Cited by 138Soil Carbon and Nitrogen DynamicsMicrobial Community Ecology and PhysiologyMycorrhizal Fungi and Plant Interactions

Recent (<4 year old) leaf litter is not a major source of microbial carbon in a temperate forest mineral soil

Open access
Kramer, Christiane, Trumbore, Susan, Fröberg, Mats, Cisneros Dozal, Luz Maria, Zhang, Dachun, Xu, Xiaomei, Santos, Guaciara M., Hanson, Paul J.·2010·Soil Biology and Biochemistry

Abstract

Microbial communities in soil A horizons derive their carbon from several potential sources: organic carbon (C) transported down from overlying litter and organic horizons, root-derived C, or soil organic matter. We took advantage of a multi-year experiment that manipulated the 14C isotope signature of surface leaf litter inputs in a temperate forest at the Oak Ridge Reservation, Tennessee, USA, to quantify the contribution of recent leaf litter C to microbial respiration and biomarkers in the underlying mineral soil. We observed no measurable difference ( 4 years) old (which fell after (or prior to) the manipulation and therefore did not differ between plots) are not supported because the 14C signatures of the PLFA compounds (averaging 200–220‰) is much higher that of the 2004–5 leaf litter (115‰) or pre-2000 litter. A mesocosm experiment further demonstrated that C leached from 14C-enriched surface litter or the O horizon was not a detectable C source in underlying mineral soil microbes during the first eight months after litter addition. Instead a decline in the 14C of PLFA over the mesocosm experiment likely reflected the loss of a pre-existing substrate not associated with added leaf litter. Measured PLFA Δ14C signatures were higher than those measured in bulk mineral soil organic matter in our experiments, but fell within the range of 14C values measured in mineral soil roots. Together, our experiments suggest that root-derived C is the major (>60%) source of C for microbes in these temperate deciduous forest soils.

AI snapshot

Written from the paper’s full text.

TL;DR

Using a multi-year 14C leaf-litter manipulation in a temperate forest, this study found that recent (<4-year-old) surface leaf litter contributed little to microbial carbon in underlying mineral soil. Root-derived carbon was instead inferred to be the major (>60%) microbial C source.

Key findings

  • After 3 years of high- vs. low-14C litter addition, PLFA radiocarbon signatures in 0–10 cm mineral soil differed little; estimated litter-derived microbial C was <6% after 4 years, with PLFA-based F values <12% and most not different from zero.
  • Heterotrophic respiration incubations gave F values of 2–8% for litter-derived C during the three years of labeled litter addition.
  • PLFA Δ14C averaged 202 ± 19‰ (low-14C) and 236 ± 56‰ (high-14C) at Haw Ridge, and 208 ± 39‰ (low-14C) and 215 ± 44‰ (high-14C) at Walker Branch, higher than bulk mineral soil organic matter and closer to root values.
  • In mesocosms, A-horizon PLFA Δ14C declined from 134 ± 33‰ in March to 120 ± 45‰ in November after 14C-enriched litter addition, indicating loss of a pre-existing C source rather than incorporation of added litter C.

Methods

  • Long-term EBIS plots at Oak Ridge Reservation, Tennessee, USA: replicated 7×7 m plots received high-14C (~950–990‰) or low-14C (~210–220‰) leaf litter for three years (2001–2004); mineral soil 0–10 cm was sampled in 2005 for PLFA analysis at Walker Branch (Ultisol) and Haw Ridge (Entisol).
  • Microbial respiration was measured by incubating intact 0–5 cm soil cores from Ultisol plots in 2002–2004 and measuring 14C of heterotrophically respired CO2.
  • Mesocosm experiment in 2006 used constructed L/Oa/A horizons with 14C-enriched oak litter; A-horizon PLFA was sampled before litter addition and ~8 months after. PLFA compounds were isolated by preparative capillary GC and analyzed by AMS for radiocarbon.

Limitations

  • The paper states that its F calculation only assesses litter C that is 1–4 years old, because litterfall <1 year old and >4 years old did not differ in 14C between treatments; this may underestimate the overall leaf litter contribution.
  • The paper states that PLFA radiocarbon measurements, especially for very small samples (<30 µg C), had large uncertainties due to contamination during PCGC processing and background corrections; duplicate/replicate analyses showed large errors, and two anomalous compounds lacked a good explanation.
  • The paper states that it cannot rule out higher F values if measurements were made within days to weeks of litter addition, and that greater temporal resolution in respiration sampling showed possible larger contributions (up to 8–12%) in spring.

Model-written summary. Check it against the paper before relying on it.

Integrity signals

Registry

Crossref · 10.1016/j.soilbio.2010.02.021

Cites

Statistics

Nothing to recompute.

Claims the paper makes

0 of 38 cited sources checked · 0 supported · 0 flagged

  • Findingown data

    O-horizons collected in 2005 had a clearer signal of C incorporated from 3 years of different litter application: 200 ± 12‰ (low) and 361 ± 25‰ (elevated) at Walker Branch, and 186 ± 10‰ (low) and 308 ± 80‰ (elevated) at Haw Ridge.

    “O-horizons collected in 2005 had a clearer signal of C incorporated from the 3 years of different litter application: 200 Æ 12& (low) and 361 Æ 25& (elevated) at Walker Branch, and 186 Æ 10& (low) and 308 Æ 80& (elevated) at Haw Ridge sites (Fig. 1).”
    Quote in the paperNot a substantial claim
  • Findingown data

    Litterfall radiocarbon in autumn 2004 had 14C values of +110-120‰ at Haw Ridge and Walker Branch.

    “Litterfall radiocarbon in that year had 14 C values of þ110e120& at Haw Ridge and Walker Branch.”
    Quote in the paperNot a substantial claim
  • Findingown data

    No measurable difference (<~40‰ given the current analytical methods) was observed in the radiocarbon signatures of microbial PLFA isolated from the top 10 cm of mineral soil in plots that experienced 3 years of litterfall differing by ~750‰ between high-14C and low-14C treatments.

    “We observed no measurable difference (<w40& given our current analytical methods) in the radiocarbon signatures of microbial phospholipid fatty acids (PLFA) isolated from the top 10 cm of mineral soil in plots that experienced 3 years of litterfall that differed in each year by w750& between high-14 C and low-14 C treatments.”
    Quote in the paperSubstantial claim
  • Findingown data

    The 14C signatures of PLFA compounds averaged 200-220‰, much higher than that of the 2004-5 leaf litter (115‰) or pre-2000 litter.

    “the 14 C signatures of the PLFA compounds (averaging 200e220&) is much higher that of the 2004e5 leaf litter (115&) or pre-2000 litter.”
    Quote in the paperSubstantial claim
  • Findingown data

    In a mesocosm experiment, C leached from 14C-enriched surface litter or the O horizon was not a detectable C source in underlying mineral soil microbes during the first eight months after litter addition.

    “A mesocosm experiment further demonstrated that C leached from 14 C-enriched surface litter or the O horizon was not a detectable C source in underlying mineral soil microbes during the first eight months after litter addition.”
    Quote in the paperSubstantial claim
  • Classified as probably not a substantial claim. 23
  • May combine two claims. 41
  • The quote only partly states this claim. 2
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Findingown data

    Replicated samples (n=4) of bulk 14C values for 0-15 cm depth collected in September 2005 had slightly lower 14C values and a similar pattern: 90 ± 4‰ (low) and 92 ± 16‰ (elevated) for Walker Branch and 105 ± 4‰ (low) and 120 ± 15‰ (elevated) for Haw Ridge.

    “Replicated samples (n ¼ 4) of bulk 14 C values for the 0e15 cm depth collected in September 2005 had slightly lower 14 C values as they integrated C deeper in the soil, but showed a similar pattern (Hanson, unpublished data): 90 Æ 4& (low) and 92 Æ 16& (elevated) for Walker Branch and 105 Æ 4& (low) and 120 Æ 15& (elevated) for Haw Ridge.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Measured PLFA Δ14C signatures were higher than those measured in bulk mineral soil organic matter in the experiments, but fell within the range of 14C values measured in mineral soil roots.

    “Measured PLFA D 14 C signatures were higher than those measured in bulk mineral soil organic matter in our experiments, but fell within the range of 14 C values measured in mineral soil roots.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Findingown data

    The plant material picked out included leaves and some roots and had Δ14C values ranging from 177-195‰ for low-14C litter plots to 319-384‰ for elevated-14C litter plots.

    “The plant material picked out included leaves and some roots and had D 14 C values ranged from 177e195& for low-14 C litter plots to 319e384& for elevated-14 C litter plots.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Gram-negative bacteria tended to have higher Δ14C values compared to the average, and declined less over the 8-month period.

    “Gram-negative bacteria tended to have higher D 14 C values compared to the average, and declined less over the 8-month period.”
    Quote in the paperNot a substantial claim
    • Rests on an assumption: Saturated PLFA, especially branched compounds, are generally associated with Gram-positive bacteria, while monounsaturated and cyclopropyl-substituted PLFA are associated with Gram-negative bacteria.
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Findingown data

    Replicate and duplicate analyses fell within the 2-sigma error of the calculated mean for all but one of the compounds (WB3; 18cy).

    “While the quoted errors are large, especially for small samples, the replicate and duplicate analyses fall within the 2sigma error of the calculated mean for all but one of the compounds (WB3; 18cy; Table 1).”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Findingown data

    There is some indication from the microbial respiration data that a larger contribution of C (up to 8-12%) occurs in spring compared to later in the growing season.

    “There is some indication from the microbial respiration data that a larger contribution of C (up to 8e12%) occurs in spring (Fig. 3 and Cisneros Dozal et al., 2006) compared to later in the growing season.”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Cisneros Dozal et al., 2006

      Not checked in the free run.

  • May combine two claims.

    Findingown data

    Differences between individual PLFA biomarkers measured in this study were small and mostly not significant.

    “However, the differences between individual biomarkers measured in this study were small and mostly not significant.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Findingown data

    Mean values of Gram-negative bacteria and the fungal PLFA marker 18:2ω6 tend to be greater than Gram-positive PLFA values regardless of treatment, though differences are mostly not significant.

    “Mean values of Gram-negative bacteria and the fungal PLFA marker 18:2 u6 tend to be greater than Gram-positive PLFA values regardless of treatment (Table 2), though differences are mostly not significant.”
    Quote in the paperNot a substantial claim
    • Rests on an assumption: Saturated PLFA, especially branched compounds, are generally associated with Gram-positive bacteria, while monounsaturated and cyclopropyl-substituted PLFA are associated with Gram-negative bacteria.
    • Rests on an assumption: The PLFA 18:2ω6 is characteristic for fungi.
  • May combine two claims.

    Findingown data

    Errors were not different between duplicate and replicate samples, and the standard deviation associated with the mean of the replicates was of similar magnitude to the error for each sample.

    “Errors were not different between duplicate and replicate samples, and the standard deviation associated with the mean of the replicates was of similar magnitude to the error for each sample.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Findingown data

    The amount of 14C-free C added by the PCGC varied from near zero to ~2 μg C, though the amount was not predictable from the number of injections.

    “The amount of 14 C-free C added by the PCGC varied from near zero to w2 mg C, though the amount was not predictable from the number of injections.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    Measures of two proxies for microbial C sources in mineral soil both show that <10% of the C in or respired by microbes is derived from surface leaf litter that had been manipulated in 14C content; the manipulations took place either 1-4 years (EBIS plots) or <1 year (mesocosms) ago.

    “Measures of two proxies for microbial C sources in mineral soil both show that <10% of the C in or respired by microbes is derived from surface leaf litter that had been manipulated in 14 C content; the manipulations took place either 1e4 years (EBIS plots) or <1 year (mesocosms) ago.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Depending on the compound isolated, there is either no difference in the 14C of PLFA over the course of 8 months, or there is a decline of up to 40-60‰.

    “Depending on the compound isolated, there is either no difference in the 14 C of PLFA over the course of 8 months, or there is a decline of up to 40e60& (Figs. 3 and 4).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Differences in PLFA result in F values <12%, most are not different from zero given the large analytical errors.

    “Differences in PLFA result in F values <12% (Table 2), most are not different from zero given the large analytical errors.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Both measures of microbial C source 14C signatures-microbial respiration and individual PLFA biomarkers-show either small or no differences between high- and low-14C litter addition plots.

    “Both measures of microbial C source 14 C signatures e microbial respiration and individual PLFA biomarkers e show either small or no differences between high-and low-14 C litter addition plots.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Although the 14C associated with labeled litter additions resulted in a cumulative difference in the 14C of Oa horizons over three years, there was no apparent accumulation of litter-derived C products in soil A horizon microbes over time.

    “Although the 14 C associated with labeled litter additions resulted in a cumulative difference in the 14 C of Oa horizons over three years, there was no apparent accumulation of litter-derived C products in soil A horizon microbes over time.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Overall, PLFA averaged 202 ± 19‰ (low-14C) and 236 ± 56‰ (high-14C) for the Haw Ridge sites, not distinguishable from values at the Walker Branch site of 208 ± 39‰ (low-14C) and 215 ± 44‰ (high-14C).

    “Overall, PLFA averaged 202 Æ 19& (low-14 C) and 236 Æ 56& (high-14 C) for the Haw Ridge sites, not distinguishable from values at the Walker Branch site of 208 Æ 39& (low-14 C) and 215 Æ 44& (high-14 C).”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Findingown data

    There is an overall increasing trend in the 14C signature over time for both plots, though in 2003/2004 this is complicated by more 14C releases at the ORR sites.

    “There is an overall increasing trend in the 14 C signature over time for both plots, though in 2003/2004 this is complicated by more 14 C releases at the ORR sites.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Findingown data

    The 14C signature of the PLFA sampled in 2005 average 200-220‰, while the litter that fell in autumn of 2004 had Δ14C of 110-120‰ in both plots.

    “The 14 C signature of the PLFA sampled in 2005 (Fig. 1) average 200e220&, while the litter that fell in autumn of 2004 had D 14 C of 110e120& in both plots.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Differences between elevated- and low-14C litter addition plots sampled in August 2005 ranged from <20-30‰ in bulk (plant litter removed) soils from which PLFA were extracted to ~120-190‰ for overlying O horizon material, from an original difference of ~750‰ between litter treatments.

    “Differences between elevated-and low-14 C litter addition plots sampled in August 2005 thus ranged from <20e30& in the bulk (plant litter removed) soils from which PLFA were extracted to w120e190& for the overlying O horizon material, from an original difference of w750& between litter treatments (Fig. 1).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Premisecitation

    Complexities of vertical dissolved C transfer, especially sorption and desorption in the O horizon, alter the nature and age of DOC entering mineral soil and may delay the appearance of litter-derived C in A horizon organic matter for up to several years.

    “Complexities associated with the vertical transfer of dissolved C within soil profiles, especially significant sorption and desorption within the O horizon, alters the nature and age of DOC that enters the mineral soil (Fröberg et al., 2003), and may add a time lag to delay the appearance of litter-derived C in A horizon organic matter for up to several years.”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Fröberg et al., 2003

      Not checked in the free run.

  • Classified as probably not a substantial claim.

    Premisecitation

    Carbon isotopic signatures of PLFA have been used to identify microbial C sources in a number of studies.

    “Carbon isotopic signatures of PLFA have been used to identify microbial C sources in a number of studies (Bird et al., 2008;Brant et al., 2006b;Denef et al., 2009;Kramer and Gleixner, 2006;Moore-Kucera and Dick, 2008;Rethemeyer et al., 2004;Rubino et al., 2009;Waldrop et al., 2000;Waldrop and Firestone, 2006).”
    Quote in the paperSubstantial claim0 of 3 sources checked
    • cites Bird et al., 2008

      Not checked in the free run.

    • cites Brant et al., 2006b

      Not checked in the free run.

    • cites Denef et al., 2009

      Not checked in the free run.

  • Classified as probably not a substantial claim. May combine two claims.

    Premisecitation

    Mass balancing of C and 14C inputs and losses suggested that sequestration of DOC in the A horizon would have increased Δ14C in soil organic matter by only about 5‰, too small to detect.

    “Mass balancing of both C and 14 C inputs and losses suggested that sequestration of DOC in the A horizon would have increased the D 14 C in soil organic matter by only about 5&.Such a small change was not large enough to detect (Fröberg et al., 2009).”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Fröberg et al., 2009

      Not checked in the free run.

  • May combine two claims.

    Interpretationown data

    Large contributions of C from litter <1 year old or >4 years old to microbial PLFA are not supported.

    “Large contributions of C from litter < 1 year (or >4 years) old (which fell after (or prior to) the manipulation and therefore did not differ between plots) are not supported because the 14 C signatures of the PLFA compounds (averaging 200e220&) is much higher that of the 2004e5 leaf litter (115&) or pre-2000 litter.”
    Quote in the paperSubstantial claim
  • Classified as probably not a substantial claim. May combine two claims.

    Study design and conductnone given

    As defined in Eq. (3), F indicates only the influence of leaf litter carbon that is >1 up to 4 years old in the PLFA sampled from the EBIS plots and for microbially respired CO2.

    “As defined in Eq. ( 3), F indicates only the influence of leaf litter carbon that is >1 up to 4 years old in the PLFA we sampled from the EBIS plots; for microbially respired CO 2 .”
    Quote in the paperSubstantial claim
  • Classified as probably not a substantial claim.

    Study design and conductown data

    Modern and fossil 14C contamination introduced in combustion and graphitization was assessed by measuring samples of different sizes derived from an oxalic acid standard or coal.

    “We assessed the amount of 'modern' and 'fossil' (i.e.radiocarbon-free) 14 C contamination introduced in the combustion and graphitization procedures by measuring a series of samples of different sizes (spanning 5 mg to 1 mg) derived from a combusted and graphitized oxalic acid standard (modern) or coal ( 14 C-free material).”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductcitation

    The precision and accuracy for measurements of graphite targets by AMS are determined by measuring known-age standards; for standards that are not small samples, these are ±2-3‰ at the WM Keck Carbon Cycle AMS.

    “The precision and accuracy for measurements of graphite targets by AMS are determined by measuring of known-age standards e for standards that are not small samples, these are Æ2e3& at the WM Keck Carbon Cycle AMS (Xu et al., 2007).”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Xu et al., 2007

      Not checked in the free run.

  • Classified as probably not a substantial claim. May combine two claims.

    Premisecitation

    PLFA are compounds found in living microbial cell walls and are frequently used as characteristic biomarkers for microbial community structure.

    “Phosphlipid Fatty Acids (PLFA) are compounds found in living microbial cell walls and are frequently used as characteristic biomarkers for microbial community structure (see review by Leckie, 2005).”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Leckie, 2005

      Not checked in the free run.

  • May combine two claims.

    Study design and conductown data

    The F calculation ignores that litterfall in 2004 and prior to 2000 did not differ in 14C between plots, so it could be underestimating the contribution of recent (<1 year) or pre-treatment (>4 years) litter C to PLFA-C.

    “This ignores the fact that litterfall in 2004 (and prior to 2000) did not differ in its 14 C signature between the two plots.We are thus not strictly calculating the only from leaf litter added in the experiment e and therefore could be underestimating the contribution of recent (<1 year) or pre-treatment (>4 years) litter C to PLFA-C.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Premisenone given

    Much of the bulk organic matter is in forms that turn over slowly and may therefore mask changes in more labile C fractions in the total C pool.

    “However, much of the bulk organic matter is in forms that turn over slowly, and may therefore mask changes in more labile C fractions in the total C pool.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Interpretationcitation

    The 2004 litterfall 14C values are higher than the background atmosphere in 2004, reflecting either 14C residual in plant storage pools and/or additional 14C releases at the sites.

    “These values are higher than the background atmosphere in 2004, reflecting either 14 C residual in plant storage pools (Gaudinski et al., 2009), and/or additional 14 C releases at the sites.”
    Quote in the paperNot a substantial claim0 of 1 sources checked
    • cites Gaudinski et al., 2009

      Not checked in the free run.

  • May combine two claims.

    Premisecitation

    There was no measurable change in the 14C of A horizon soil C in Fröberg et al. (2009), because overall DOC input to the A horizon was small compared to C stocks.

    “There was no measurable change in the 14 C of A horizon soil C, however, as the overall DOC input to the A horizon was small compared to C stocks.”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Fröberg et al., 2009

      Not checked in the free run.

  • May combine two claims.

    Premisecitation

    Fröberg et al. (2009) showed that DOC was isotopically altered but not retained in the O horizon, and that some high-14C C derived from surface litter was sequestered in the A horizon.

    “That study showed that DOC was isotopically altered (but not retained) in the O horizon, and that some of the high-14 C C derived from surface litter was sequestered in the A horizon.”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Fröberg et al., 2009

      Not checked in the free run.

  • May combine two claims.

    Interpretationown data

    Radiocarbon signatures of plant material picked out of the soil used for PLFA analysis were similar to those of the O horizon and likely represent O horizon material incorporated into the very large sample.

    “Radiocarbon signatures of plant material picked out of the soil used for PLFA analysis had 14 C signatures similar to those of the O horizon, and likely represent O horizon material that was incorporated into the very large sample.”
    Quote in the paperSubstantial claim
  • Classified as probably not a substantial claim.

    Study design and conductreasoning

    Because the PCGC correction factor varied with time and the cause was unknown, uncertainty in this correction factor was increased for each sample wheel run until all standards overlapped at 1-sigma with the radiocarbon value measured for a 1 mg C sample of the same standard not passed through the PCGC.

    “Because the correction factor for the PCGC varied with time and we were unable to ascertain why, we increased the uncertainty in this correction factor for each sample wheel run until all standards overlapped at the 1-sigma level with the radiocarbon value measured for a 1 mg C sample of the same standard that was not passed through the PCGC (Santos et al., 2007;in press).”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Santos et al., 2007;in press

      Not checked in the free run.

  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    A picture is emerging in which root-derived C is apparently the predominant source of mineral soil organic matter in forest soils.

    “Nonetheless, a picture is emerging in which rootderived C is apparently the predominant source of mineral soil organic matter in forest soils (Bird and Torn, 2006;Brant et al., 2006b;Swanston et al., 2005).”
    Quote in the paperNot a substantial claim0 of 3 sources checked
    • cites Bird and Torn, 2006

      Not checked in the free run.

    • cites Brant et al., 2006b

      Not checked in the free run.

    • cites Swanston et al., 2005

      Not checked in the free run.

  • May combine two claims.

    Premisecitation

    Recent studies using differential isotope labeling suggest that downward transport of litter C is not a major source of C in soil A horizon microbial biomarkers, heterotrophically respired CO2-C, or soil organic matter C sources.

    “Recent studies taking advantage of differential isotope labeling of these sources in forest soils suggest that downward transport of litter C is not a major source of C in soil A horizon microbial biomarkers (Bird et al., 2008;Brant et al., 2006a,b), heterotrophically respired CO 2 -C (Cisneros Dozal et al., 2006), or soil organic matter C sources (Fröberg et al., 2007;Hanson et al., 2005;Swanston”
    Quote in the paperSubstantial claim0 of 3 sources checked
    • cites Bird et al., 2008

      Not checked in the free run.

    • cites Brant et al., 2006a,b

      Not checked in the free run.

    • cites Cisneros Dozal et al., 2006

      Not checked in the free run.

  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Interpretationreasoning

    It is possible that the EBIS plot PLFA results underestimate the overall contribution from leaf litter C because there was no difference in 14C for leaf litter that is <1 year old or >4 years old, and this could be diluting the difference between plots.

    “It is thus possible that the EBIS plot PLFA results underestimate the overall contribution from leaf litter C because there was no difference in 14 C for leaf litter that is <1 year old or >4 years old, and this could be diluting the difference between plots.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing). The quote only partly states this claim.

    Study design and conductown data

    Samples with very low-14C values that showed clear excess CO2 yield on combustion were excluded from the data set.

    “These samples (normally very small ones, e.g.<30 mg C) always had very low-14 C values and have been excluded from the data set.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.

    Study design and conductown data

    The authors have chosen to report data with large analytical errors; duplicate and replicate analyses indicate that these large errors are appropriate.

    “We have thus chosen to report data with large analytical errors; duplicate and replicate analyses indicate that these large errors are appropriate (Table 1).”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductown data

    Due to very large errors calculated for samples under 10 micrograms C in size (up to ±120‰), those samples were excluded from subsequent analyses.

    “Due to the very large errors calculated for samples under 10 micrograms C in size (up to Æ120&), we have excluded them from subsequent analyses.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    While 14C signatures of PLFA were between those of bulk organic matter from the Oa and A horizons, the lack of a difference in PLFA-14C between high- and low-14C treatments in the litter addition experiment limits contribution from the Oa horizon to be <33% of microbial C.

    “While 14 C signatures of PLFA were between those of bulk organic matter from the Oa and A horizons, the lack of a difference in PLFA-14 C between high-and low-14 C treatments in our litter addition experiment limits contribution form the Oa horizon to be <33% of microbial C.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationreasoning

    F may underestimate overall leaf litter contribution because there was no difference in 14C in litter that fell in the fall of 2004, prior to sample collection, or in the years prior to the litter manipulation experiment.

    “F may underestimate overall leaf litter contribution because there was no difference in 14 C in for litter that fell in the fall of 2004, prior to our sample collection, or in the years prior to our litter manipulation experiment.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    While the authors cannot completely rule out the possibility that the EBIS plot results underestimate the contribution of C from leaf litter that fell before (>4 years) or after (<1 years) the experimental period, three additional lines of evidence make a major contribution from such a source unlikely.

    “While we cannot completely rule out the possibility that our EBIS plot results underestimate the contribution of C from leaf litter that fell before (>4 years) or after (<1 years) the experimental period, three additional lines of evidence make a major contribution from such a source unlikely.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    Given that root inputs were excluded in the mesocosm experiment, the decline in C content in the A horizon, and in radiocarbon signature of PLFA, tend to corroborate the idea that roots, rather than Oa horizon carbon, are the major source of C for microbes.

    “Given that root inputs were excluded in the mesocosm experiment, the decline in C content in the A horizon, and in radiocarbon signature of PLFA, tend to corroborate the idea that roots, rather than Oa horizon carbon, are the major source of C for microbes.”
    Quote in the paperSubstantial claim
  • The quote only partly states this claim.

    Study design and conductnone given

    Analytical uncertainties associated with PLFA measurements limit interpretations of which microbial groups incorporated more surface litter C.

    “However, analytical uncertainties associated with PLFA measurements limit these interpretations.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Premisecitation

    While the Δ14C of leaf litter in 2000 was 245-260‰ at Walker Branch and 109-195‰ at Haw Ridge, the Δ14C of leaf litter that fell in prior years was much lower, closer to 100‰.

    “While the D 14 C of leaf litter in 2000 was 245e260& at Walker Branch and 109e195& at Haw Ridge (leaf litter in this part of the ORR was the source for the low-14 C litter addition), the D 14 C of leaf litter that fell in prior years was much lower, closer to 100& (Hanson et al., 2005).”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Hanson et al., 2005

      Not checked in the free run.

  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    The authors experienced trouble in developing the PLFA analysis with the incomplete evaporation of solvents used to transfer the purified compounds.

    “We experienced some trouble in developing our PLFA analysis with the incomplete evaporation of solvents used to transfer the purified compounds.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    The lack of a strong signal from recent leaf litter in microbial respiration (in years when <1 year old leaf litter had very different 14C signatures), and the lack of a litter-derived 14C signature in the mesocosms in the 8 months following litter addition, indicate that a major contribution from <1 year litter is unlikely.

    “The lack of a strong signal from recent leaf litter in microbial respiration (in years when <1 year old leaf litter had very different 14 C signatures), and the lack of a litter-derived 14 C signature in the mesocosms in the 8 months following litter addition, indicate that a major contribution from <1 year litter is unlikely.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    Single compound radiocarbon measurements, particularly of very small (<30 mg C) samples, have large associated uncertainties because of contamination of the sample when processed by the PCGC.

    “Single compound radiocarbon measurements, particularly of very small (<30 mg C) samples, have large associated uncertainties because of contamination of the sample when processed by the PCGC.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductreasoning

    Samples that when combusted yielded more C than expected based on PLFA peak areas and number of injections were excluded as likely contaminated with residual solvent.

    “We also excluded samples which when combusted yielded more C than expected based on PLFA peak areas and the number of injections as likely contaminated with residual solvent (see Discussion).”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    The lack of difference in PLFA between plots cannot be exclusively due to incorporation of <1 year leaf litter carbon; if current year leaf litter were a major source of PLFA-C, another source of PLFA-C with much higher 14C signatures than measured in the other soil components would be needed.

    “Hence the lack of difference in PLFA between plots cannot be exclusively due to incorporation of <1 year leaf litter carbon; indeed if current year leaf litter were a major source of PLFA-C, we would need to find another source of PLFA-C that had much higher 14 C signatures than we measure in the other soil components (see Fig. 1).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    While DOC carbon is sequestered in the mesocosm A horizons during this time period, it is not primarily derived from recent leaf litter given the decline or lack of change in 14C in microbial biomarkers.

    “While DOC carbon is sequestered in the mesocosm A horizons during this time period (Fröberg et al., 2009), it is not primarily derived from recent leaf litter given the decline or lack of change in 14 C in microbial biomarkers.”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Fröberg et al., 2009

      Not checked in the free run.

  • May combine two claims.

    Interpretationcitation

    In both treatment plots, the 14C signature of fine roots reported by Joslin et al. (2006) is closest to the 14C signatures recorded in the PLFA compounds, suggesting that roots are the major source of C in the mineral soil microbial community.

    “In both treatment plots, the 14 C signature of fine roots reported by Joslin et al. (2006) is closest to the 14 C signatures recorded in the PLFA compounds, suggesting that roots are the major source of C in the mineral soil microbial community (Fig. 3).”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Joslin et al. (2006)

      Not checked in the free run.

  • May combine two claims.

    Premisecitation

    Carbon contents in the mesocosm A horizons declined during the experiment, though there was no measurable change in the radiocarbon signature of bulk A horizon organic matter.

    “Carbon contents in the mesocosm A horizons declined during the experiment (Fröberg et al., 2009), though there was no measurable change in the radiocarbon signature of bulk A horizon organic matter.”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Fröberg et al., 2009

      Not checked in the free run.

  • May combine two claims.

    Premiseown data

    The radiocarbon content of DOC draining litter and organic layers and entering the A horizon was 406‰ in April and 531‰ in November.

    “The radiocarbon content of DOC draining litter and organic layers and entering the A horizon was 406& in April (after labeled litter addition and following our March sampling) and 531& in November (our second sampling; Fig. 3).”
    Quote in the paperSubstantial claim0 of 1 sources checked
    • cites Fröberg et al., 2009

      Not checked in the free run.

55 of 55
  • The authors state this as an assumption.

    All other possible contributors to microbial C have identical 14C signatures between the experimental plots; any observed difference in 14C between high-14C and low-14C litter treatments is due to incorporation of litter carbon into PLFA or microbially respired CO2.

    “We assume that all other possible contributors to microbial C have identical 14 C signatures between the experimental plots; that is, any observed difference in 14 C between high-14 C and low-14 C litter treatments is due to incorporation of litter carbon into PLFA or microbially respired CO 2 .”
  • The authors state this as an assumption.

    Additional 14C-free C was added by the PCGC column separation and trapping procedures.

    “Correction of the known FAME standards assumed that additional 14 C-free C was added by the PCGC column separation and trapping procedures.”
  • The authors state this as an assumption.

    PLFAs represent active microbial biomass carbon sources because phospholipids degrade quickly after microbial cell death.

    “After microbial cell death the phospholipids degrade quickly in soil and thus the PLFAs are assumed to represent active microbial biomass carbon sources.”
  • The paper relies on this without support.

    PLFA biomarkers can be used to distinguish among general types of microbes.

    “PLFA biomarkers may be used to distinguish among general types of microbes.”
  • The paper relies on this without support.

    Saturated PLFA, especially branched compounds, are generally associated with Gram-positive bacteria, while monounsaturated and cyclopropyl-substituted PLFA are associated with Gram-negative bacteria.

    “Saturated PLFA, especially branched compounds, are generally associated with Gram-positive bacteria, while monounsaturated and cyclopropyl-substituted PLFA are associated with Gram-negative bacteria.”
  • The paper relies on this without support.

    The PLFA 18:2ω6 is characteristic for fungi.

    “The PLFA 18:2 u6 is characteristic for fungi.”
6 of 6

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • After proper background subtractions, replicate and duplicate samples with >0.010 mg C are in good agreement.

    “The final results, after proper background subtractions as described above, showed that our replicate and duplicate samples with &gt;0.010 mg C are in good agreement (Kramer et al. 2010).”

    From Blank Assessment for Ultra-Small Radiocarbon Samples: Chemical Extraction and Separation Versus AMS (2010) · cites this paper as Kramer et al. 2010

    Section 3.1 describes background corrections and reports that replicate and duplicate analyses generally agreed within two standard deviations. It also identifies one exception, WB3; 18cy; Table 1 shows both samples in that pair exceeded 0.010 mg C. The unqualified claim of good agreement for samples above that threshold therefore overstates the result. (LLM, conf=0.88)

    Experimental — accuracy not yet measured
  • The MC correction of 0.090 g C is too small to affect the conclusions already obtained for the PLFAs in 14C-elevated soils.

    “As expected, this correction is too small to affect the conclusions already obtained for the PLFAs in 14 C-elevated soils (Kramer et al. 2010).”
  • Soil carbon storage is linked to root inputs including root exudation, which is known to change the activity and composition of the microbial community.

    “Second, soil carbon storage is linked to root inputs 31,32 including root exudation, which is known to change the activity and composition of the microbial community 33 .”
  • Fine root carbon is a measure of carbon input and basal respiration is a measure of microbial metabolic activity, and both were included as variables potentially mediating plant community effects.

    “As variables potentially mediating plant community effects we included fine root carbon as measure of carbon input 31,32 and basal respiration as measure of microbial metabolic activity 20,34,37 .”

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

Each contradiction between two passages listed here was confirmed by an independent check.

  • Opposite descriptions of which mesocosm PLFA declined most

    Minor

    The results say Gram-negative PLFA declined less over eight months, whereas the discussion says the decline tended to be largest for compounds typical of Gram-negative bacteria.

  • Walker Branch and TVA locations are reversed in Fig. 2 caption

    Minor

    The methods identify Walker Branch as the eastern site and TVA as the western site, but the Fig. 2 caption assigns them the opposite locations.

  • Haw Ridge 2000 litter radiocarbon range changes

    Minor

    The paper gives the 2000 Haw Ridge litter range as 190-195& in the methods, but later gives its lower endpoint as 109&.

  • Mesocosm 18:2 mean differs between Tables 1 and 3

    Minor

    Table 3 marks the March 18:2 value as an average of multiple analyses and refers to Table 1, but reports 121.6 where Table 1 reports 121.1.

4 of 4

The citation lists haven’t been fetched yet

References 35 · Cited by 138

Authors
Kramer, C., Trumbore, S., Fröberg, M., Cisneros Dozal, L. M., Zhang, D., Xu, X., Santos, G. M., & Hanson, P. J.
Affiliations
  • University of California, Irvine (US)
  • Max Planck Society (DE)
  • Oak Ridge National Laboratory (US)
Corresponding author
Trumbore, Susan
Venue
Soil Biology and Biochemistry
Publisher
Elsevier BV
Published
2010-07
Volume
42
Issue
7
Pages
1028-1037
ISSN
0038-0717 (ISSN-L)
OpenAlex
W1982839449
Cited by
138
References
35
Citations by year
2026: 1 · 2025: 8 · 2024: 7 · 2023: 7 · 2022: 14 · 2021: 23 · 2020: 7 · 2019: 8 · 2018: 2 · 2017: 10 · 2016: 9 · 2015: 9 · 2014: 7 · 2013: 8 · 2012: 7
FWCI
13.78
Type
journal article
Language
en
Open access
Locations
  • Soil Biology and Biochemistry (publishedVersion)
  • eScholarship (California Digital Library) (submittedVersion, cc-by)
  • Max Planck Institute for Plasma Physics (submittedVersion)
  • ENLIGHTEN (Jurnal Bimbingan dan Konseling Islam) (submittedVersion)
  • eScholarship (California Digital Library) (submittedVersion)
  • MPG.PuRe (Max Planck Society) (submittedVersion)
Funders
  • U.S. Department of Energy (AC05-00OR22725, DE--AC05--00OR22725, DE-AC05?, 00OR22725)
  • Battelle (DE-AC05- 00OR22725, DE-AC05)
  • UT-Battelle (DE-AC05, DEAC05-00OR22725, AC05-00OR22725)
  • Office of Science (DEAC05- 00OR22725, AC05-00OR22725)
  • University of California, Irvine
  • Biological and Environmental Research (00OR22725, DE‐AC05–00OR22725)
  • Oak Ridge National Laboratory (AC05-00OR22725, DE-AC05-00OR22725)
Topics
  • Life Sciences › Agricultural and Biological Sciences › Soil Science › Soil Carbon and Nitrogen Dynamics
  • Physical Sciences › Environmental Science › Ecology › Microbial Community Ecology and Physiology
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Mycorrhizal Fungi and Plant Interactions
Keywords
leaf litter, microbial carbon, carbon-14, microbial phospholipid fatty acids, mineral soils, root-derived carbon, soil organic matter, litterfall, carbon source partitioning, temperate deciduous forest, microbial respiration, carbon leaching

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