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Protein Disorder Prediction

Open access
Linding, Rune, Jensen, Lars Juhl, Diella, Francesca, Bork, Peer, Gibson, Toby J, Russell, Robert B·2003·Structure

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Crossref · 10.1016/j.str.2003.10.002

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Citations

Cites

Research works printed but not linked: 37

  1. Ackerman, 2002, Robustness of the long-range structure in denatured staphylococcal nuclease to changes in amino acid sequence, Biochemistry, 41, 13791, 10.1021/bi020511t · DOI
  2. Andersen, 2002, Continuum secondary structure captures protein flexibility, Structure, 10, 175, 10.1016/S0969-2126(02)00700-1 · DOI
  3. Aviles, 1978, The conformation of histone H5. Isolation and characterisation of the globular segment, Eur. J. Biochem., 88, 363, 10.1111/j.1432-1033.1978.tb12457.x · DOI
  4. Bates, 2003, Huntingtin aggregation and toxicity in Huntington's disease, Lancet, 361, 1642, 10.1016/S0140-6736(03)13304-1 · DOI · Paper page
  5. Battiste, 2000, The eIF1A solution structure reveals a large RNA-binding surface important for scanning function, Mol. Cell, 5, 109, 10.1016/S1097-2765(00)80407-4 · DOI
  6. Brenner, 2000, Target selection for structural genomics, Nat. Struct. Biol. Sppl., 7, 967, 10.1038/80747 · DOI
  7. Brooks, 1985, Normal modes for specific motions of macromolecules, Proc. Natl. Acad. Sci. USA, 82, 4995, 10.1073/pnas.82.15.4995 · DOI · Paper page
  8. Dedmon, 2002, FlgM gains structure in living cells, Proc. Natl. Acad. Sci. USA, 99, 12681, 10.1073/pnas.202331299 · DOI · Paper page
  9. Demarest, 2002, Mutual synergistic folding in recruitment of CBP/p300 by p160 nuclear receptor coactivators, Nature, 415, 549, 10.1038/415549a · DOI · Paper page
  10. Dunker, 2001, Intrinsically disordered protein, J. Mol. Graph. Model., 19, 26, 10.1016/S1093-3263(00)00138-8 · DOI · Paper page
  11. Evans, 2002, Endocytosis and vesicle trafficking, Curr. Opin. Struct. Biol., 12, 814, 10.1016/S0959-440X(02)00395-0 · DOI
  12. Garner, 1998, Predicting disordered regions from amino acid sequence. Common themes despite differing structural characterization, Genome Inform. Ser. Workshop Genome Inform., 9, 201
  13. Garner, 1999, Predicting binding regions within disordered proteins, Genome Inform. Ser. Workshop Genome Inform., 10, 41
  14. Gunasekaran, 2003, Extended disordered proteins, Trends Biochem. Sci., 28, 81, 10.1016/S0968-0004(03)00003-3 · DOI · Paper page
  15. Hegger, R., Kantz, H., and Schreiber, T. (1999). Practical implementation of nonlinear time series methods: The tisean package. CHAOS 9. · DOI · Paper page
  16. Jensen, 2002, Prediction of human protein function from post-translational modifications and localization features, J. Mol. Biol., 319, 1257, 10.1016/S0022-2836(02)00379-0 · DOI · Paper page
  17. Kaplan, 2003, alpha-Synuclein, J. Mol. Neurosci., 20, 83, 10.1385/JMN:20:2:83 · DOI
  18. Klein-Seetharaman, 2002, Long-range interactions within a nonnative protein, Science, 295, 1719, 10.1126/science.1067680 · DOI · Paper page
  19. Li, 2000, Comparing predictors of disordered protein, Genome Inform. Ser. Workshop Genome Inform., 11, 172
  20. Linding, 2003, GlobPlot, Nucleic Acids Res., 31, 3701, 10.1093/nar/gkg519 · DOI · Paper page
  21. Liu, 2002, Loopy proteins appear conserved in evolution, J. Mol. Biol., 322, 53, 10.1016/S0022-2836(02)00736-2 · DOI
  22. Plaxco, 2001, Unfolded, yes, but random?, Never! Nat. Struct. Biol., 8, 659, 10.1038/90349 · DOI
  23. Press, W., Teukolsky, S., Vetterling, W., and Flannery, B. (2002). Numerical Recipes in C++ The Art of Scientific Computing. Cambridge University Press, second edition.
  24. Promponas, 2000, Cast, Bioinformatics, 16, 915, 10.1093/bioinformatics/16.10.915 · DOI
  25. Puntervoll, 2003, ELM server, Nucleic Acids Res., 31, 3625, 10.1093/nar/gkg545 · DOI · Paper page
  26. Romero, 1997, Identifying disordered proteins from amino acid sequences, Proc. IEEE Int. Conf. Neural Networks, 1, 90
  27. Saqi, 1994, Identification of sequence motifs from a set of proteins with related function, Protein Eng., 7, 165, 10.1093/protein/7.2.165 · DOI
  28. Schweers, 1994, Structural studies of tau protein and Alzheimer paired helical filaments show no evidence for beta-structure, J. Biol. Chem., 269, 24290, 10.1016/S0021-9258(19)51080-8 · DOI · Paper page
  29. Shortle, 2001, Persistence of native-like topology in a denatured protein in 8 M urea, Science, 293, 487, 10.1126/science.1060438 · DOI · Paper page
  30. Smyth, 2001, Solution structure of native proteins with irregular folds from Raman optical activity, Biopolymers, 58, 138, 10.1002/1097-0282(200102)58:2<138::AID-BIP30>3.0.CO;2-W · DOI
  31. Tompa, 2002, Intrinsically unstructured proteins, Trends Biochem. Sci., 27, 527, 10.1016/S0968-0004(02)02169-2 · DOI · Paper page
  32. Uversky, 2002, Natively unfolded proteins, Protein Sci., 11, 739, 10.1110/ps.4210102 · DOI · Paper page
  33. Verkhivker, 2003, Simulating disorder-order transitions in molecular recognition of unstructured proteins, Proc. Natl. Acad. Sci. USA, 100, 5148, 10.1073/pnas.0531373100 · DOI
  34. Vihinen, 1994, Accuracy of protein flexibility predictions, Proteins, 19, 141, 10.1002/prot.340190207 · DOI · Paper page
  35. Wootton, 1994, Non-globular domains in protein sequences, Comput. Chem., 18, 269, 10.1016/0097-8485(94)85023-2 · DOI · Paper page
  36. Wright, 1999, Intrinsically unstructured proteins, J. Mol. Biol., 293, 321, 10.1006/jmbi.1999.3110 · DOI · Paper page
  37. Zoete, 2002, Relation between sequence and structure of HIV-1 protease inhibitor complexes, J. Mol. Biol., 315, 21, 10.1006/jmbi.2001.5173 · DOI

Cited by

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Metadata

Authors
Linding, R., Jensen, L. J., Diella, F., Bork, P., Gibson, T. J., & Russell, R. B.
Venue
Structure
Publisher
Elsevier BV
Published
2003-11
Volume
11
Issue
11
Pages
1453-1459
ISSN
0969-2126 (ISSN-L)
OpenAlex
W2014776147
Cited by
1,212
References
5
FWCI
13.19
Type
journal article
Language
en
Open access
bronze
Funders
  • European Commission (QLRI-CT-2000-00127)
  • Bundesministerium für Bildung und Frauen (BMBF-01-GG-9817)

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Data sources

Bibliographic data: Semantic Scholar, OpenAlex, Crossref.

Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.