The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.
Repbase Update: a database and an electronic journal of repetitive elements
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“The first database on human repetitive DNA elements, including TRs, was developed in 1992 (117), eventually becoming RepBase (118).”
From Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases (2019) · cites this paper as [118]
In the citing paper
“Despite this diversity, the majority of these databases rely on the results of well-established automated bioinformatic approaches such as the Tandem Repeats Finder (TRF) program (130) or RepeatMasker (118) to characterize repeat content.”
From Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases (2019) · cites this paper as [118]
In the citing paper
“Especially the use of RepeatMasker as the preferred software to identify and mask repeats, (http://www.repeatmasker.org/), has allowed the standardized treatment of raw genomic sequences and reproducibility of protocols for the establishment of these databases.”
From Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases (2019) · cites this paper as [118]
Citations
Cites
Molecular evidence from retroposons that whales form a clade within even-toed ungulates
Shimamura, M., Yasue, H., Ohshima, K., Abe, H., Kato, H., Kishiro, T., Goto, M., Munechika, I., & Okada, N. (1997) · Nature · doi:10.1038/41759 · Cited by 399
Cited by
Sorted by citations
Initial sequencing and analysis of the human genome
International Human Genome Sequencing Consortium, Whitehead Institute for Biomedical Research, C. F. G. R., Lander, E. S., Linton, L. M., Birren, B., Nusbaum, C., Zody, M. C., Baldwin, J., Devon, K., Dewar, K., et al. (2001) · Nature · doi:10.1038/35057062 · Cited by 24,216
The Human Genome Browser at UCSC
Kent, W. J., Sugnet, C. W., Furey, T. S., Roskin, K. M., Pringle, T. H., Zahler, A. M., & Haussler, A. D. (2002) · Genome Research · doi:10.1101/gr.229102 · Cited by 10,400
Tissue-specific mutation accumulation in human adult stem cells during life
Blokzijl, F., de Ligt, J., Jager, M., Sasselli, V., Roerink, S., Sasaki, N., Huch, M., Boymans, S., Kuijk, E., Prins, P., et al. (2016) · Nature · doi:10.1038/nature19768 · Cited by 935
Retrotransposons regulate host genes in mouse oocytes and preimplantation embryos
Peaston, A. E., Evsikov, A. V., Graber, J. H., de Vries, W. N., Holbrook, A. E., Solter, D., & Knowles, B. B. (2004) · Developmental Cell · doi:10.1016/j.devcel.2004.09.004 · Cited by 710
An initial map of insertion and deletion (INDEL) variation in the human genome
Mills, R. E., Luttig, C. T., Larkins, C. E., Beauchamp, A., Tsui, C., Pittard, W. S., & Devine, S. E. (2006) · Genome Research · doi:10.1101/gr.4565806 · Cited by 673
Metadata
- Authors
- Jurka, J.
- Venue
- Trends in Genetics
- Publisher
- Elsevier BV
- Published
- 2000-09-01
- Volume
- 16
- Issue
- 9
- Pages
- 418-420
- ISSN
- 0168-9525
- Cited by
- 883
- References
- 1
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
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How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Repbase Update: a database and an electronic journal of repetitive elements. https://app.cochat.ai/papers/10.1016/s0168-9525(00)02093-x
- The paper
- Jurka, J. (2000). Repbase Update: a database and an electronic journal of repetitive elements. Trends in Genetics. https://doi.org/10.1016/s0168-9525(00)02093-x
