Cited by 40Metal-Catalyzed Oxygenation MechanismsSteroid Chemistry and BiochemistryMetalloenzymes and iron-sulfur proteins

Evidence that compound I is the active species in both the hydroxylase and lyase steps by which P450scc converts cholesterol to pregnenolone: EPR/ENDOR/cryoreduction/annealing studies

Open access
Davydov, Roman, Strushkevich, Natallia, Smil, David, Yantsevich, Aliaksei, Gilep, Andrey, Usanov, Sergey, Hoffman, Brian M.·2015·Biochemistry

Abstract

Cytochrome P450scc (CYP 11A1) catalyzes the conversion of cholesterol (Ch) to pregnenolone, the precursor to steroid hormones. This process proceeds via three sequential monooxygenation reactions: two hydroxylations of Ch first form 22(R)-hydroxycholesterol (HC) and then 20α,22(R)-dihydroxycholesterol (DHC); a lyase reaction then cleaves the C20-C22 bond to form pregnenolone. Recent cryoreduction/annealing studies that employed electron paramagnetic resonance (EPR)/electron nuclear double resonance (ENDOR) spectroscopy [Davydov, R., et al. (2012) J. Am. Chem. Soc. 134, 17149] showed that compound I (Cpd I) is the active intermediate in the first step, hydroxylation of Ch. Herein, we have employed EPR and ENDOR spectroscopy to characterize the intermediates in the second and third steps of the enzymatic process, as conducted by 77 K radiolytic one-electron cryoreduction and subsequent annealing of the ternary oxy-cytochrome P450scc complexes with HC and DHC. This procedure is validated by showing that the cryoreduced ternary complexes of oxy-cytochrome P450scc with HC and DHC are catalytically competent and during annealing generate DHC and pregnenolone, respectively. Cryoreduction of the oxy-P450scc-HC ternary complex trapped at 77K produces the superoxo-ferrous P450scc intermediate along with a minor fraction of ferric hydroperoxo intermediates. The superoxo-ferrous intermediate converts into a ferric-hydroperoxo species after annealing at 145 K. During subsequent annealing at 170-180 K, the ferric-hydroperoxo intermediate converts to the primary product complex with the large solvent kinetic isotope effect that indicates Cpd I is being formed, and (1)H ENDOR measurements of the primary product formed in D2O demonstrate that Cpd I is the active species. They show that the primary product contains Fe(III) coordinated to the 20-O(1)H of DHC with the (1)H derived from substrate, the signature of the Cpd I reaction. Hydroperoxo ferric intermediates are the primary species formed during cryoreduction of the oxy-P450scc-DHC ternary complex, and they decay at 185 K with a strong solvent kinetic isotope effect to form low-spin ferric P450scc. Together, these observations indicated that Cpd I also is the active intermediate in the C20,22 lyase final step. In combination with our previous results, this study thus indicates that Cpd I is the active species in each of the three sequential monooxygenation reactions by which P450scc catalytically converts Ch to pregnenolone.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1021/acs.biochem.5b00903

Cites

36 of 36 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Recent high-resolution temporal enzymatic work indicates that transient cholesterol hydroperoxyl serves as reaction intermediates.

    “Recent high-resolution temporal enzymatic work further indicates that transient cholesterol hydroperoxyl serves as reaction intermediates (48, 49), further supporting the sequential oxidative cleavage model of this enzyme.”

    From Adrenal Mitochondria and Steroidogenesis: From Individual Proteins to Functional Protein Assemblies (2016) · cites this paper as [49]

    The Results sections on the cryoreduced P450scc complexes identify transient hydroperoxo intermediates during the reactions with hydroxycholesterol and dihydroxycholesterol. But the hydroperoxo group is a ligand bound to the enzyme’s ferric heme, not a cholesterol hydroperoxyl intermediate. The Discussion on the final lyase step also rules out a proposed substrate-derived peroxyhemiacetal-like intermediate. Page numbers are not provided in our copy. (LLM, conf=0.86)

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 1

  1. [10]De Voss JJ Cryle MJ 2007 Carbon-Carbon Bond Cleavage by P450 Systems Metal Ions in Life Sciences Sigel A Sigel H Sigel RKO 397 435 John Wiley & Sons, Ltd

Cited by

Sorted by citations

Authors
Davydov, R., Strushkevich, N., Smil, D., Yantsevich, A., Gilep, A., Usanov, S., & Hoffman, B. M.
Affiliations
  • Northwestern University (US)
  • National Academy of Sciences of Belarus (BY)
  • University of Toronto (CA)
  • Institute of Bioorganic Chemistry, National Academy of Sciences of Belarus, Kuprevicha Street 5/2, Minsk 220141, Belarus
Corresponding author
Hoffman, Brian M.
Venue
Biochemistry
Published
2015-11-25
Volume
54
Issue
48
Pages
7089-7097
ISSN
  • 0006-2960 (ISSN-L)
  • 1520-4995
OpenAlex
W2411172204
Cited by
40
References
36
Citations by year
2026: 2 · 2025: 3 · 2024: 3 · 2023: 6 · 2022: 1 · 2020: 2 · 2019: 5 · 2018: 5 · 2017: 7 · 2016: 6
FWCI
2.46
Type
journal article
Language
en
Open access
Locations
  • Biochemistry (publishedVersion)
  • PubMed (publishedVersion)
  • Europe PMC (PubMed Central) (acceptedVersion)
  • PubMed Central (acceptedVersion)
Funders
  • Institute of Bioorganic Chemistry, National Academy of Sciences of Belarus (4/14)
  • National Institute of General Medical Sciences (GM 111097)
Topics
  • Physical Sciences › Chemistry › Inorganic Chemistry › Metal-Catalyzed Oxygenation Mechanisms
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Steroid Chemistry and Biochemistry
  • Physical Sciences › Energy › Renewable Energy, Sustainability and the Environment › Metalloenzymes and iron-sulfur proteins
Keywords
cytochrome P450scc, CYP11A1, compound I, pregnenolone biosynthesis, hydroperoxide lyase, ENDOR spectroscopy, solvent kinetic isotope effect, steroidogenesis
MeSH terms
Animals, Cattle, Cholesterol, Cholesterol Side-Chain Cleavage Enzyme, Electron Spin Resonance Spectroscopy, Humans, Hydroxycholesterols, Hydroxylation, Oxidation-Reduction, Pregnenolone

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review