Cited by 72Plant Diversity and EvolutionEvolution and Paleontology StudiesPlant Ecology and Taxonomy Studies

Livistona palms in Australia: ancient relics or opportunistic immigrants?

Open access
Crisp, Michael D., Isagi, Yuji, Kato, Yohei, Cook, Lyn G., Bowman, David M.J.S.·2010·Molecular Phylogenetics and Evolution

Abstract

Eighteen of the 34 species of the fan palm genus Livistona (Arecaceae) are restricted to Australia and southern New Guinea, east of Wallace's Line, an ancient biogeographic boundary between the former supercontinents Laurasia and Gondwana. The remaining species extend from SE Asia to Africa, west of Wallace's Line. Competing hypotheses contend that Livistona is (a) ancient, its current distribution a relict of the supercontinents, or (b) a Miocene immigrant from the north into Australia as it drifted towards Asia. We have tested these hypotheses using Bayesian and penalized likelihood molecular dating based on 4Kb of nuclear and chloroplast DNA sequences with multiple fossil calibration points. Ancestral areas and biomes were reconstructed using parsimony and maximum likelihood. We found strong support for the second hypothesis, that a single Livistona ancestor colonized Australia from the north about 10-17Ma. Spread and diversification of the genus within Australia was likely favoured by a transition from the aseasonal wet to monsoonal biome, to which it could have been preadapted by fire-tolerance.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1016/j.ympev.2009.09.020

Cites

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

No citation lists for this paper

No citation lists for this paper yet — checked again daily.

References 84 · Cited by 72

Research works printed but not linked: 65

  1. Alexandre, 2004, Methodological improvements for investigating silcrete formation: petrography, FT-IR and oxygen isotope ratio of silcrete quartz cement, Lake Eyre Basin (Australia), Chem. Geol., 211, 261, 10.1016/j.chemgeo.2004.06.024 · DOI
  2. Alley, 1998, Cainozoic stratigraphy, palaeoenvironments and geological evolution of the Lake Eyre Basin, Palaeogeogr. Palaeocl., 144, 239, 10.1016/S0031-0182(98)00120-5 · DOI
  3. Asmussen, 2006, A new subfamily classification of the palm family (Arecaceae): evidence from plastid DNA phylogeny, Bot. J. Linn. Soc., 151, 15, 10.1111/j.1095-8339.2006.00521.x · DOI
  4. Berry, 1905, A palm from the mid-Cretaceous, Torreya, 5, 30
  5. Bowman, 2002, The Australian summer monsoon: a biogeographic perspective, Aust. Geogr. Stud., 40, 261, 10.1111/1467-8470.00179 · DOI
  6. Bowman, 2009, Fire in the Earth system, Science, 324, 481, 10.1126/science.1163886 · DOI · Paper page
  7. Bowman, D.M.J.S., Braby, M.F., Brown, G.K., Brown, J., Cook, L.G., Crisp, M.D., Ford, F., Haberle, S.G., Hughes, J., Isagi, Y., Joseph, L., Ladiges, P.Y., McBride, J., Nelson, G., 2009b. Biogeography of the Australian monsoon tropics. J. Biogeogr., 2009b. · DOI
  8. Bowman, 1995, Munmarlary revisited: Response of a north Australian Eucalyptus tetrodonta savanna protected from fire for 20 years, Aust. Ecol., 20, 526, 10.1111/j.1442-9993.1995.tb00571.x · DOI
  9. Box, 2008, Central Australian waterbodies: The importance of permanence in a desert landscape, J. Arid Environ., 72, 1395, 10.1016/j.jaridenv.2008.02.022 · DOI
  10. Byrne, 2008, Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota, Mol. Ecol., 17, 4398, 10.1111/j.1365-294X.2008.03899.x · DOI
  11. Chivas, 2001, Sea-level and environmental changes since the last interglacial in the Gulf of Carpentaria, Australia: an overview, Quatern. Int., 83–85, 19, 10.1016/S1040-6182(01)00029-5 · DOI
  12. Christin, 2008, Oligocene CO2 decline promoted C-4 photosynthesis in grasses, Curr. Biol., 18, 37, 10.1016/j.cub.2007.11.058 · DOI
  13. Clement, 2000, TCS: a computer program to estimate gene genealogies, Mol. Ecol., 9, 1657, 10.1046/j.1365-294x.2000.01020.x · DOI
  14. Conran, 2003, Palmoxylon queenslandicum: a permineralised Oligocene palm trunk from near Springsure, southeastern Queensland, Alcheringa, 27, 125, 10.1080/03115510308619553 · DOI
  15. Cook, 2005, Directional asymmetry of long-distance dispersal and colonisation could mislead reconstructions of biogeography, J. Biogeogr., 32, 741, 10.1111/j.1365-2699.2005.01261.x · DOI
  16. Cook, 2005, Not so ancient: the extant crown group of Nothofagus represents a post-Gondwanan radiation, Proc. R. Soc. B. Biol. Sci., 272, 2535, 10.1098/rspb.2005.3219 · DOI
  17. Cook, 2008, Reticulate evolution in the natural range of the invasive wetland tree species Melaleuca quinquenervia, Mol. Phylogenet. Evol., 47, 506, 10.1016/j.ympev.2008.02.012 · DOI
  18. Crisp, 2009, Phylogenetic biome conservatism on a global scale, Nature, 458, 754, 10.1038/nature07764 · DOI
  19. Crisp, 2007, A congruent molecular signature of vicariance across multiple plant lineages, Mol. Phylogenet. Evol., 43, 1106, 10.1016/j.ympev.2007.02.030 · DOI
  20. Crisp, 2009, Explosive radiation or mass extinction? Interpreting signatures in molecular phylogenies, Evolution, 63, 2257, 10.1111/j.1558-5646.2009.00728.x · DOI
  21. Crisp, 2004, Radiation of the Australian flora: what can comparisons of molecular phylogenies across multiple taxa tell us about the evolution of diversity in present-day communities? Philos, Trans. R. Soc. B, 359, 1551, 10.1098/rstb.2004.1528 · DOI
  22. Dowe, 1995, A preliminary review of the biogeography of Australian palms, Mooreana, 5, 7
  23. Dowe, 2009, A taxonomic account of Livistona R.Br. (Arecaceae), Gard. Bull. Singapore, 60, 185
  24. Franklin, 2007, Niche differentiation and regeneration in the seasonally flooded Melaleuca forests of northern Australia, J. Trop. Ecol., 23, 457, 10.1017/S0266467407004130 · DOI
  25. Greenwood, 1996, Eocene monsoon forests in central Australia?, Aust. Syst. Bot., 9, 95, 10.1071/SB9960095 · DOI
  26. Guerin, 2006, Plant macrofossil evidence for the environment associated with the Riversleigh fauna, Aust. J. Bot., 54, 717, 10.1071/BT04220 · DOI
  27. Hall, 2002, Cenozoic geological and plate tectonic evolution of SE Asia and the SW Pacific: computer-based reconstructions, model and animations, J. Asian Earth Sci., 20, 353, 10.1016/S1367-9120(01)00069-4 · DOI
  28. Harley, 2006, A summary of fossil records for Arecaceae, Bot. J. Linn. Soc., 151, 39, 10.1111/j.1095-8339.2006.00522.x · DOI
  29. Hnatiuk, 1977, Population structure of Livistona eastonii Gardn., Mitchell Plateau, Western Australia, Aust. Ecol., 2, 461, 10.1111/j.1442-9993.1977.tb01161.x · DOI
  30. Kass, 1995, Bayes factors, J. Am. Stat. Assoc., 90, 773, 10.1080/01621459.1995.10476572 · DOI · Paper page
  31. Keeley, 2005, Fire and the Miocene expansion of C-4 grasslands, Ecol. Lett., 8, 683, 10.1111/j.1461-0248.2005.00767.x · DOI · Paper page
  32. Latz, 1975, Notes on the relict palm Livistona mariae F. Muell. in central Australia, Trans. R. Soc. South Aust., 99, 189
  33. Lee, 2001, Uninformative characters and apparent conflict between molecules and morphology, Mol. Biol. Evol., 18, 676, 10.1093/oxfordjournals.molbev.a003848 · DOI
  34. Lewis, 2001, Phylogenetic utility of the nuclear gene malate synthase in the palm family (Arecaceae), Mol. Phylogenet. Evol., 19, 409, 10.1006/mpev.2001.0932 · DOI
  35. Lewis, 2001, A likelihood approach to estimating phylogeny from discrete morphological character data, Syst. Biol., 50, 913, 10.1080/106351501753462876 · DOI · Paper page
  36. Macphail, 1997, Late Neogene climates in Australia: Fossil pollen- and spore-based estimates in retrospect and prospect, Aust. J. Bot., 45, 425, 10.1071/BT96052 · DOI
  37. Macphail, 2004, Age and palaeoenvironmental constraints on the genesis of the Yandi channel iron deposits, Marillana Formation, Pilbara, northwestern Australia, Aust. J. Earth Sci., 51, 497, 10.1111/j.1400-0952.2004.01071.x · DOI
  38. Maddison, 1997, Gene trees in species trees, Syst. Biol., 46, 523, 10.1093/sysbio/46.3.523 · DOI
  39. Martin, 2006, Cenozoic climatic change and the development of the arid vegetation in Australia, J. Arid Environ., 66, 533, 10.1016/j.jaridenv.2006.01.009 · DOI
  40. McLoughlin, 2001, The breakup history of Gondwana and its impact on pre-Cenozoic floristic provincialism, Aust. J. Bot., 49, 271, 10.1071/BT00023 · DOI
  41. Ohtani, M., Tani, N., Yoshimaru, H., 2008. Isolation of polymorphic microsatellite loci in Livistona chinensis (Jacq.) R. Br. ex Mart. var. boninensis Becc., an endemic palm species of the oceanic Bonin Islands, Japan. Conserv. Genet., doi: 10.1007/s10592-008-9671-5. · DOI
  42. Orscheg, 1996, Ecology of Livistona australis (R.Br.) Martius at its southern limit, south-eastern Australia: Part I. Distribution and genetic variation, Mooreana, 6, 8
  43. Orscheg, 1996, Ecology of Livistona australis (R.Br.) Martius at its southern limit, south-eastern Australia: Part II. Phenology, germination, herbivory, regeration and fire effects, Mooreana, 6, 36
  44. Osborne, 2008, Atmosphere, ecology and evolution: what drove the Miocene expansion of C-4 grasslands?, J. Ecol., 96, 35, 10.1111/j.1365-2745.2007.01323.x · DOI
  45. Pagel, 1999, The maximum likelihood approach to reconstructing ancestral character states of discrete characters on phylogenies, Syst. Biol., 48, 612, 10.1080/106351599260184 · DOI
  46. Poinar, 2002, Fossil palm flowers in Dominican and Baltic amber, Bot. J. Linn. Soc., 139, 361, 10.1046/j.1095-8339.2002.00052.x · DOI
  47. Poinar, 2002, Fossil palm flowers in Dominican and Mexican amber, Bot. J. Linn. Soc., 138, 57, 10.1046/j.1095-8339.2002.00010.x · DOI
  48. Pole, 1996, Tertiary plant fossils from Australia’s ‘Top End’, Aust. Syst. Bot., 9, 113, 10.1071/SB9960113 · DOI
  49. Poux, 2005, Asynchronous colonization of Madagascar by the four endemic clades of primates, tenrecs, carnivores, and rodents as inferred from nuclear genes, Syst. Biol., 54, 719, 10.1080/10635150500234534 · DOI
  50. Price, 1999, A.N. Rodd’s revision of Livistona in Australia, Palms Cycads, 64–65, 2
  51. Rodd, 1998, Revision of Livistona (Arecaceae) in Australia, Telopea, 8, 49, 10.7751/telopea19982015 · DOI
  52. Ronquist, 2003, MrBayes 3: Bayesian phylogenetic inference under mixed models, Bioinformatics, 19, 1572, 10.1093/bioinformatics/btg180 · DOI
  53. Sanderson, 2003, R8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock, Bioinformatics, 19, 301, 10.1093/bioinformatics/19.2.301 · DOI · Paper page
  54. Scherson, 2008, Phylogeny, biogeography, and rates of diversification of New World Astragalus (Leguminosae) with an emphasis on South American radiations, Am. J. Bot., 95, 1030, 10.3732/ajb.0800017 · DOI
  55. Schwarz, 2006, Molecular phylogenetics of the exoneurine allodapine bees reveal an ancient and puzzling dispersal from Africa to Australia, Syst. Biol., 55, 31, 10.1080/10635150500431148 · DOI
  56. Scotese, 2004, A continental drift flipbook, J. Geol., 112, 729, 10.1086/424867 · DOI
  57. Shimizu, 2003, The nature of Ogasawara and its conservation, Global Environ. Res., 7, 3
  58. Stamatakis, 2008, A rapid bootstrap algorithm for the RAxML web servers, Syst. Biol., 57, 758, 10.1080/10635150802429642 · DOI · Paper page
  59. Unmack, 2001, Biogeography of Australian freshwater fishes, J. Biogeogr., 28, 1053, 10.1046/j.1365-2699.2001.00615.x · DOI
  60. Unmack, 2001, Fish persistence and fluvial geomorphology in central Australia, J. Arid Environ., 49, 653, 10.1006/jare.2001.0813 · DOI
  61. Whitmore, 1982, Wallace’s Line: a result of plate tectonics, Ann. Mo. Bot. Gard., 69, 668, 10.2307/2399087 · DOI
  62. Wischusen, 2004, Hydrogeology of palm valley, central Australia; a Pleistocene flora refuge?, J. Hydrol., 293, 20, 10.1016/j.jhydrol.2004.01.007 · DOI · Paper page
  63. Wuschke, 1999, Fire resistance in a Queensland Livistona, Palms, 43, 140
  64. Yates, 2008, Big fires and their ecological impacts in Australian savannas: size and frequency matters, Int. J. Wildland Fire, 17, 768, 10.1071/WF07150 · DOI
  65. Zachos, 2001, Trends, rhythms, and aberrations in global climate 65Ma to present, Science, 292, 686, 10.1126/science.1059412 · DOI · Paper page

Authors
Crisp, M. D., Isagi, Y., Kato, Y., Cook, L. G., & Bowman, D. M. J. S.
Affiliations
  • Australian National University (AU)
  • Kyoto University (JP)
  • The University of Queensland (AU)
  • University of Tasmania (AU)
Corresponding author
Crisp, Michael D.
Venue
Molecular Phylogenetics and Evolution
Publisher
Elsevier BV
Published
2010-02
Volume
54
Issue
2
Pages
512-523
ISSN
1055-7903 (ISSN-L)
OpenAlex
W2135983898
Cited by
72
References
84
Citations by year
2026: 2 · 2025: 2 · 2024: 4 · 2023: 1 · 2022: 3 · 2020: 4 · 2019: 2 · 2018: 3 · 2017: 2 · 2016: 2 · 2015: 5 · 2014: 6 · 2013: 4 · 2012: 12
FWCI
11.14
Type
journal article
Language
en
Open access
Locations
  • Molecular Phylogenetics and Evolution (publishedVersion)
  • PubMed (publishedVersion)
  • eCite Digital Repository (University of Tasmania) (submittedVersion)
  • Figshare (submittedVersion, cc-by)
  • ANU Open Research (Australian National University) (submittedVersion)
Funders
  • Australian Research Council (DP0665253)
  • Ministry of Education, Culture, Sports, Science and Technology (14405006)
Topics
  • Life Sciences › Agricultural and Biological Sciences › Ecology, Evolution, Behavior and Systematics › Plant Diversity and Evolution
  • Physical Sciences › Earth and Planetary Sciences › Paleontology › Evolution and Paleontology Studies
  • Life Sciences › Agricultural and Biological Sciences › Ecology, Evolution, Behavior and Systematics › Plant Ecology and Taxonomy Studies
Keywords
Livistona, fan palm, Arecaceae, Australian flora, biogeography, Wallace's Line, Gondwana, Miocene colonization, ancestral area reconstruction, fire tolerance, divergence time estimation
MeSH terms
Australia, Bayes Theorem, Cell Nucleus, Fossils, Geography, Haplotypes, Phylogeny, Likelihood Functions, Sequence Analysis, DNA, Ecosystem, DNA, Chloroplast, DNA, Plant, Evolution, Molecular, Arecaceae

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review