Cited by 817

P1/HC-Pro, a Viral Suppressor of RNA Silencing, Interferes with Arabidopsis Development and miRNA Function

Kasschau, Kristin D., Xie, Zhixin, Allen, Edwards, Llave, Cesar, Chapman, Elisabeth J., Krizan, Kate A., Carrington, James C.·2003·Developmental Cell

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1016/s1534-5807(03)00025-x

Cites

3 of 3 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • In Arabidopsis, suppression of RNA silencing, which shares a common pathway with miRNA processing, results in developmental defects.

    “In Arabidopsis, suppression of RNA silencing, which shares a common pathway with miRNA processing, results in developmental defects (Kasschau et al. 2003).”

    From A microRNA array reveals extensive regulation of microRNAs during brain development (2003) · cites this paper as Kasschau et al. 2003

    The Results and Discussion report that Arabidopsis plants expressing the RNA-silencing suppressor P1/HC-Pro developed severe abnormalities. They also show interference with miRNA-guided activity, but locate it downstream of miRNA processing; the claim’s description of a common pathway with miRNA processing is therefore more specific than the paper establishes. (LLM, conf=0.82)

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 51

  1. [2]2. Ambros, V. microRNAstiny regulators with great potential Cell. 2001; 107:823-826 Full Text Full Text (PDF) Scopus (1521) PubMed Google Scholar
  2. [3]3. Anandalakshmi, R. ∙ Pruss, G.J. ∙ Ge, X. ... A viral suppressor of gene silencing in plants Proc. Natl. Acad. Sci. USA. 1998; 95:13079-13084 Crossref Scopus (728) PubMed Google Scholar
  3. [4]4. Bernstein, E. ∙ Caudy, A.A. ∙ Hammond, S.M. ... Role for a bidentate ribonuclease in the initiation step of RNA interference Nature. 2001; 409:363-366 Crossref Scopus (3958) PubMed Google Scholar
  4. [5]5. Brigneti, G. ∙ Voinnet, O. ∙ Wan-Xiang, L. ... Viral pathogenicity determinants are suppressors of transgene silencing EMBO J. 1998; 17:6739-6746 Crossref Scopus (936) PubMed Google Scholar
  5. [6]6. Cardon, G. ∙ Hohmann, S. ∙ Klein, J. ... Molecular characterization of the Arabidopsis SBP-box genes Gene. 1999; 237:91-104 Crossref Scopus (335) PubMed Google Scholar
  6. [7]7. Carrington, J.C. ∙ Freed, D.D. ∙ Oh, C.-S. Expression of potyviral polyproteins in transgenic plants reveals three proteolytic activities required for complete processing EMBO J. 1990; 9:1347-1353 PubMed Google Scholar
  7. [8]8. Clough, S.J. ∙ Bent, A.F. Floral dipa simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana Plant J. 1998; 16:735-743 Crossref PubMed Google Scholar
  8. [9]9. Dalmay, T. ∙ Hamilton, A. ∙ Rudd, S. ... An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus Cell. 2000; 101:543-553 Full Text Full Text (PDF) Scopus (879) PubMed Google Scholar
  9. [11]11. Elbashir, S.M. ∙ Lendeckel, W. ∙ Tuschl, T. RNA interference is mediated by 21- and 22-nucleotide RNAs Genes Dev. 2001; 15:188-200 Crossref Scopus (2778) PubMed Google Scholar
  10. [12]12. Feinberg, A.P. ∙ Vogelstein, B. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity Anal. Biochem. 1983; 257:8569-8572 Google Scholar
  11. [13]13. Golden, T.A. ∙ Schauer, S.E. ∙ Lang, J.D. ... Short integuments1/suspensor1/carpel factory, a Dicer homolog, is a maternal effect gene required for embryo development in Arabidopsis Plant Physiol. 2002; 130:808-822 Crossref Scopus (141) PubMed Google Scholar
  12. [14]14. Grishok, A. ∙ Pasquinelli, A.E. ∙ Conte, D. ... Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing Cell. 2001; 106:23-34 Full Text Full Text (PDF) Scopus (1578) PubMed Google Scholar
  13. [15]15. Hamilton, A.J. ∙ Baulcombe, D.C. A species of small antisense RNA in posttranscriptional gene silencing in plants Science. 1999; 286:950-952 Crossref Scopus (2422) PubMed Google Scholar
  14. [16]16. Hammond, S.M. ∙ Bernstein, E. ∙ Beach, D. ... An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells Nature. 2000; 404:293-296 Crossref Scopus (2491) PubMed Google Scholar
  15. [17]17. Hannon, G.J. RNA interference Nature. 2002; 418:244-251 Crossref Scopus (3651) PubMed Google Scholar
  16. [18]18. Helariutta, Y. ∙ Fukaki, H. ∙ Wysocka-Diller, J. ... The SHORT-ROOT gene controls radial patterning of the Arabidopsis root through radial signaling Cell. 2000; 101:555-567 Full Text Full Text (PDF) Scopus (880) PubMed Google Scholar
  17. [19]19. Hull, R. Matthews' Plant Virology.Academic Press, San Diego, 2001 Google Scholar
  18. [20]20. Hutvágner, G. ∙ McLachlan, J. ∙ Pasquinelli, A.E. ... A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA Science. 2001; 293:834-838 Crossref Scopus (2258) PubMed Google Scholar
  19. [21]21. Hutvágner, G. ∙ Zamore, P.D. A microRNA in a multiple-turnover RNAi enzyme complex Science. 2002; 297:2056-2059 Crossref Scopus (1700) PubMed Google Scholar
  20. [22]22. Jacobsen, S.E. ∙ Running, M.P. ∙ Meyerowitz, E.M. Disruption of an RNA helicase/RNAse III gene in Arabidopsis causes unregulated cell division in floral meristems Development. 1999; 126:5231-5243 PubMed Google Scholar
  21. [23]23. Johansen, L.K. ∙ Carrington, J.C. Silencing on the spotinduction and suppression of RNA silencing in the Agrobacterium-mediated transient expression system Plant Physiol. 2001; 126:930-938 Crossref Scopus (432) PubMed Google Scholar
  22. [24]24. Jones, J.D. ∙ Shlumukov, L. ∙ Carland, F. ... Effective vectors for transformation, expression of heterologous genes, and assaying transposon excision in transgenic plants Transgenic Res. 1992; 1:285-297 Crossref Scopus (268) PubMed Google Scholar
  23. [25]25. Kasschau, K.D. ∙ Carrington, J.C. A counterdefensive strategy of plant virusessuppression of posttranscriptional gene silencing Cell. 1998; 95:461-470 Full Text Full Text (PDF) Scopus (690) PubMed Google Scholar
  24. [26]26. Kasschau, K.D. ∙ Carrington, J.C. Long-distance movement and replication maintenance functions correlate with silencing suppression activity of potyviral HC-Pro Virology. 2001; 285:71-81 Crossref Scopus (171) PubMed Google Scholar
  25. [27]27. Ketting, R.F. ∙ Fischer, S.E. ∙ Bernstein, E. ... Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans Genes Dev. 2001; 15:2654-2659 Crossref Scopus (1505) PubMed Google Scholar
  26. [28]28. Lang, J.D. ∙ Ray, S. ∙ Ray, A. sin1, a mutation affecting female fertility in Arabidopsis, interacts with mod1, its recessive modifier Genetics. 1994; 137:1101-1110 PubMed Google Scholar
  27. [29]29. Lellis, A.D. ∙ Kasschau, K.D. ∙ Whitham, S.A. ... Loss-of-susceptibility mutants of Arabidopsis thaliana reveal an essential role for eIF(iso)4E during potyvirus infection Curr. Biol. 2002; 12:1046-1051 Full Text Full Text (PDF) Scopus (328) PubMed Google Scholar
  28. [30]30. Liscum, E. ∙ Reed, J.W. Genetics of AUX/IAA and ARF action in plant growth and development Plant Mol. Biol. 2002; 49:387-400 Crossref Scopus (669) PubMed Google Scholar
  29. [31]31. Liu, H. ∙ Reavy, B. ∙ Swanson, M. ... Functional replacement of the tobacco rattle virus cysteine-rich protein by pathogenicity proteins from unrelated plant viruses Virology. 2002; 298:232-239 Crossref Scopus (64) PubMed Google Scholar
  30. [32]32. Llave, C. ∙ Kasschau, K.D. ∙ Rector, M.A. ... Endogenous and silencing-associated small RNAs in plants Plant Cell. 2002; 14:1605-1619 Crossref Scopus (795) PubMed Google Scholar
  31. [33]33. Llave, C. ∙ Xie, Z. ∙ Kasschau, K.D. ... Cleavage of Scarecrow-like mRNA targets is directed by a class of Arabidopsis miRNA Science. 2002; 297:2053-2056 Crossref Scopus (1360) PubMed Google Scholar
  32. [34]34. Mallory, A.C. ∙ Reinhart, B.J. ∙ Bartel, D. ... A viral suppressor of RNA silencing differentially regulates the accumulation of short interfering RNAs and micro-RNAs in tobacco Proc. Natl. Acad. Sci. USA. 2002; 99:15228-15233 Crossref Scopus (209) PubMed Google Scholar
  33. [35]35. Mourrain, P. ∙ Beclin, C. ∙ Elmayan, T. ... Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance Cell. 2000; 101:533-542 Full Text Full Text (PDF) Scopus (900) PubMed Google Scholar
  34. [36]36. Olsen, P.H. ∙ Ambros, V. The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation Dev. Biol. 1999; 216:671-680 Crossref Scopus (972) PubMed Google Scholar
  35. [37]37. Park, W. ∙ Li, J. ∙ Song, R. ... CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana Curr. Biol. 2002; 12:1484-1495 Full Text Full Text (PDF) Scopus (1037) PubMed Google Scholar
  36. [38]38. Pasquinelli, A.E. ∙ Ruvkun, G. Control of developmental timing by microRNAs and their targets Annu. Rev. Cell Dev. Biol. 2002; 18:495-513 Crossref Scopus (293) PubMed Google Scholar
  37. [39]39. Qiu, W. ∙ Park, J.W. ∙ Scholthof, H.B. Tombusvirus P19-mediated suppression of virus-induced gene silencing is controlled by genetic and dosage features that influence pathogenicity Mol. Plant Microbe Interact. 2002; 15:269-280 Crossref Scopus (146) PubMed Google Scholar
  38. [40]40. Ray, A. ∙ Lang, J.D. ∙ Golden, T. ... SHORT INTEGUMENTS1 (SIN1), a gene required for ovule development in Arabidopsis, also controls flowering time Development. 1996; 122:2631-2638 PubMed Google Scholar
  39. [41]41. Ray, S. ∙ Golden, T. ∙ Ray, A. Maternal effects of the short integuments1 mutation on embryo development Dev. Biol. 1996; 180:365-369 Crossref Scopus (89) PubMed Google Scholar
  40. [42]42. Reichmann, J.L. ∙ Meyerowitz, E.M. The AP2/EREBP family of plant transcription factors Biol. Chem. 1998; 379:633-646 PubMed Google Scholar
  41. [43]43. Reinhart, B.J. ∙ Weinstein, E.G. ∙ Rhoades, M.W. ... MicroRNAs in plants Genes Dev. 2002; 16:1616-1626 Crossref Scopus (1835) PubMed Google Scholar
  42. [44]44. Restrepo, M.A. ∙ Freed, D.D. ∙ Carrington, J.C. Nuclear transport of plant potyviral proteins Plant Cell. 1990; 2:987-998 PubMed Google Scholar
  43. [45]45. Rhoades, M.W. ∙ Reinhart, B.J. ∙ Lim, L.P. ... Prediction of plant microRNA targets Cell. 2002; 110:513-520 Full Text Full Text (PDF) Scopus (1891) PubMed Google Scholar
  44. [46]46. Robinson-Beers, K. ∙ Pruitt, R.E. ∙ Gasser, C.S. Ovule development in wild-type Arabidopsis and two female sterile mutants Plant Cell. 1992; 4:1237-1250 PubMed Google Scholar
  45. [47]47. Schauer, S.E. ∙ Jaconsen, S.E. ∙ Meinke, D.W. ... DICER-LIKE1blind men and elephants in arabidopsis development Trends Plant Sci. 2002; 7:487-491 Full Text Full Text (PDF) Scopus (412) PubMed Google Scholar
  46. [48]48. Schwartz, B.W. ∙ Yeung, E.C. ∙ Meinke, D.W. Disruption of morphogenesis and transformation of the suspensor in abnormal suspensor mutants of Arabidopsis Dev. Biol. 1994; 120:3235-3245 Google Scholar
  47. [49]49. Silverstone, A.L. ∙ Ciampaglio, C.N. ∙ Sun, T. The Arabidopsis RGA gene encodes a transcriptional regulator repressing the gibberellin signal transduction pathway Plant Cell. 1998; 10:155-169 PubMed Google Scholar
  48. [50]50. Tang, G. ∙ Reinhart, B.J. ∙ Bartel, D.P. ... A biochemical framework for RNA silencing in plants Genes Dev. 2003; 17:49-63 Crossref Scopus (827) PubMed Google Scholar
  49. [51]51. Vance, V. ∙ Vaucheret, H. RNA silencing in plants—defense and counterdefense Science. 2001; 292:2277-2280 Crossref Scopus (526) PubMed Google Scholar
  50. [52]52. Voinnet, O. ∙ Lederer, C. ∙ Baulcombe, D.C. A viral movement protein prevents spread of the gene silencing signal in Nicotiana benthamiana Cell. 2000; 103:157-167 Full Text Full Text (PDF) Scopus (555) PubMed Google Scholar
  51. [53]53. Voinnet, O. ∙ Pinto, V.M. ∙ Baulcombe, D.C. Suppression of gene silencinga general strategy used by diverse DNA and RNA viruses of plants Proc. Natl. Acad. Sci. USA. 1999; 96:14147-14152 Crossref Scopus (865) PubMed Google Scholar

Cited by

Sorted by citations

Authors
Kasschau, K. D., Xie, Z., Allen, E., Llave, C., Chapman, E. J., Krizan, K. A., & Carrington, J. C.
Venue
Developmental Cell
Publisher
Elsevier BV
Published
2003-02
Volume
4
Issue
2
Pages
205-217
ISSN
1534-5807
Cited by
817
References
3
Language
en

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review