273 (ISSN-L)
- OpenAlex
- W2943033141
- Cited by
- 56
- References
- 2
- Citations by year
- 2026: 6 · 2025: 9 · 2024: 2 · 2023: 6 · 2022: 12 · 2021: 11 · 2020: 8 · 2019: 2
- FWCI
- 3.94
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Neuron (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Ministry of Education, Culture, Sports, Science and Technology (15H05772, 16H06461, 16K13107)
- Core Research for Evolutional Science and Technology
- Japan Science and Technology Agency (JPMJCR1854)
- Topics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
- Keywords
- Cbln1, synaptic organizer, lysosomal exocytosis, cerebellar granule cells, axons, activity-dependent synaptic plasticity, cathepsin B, neurexin, presynaptic receptors, calcium-dependent secretion
- MeSH terms
- Animals, Axons, Cathepsin B, Cerebellum, Dendrites, Exocytosis, Lysosomes, Metalloendopeptidases, Nerve Tissue Proteins, Neuraminidase, Neuronal Plasticity, Neurons, Protein Precursors, Purkinje Cells, Tetanus Toxin, Cell Adhesion Molecules, Neuronal, Receptors, Glutamate, Presynaptic Terminals, Mice, In Vitro Techniques
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