The DOI matches its Crossref record; 7 of the 7 references it cites were found in a registry or an index.
TorchANI: A Free and Open Source PyTorch-Based Deep Learning Implementation of the ANI Neural Network Potentials
Open accessAbstract
This paper presents TorchANI, a PyTorch-based program for training/inference of ANI (ANAKIN-ME) deep learning models to obtain potential energy surfaces and other physical properties of molecular systems. ANI is an accurate neural network potential originally implemented using C++/CUDA in a program called NeuroChem. Compared with NeuroChem, TorchANI has a design emphasis on being lightweight, user friendly, cross platform, and easy to read and modify for fast prototyping, while allowing acceptable sacrifice on running performance. Because the computation of atomic environmental vectors and atomic neural networks are all implemented using PyTorch operators, TorchANI is able to use PyTorch's autograd engine to automatically compute analytical forces and Hessian matrices, as well as do force training without requiring any additional codes. TorchANI is open-source and freely available on GitHub: https://github.com/aiqm/torchani.
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TensorFlow: Large-Scale Machine Learning on Heterogeneous Distributed Systems
Abadi, M., Agarwal, A., Barham, P., Brevdo, E., Chen, Z., Citro, C., Corrado, G. S., Davis, A., Dean, J., Devin, M., et al. (2016) · arXiv · doi:10.48550/arxiv.1603.04467 · Cited by 9,408
Coupled-cluster theory in quantum chemistry
Bartlett, R. J., & Musiał, M. (2007) · Reviews of Modern Physics · doi:10.1103/revmodphys.79.291 · Cited by 3,343
Fast and Accurate Modeling of Molecular Atomization Energies with Machine Learning
Rupp, M., Tkatchenko, A., Müller, K.-R., & von Lilienfeld, O. A. (2012) · Physical Review Letters · doi:10.1103/physrevlett.108.058301 · Cited by 2,312
ANI-1: an extensible neural network potential with DFT accuracy at force field computational cost
Smith, J. S., Isayev, O., & Roitberg, A. E. (2017) · Chemical Science · doi:10.1039/c6sc05720a · Cited by 1,921
Self-citationLess is more: Sampling chemical space with active learning
Smith, J. S., Nebgen, B., Lubbers, N., Isayev, O., & Roitberg, A. E. (2018) · The Journal of Chemical Physics · doi:10.1063/1.5023802 · Cited by 811
Self-citationPrediction Errors of Molecular Machine Learning Models Lower than Hybrid DFT Error
Faber, F. A., Hutchison, L., Huang, B., Gilmer, J., Schoenholz, S. S., Dahl, G. E., Vinyals, O., Kearnes, S., Riley, P. F., & von Lilienfeld, O. A. (2017) · Journal of Chemical Theory and Computation · doi:10.1021/acs.jctc.7b00577 · Cited by 651
Machine learning molecular dynamics for the simulation of infrared spectra
Gastegger, M., Behler, J., & Marquetand, P. (2017) · Chemical Science · doi:10.1039/c7sc02267k · Cited by 556
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Pandey, M., Fernandez, M., Gentile, F., Isayev, O., Tropsha, A., Stern, A. C., & Cherkasov, A. (2022) · Nature Machine Intelligence · doi:10.1038/s42256-022-00463-x · Cited by 255
Self-citationTorchMD: A Deep Learning Framework for Molecular Simulations
Doerr, S., Majewski, M., Pérez, A., Krämer, A., Clementi, C., Noe, F., Giorgino, T., & De Fabritiis, G. (2021) · Journal of Chemical Theory and Computation · doi:10.1021/acs.jctc.0c01343 · Cited by 230
Mutexa: A Computational Ecosystem for Intelligent Protein Engineering
Yang, Z. J., Shao, Q., Jiang, Y., Jurich, C., Ran, X., Juarez, R. J., Yan, B., Stull, S. L., Gollu, A., & Ding, N. (2023) · Journal of Chemical Theory and Computation · doi:10.1021/acs.jctc.3c00602 · Cited by 28
Active learning of neural network potentials for rare events
(2024) · doi:10.1039/d3dd00216k · Cited by 20
From QM/MM to ML/MM: A new era in multiscale modeling
Grassano, J. S., Pickering, I., Roitberg, A. E., Estrin, D. A., & Semelak, J. A. (2025) · Chemical Physics Reviews · doi:10.1063/5.0260078 · Cited by 20
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Metadata
- Authors
- Gao, X., Ramezanghorbani, F., Isayev, O., Smith, J. S., & Roitberg, A. E.
- Venue
- Journal of Chemical Information and Modeling
- Publisher
- American Chemical Society (ACS)
- Published
- 2020-06-22
- Volume
- 60
- Issue
- 7
- Pages
- 3408-3415
- ISSN
- 1549-9596 (ISSN-L)
- 1549-960X
- OpenAlex
- W3035839386
- Cited by
- 337
- References
- 7
- FWCI
- 14.17
- Type
- journal article
- Language
- en
- Open access
- green
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