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Substrate specificity of the Escherichia coli endonuclease III: Excision of thymine- and cytosine-derived lesions in DNA produced by radiation-generated free radicals

Dizdaroglu, Miral, Laval, Jacques, Boiteux, Serge·1993·Biochemistry

Abstract

The excision of modified bases from DNA by Escherichia coli endonuclease III was investigated. Modified bases were produced in DNA by exposure of dilute buffered solutions of DNA to ionizing radiation under oxic or anoxic conditions. The technique of gas chromatography/mass spectrometry (GC/MS) was used to identify and quantify 16 pyrimidine- and purine-derived DNA lesions. DNA substrates were incubated either with the native enzyme or with the heat-inactivated enzyme. Subsequently, DNA was precipitated. Pellets were analyzed by GC/MS after hydrolysis and derivatization. Supernatant fractions were analyzed after derivatization without hydrolysis. The results provided unequivocal evidence for the excision by E. coli endonuclease III of a number of thymine- and cytosine-derived lesions from DNA. These were 5,6-dihydrothymine, 5-hydroxy-5-methylhydantoin, thymine glycol, 5-hydroxy-6-hydrothymine, 5,6-dihydrouracil, alloxan, uracil glycol, and 5-hydroxy-6-hydrouracil. None of the purine-derived lesions was excised by endonuclease III. The present work extends the substrate specificity of E. coli endonuclease III to another thymine-derived and four cytosine-derived lesions. It is the first investigation of the substrate specificity of this repair enzyme in the context of a large number of pyrimidine- and purine-derived lesions in DNA.

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Metadata

Authors
Dizdaroglu, M., Laval, J., & Boiteux, S.
Venue
Biochemistry
Published
1993-11-01
Volume
32
Issue
45
Pages
12105-12111
ISSN
  • 0006-2960 (ISSN-L)
  • 1520-4995
OpenAlex
W2080733065
Cited by
283
References
2
FWCI
3.62
Type
journal article
Language
en
Open access
closed

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CoChat. (2026). Citation check: Substrate specificity of the Escherichia coli endonuclease III: Excision of thymine- and cytosine-derived lesions in DNA produced by radiation-generated free radicals. https://app.cochat.ai/papers/10.1021/bi00096a022
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Dizdaroglu, M., Laval, J., & Boiteux, S. (1993). Substrate specificity of the Escherichia coli endonuclease III: Excision of thymine- and cytosine-derived lesions in DNA produced by radiation-generated free radicals. Biochemistry. https://doi.org/10.1021/bi00096a022

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