The DOI matches its Crossref record; 72 of the 72 references it cites were found in a registry or an index.
Changes in assembly processes in soil bacterial communities following a wildfire disturbance
Open accessAbstract
Although recent work has shown that both deterministic and stochastic processes are important in structuring microbial communities, the factors that affect the relative contributions of niche and neutral processes are poorly understood. The macrobiological literature indicates that ecological disturbances can influence assembly processes. Thus, we sampled bacterial communities at 4 and 16 weeks following a wildfire and used null deviation analysis to examine the role that time since disturbance has in community assembly. Fire dramatically altered bacterial community structure and diversity as well as soil chemistry for both time-points. Community structure shifted between 4 and 16 weeks for both burned and unburned communities. Community assembly in burned sites 4 weeks after fire was significantly more stochastic than in unburned sites. After 16 weeks, however, burned communities were significantly less stochastic than unburned communities. Thus, we propose a three-phase model featuring shifts in the relative importance of niche and neutral processes as a function of time since disturbance. Because neutral processes are characterized by a decoupling between environmental parameters and community structure, we hypothesize that a better understanding of community assembly may be important in determining where and when detailed studies of community composition are valuable for predicting ecosystem function.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
R: A Language and Environment for Statistical Computing
R Core Team (2025) · doi:10.32614/r.manuals · Cited by 352,181
QIIME allows analysis of high-throughput community sequencing data
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., Gordon, J. I., et al. (2010) · Nature Methods · doi:10.1038/nmeth.f.303 · Cited by 34,887
vegan: Community Ecology Package
Oksanen, J., Simpson, G. L., Blanchet, F. G., Kindt, R., Legendre, P., Minchin, P. R., O'Hara, R. B., Solymos, P., Stevens, M. H. H., Szoecs, E., et al. (2001) · CRAN: Contributed Packages · doi:10.32614/cran.package.vegan · Cited by 22,615
Search and clustering orders of magnitude faster than BLAST
Edgar, R. C. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btq461 · Cited by 20,826
An Ordination of the Upland Forest Communities of Southern Wisconsin
Bray, J. R., & Curtis, J. T. (1957) · Ecological Monographs · doi:10.2307/1942268 · Cited by 11,716
UniFrac: a New Phylogenetic Method for Comparing Microbial Communities
Lozupone, C., & Knight, R. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.12.8228-8235.2005 · Cited by 8,227
The Unified Neutral Theory of Biodiversity and Biogeography
Jetschke, G. (2002) · Ecology · doi:10.1890/0012-9658(2002)083[1771:tuntob]2.0.co;2 · Cited by 6,993
Brookes, P. C., Landman, A., Pruden, G., & Jenkinson, D. S. (1985) · Soil Biology and Biochemistry · doi:10.1016/0038-0717(85)90144-0 · Cited by 5,828
The diversity and biogeography of soil bacterial communities
Fierer, N., & Jackson, R. B. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0507535103 · Cited by 5,711
Van Der Heijden, M. G. A., Bardgett, R. D., & Van Straalen, N. M. (2008) · Ecology Letters · doi:10.1111/j.1461-0248.2007.01139.x · Cited by 5,053
Cited by
Stochastic Community Assembly: Does It Matter in Microbial Ecology?
Zhou, J., & Ning, D. (2017) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00002-17 · Cited by 2,773
Dini-Andreote, F., de Cássia Pereira e Silva, M., Triadó-Margarit, X., Casamayor, E. O., van Elsas, J. D., & Salles, J. F. (2014) · The ISME Journal · doi:10.1038/ismej.2014.54 · Cited by 262
Whitman, T., Whitman, E., Woolet, J., Flannigan, M. D., Thompson, D. K., & Parisien, M.-A. (2019) · Soil Biology and Biochemistry · doi:10.1016/j.soilbio.2019.107571 · Cited by 258
Metadata
- Authors
- Ferrenberg, S., O’Neill, S. P., Knelman, J. E., Todd, B., Duggan, S., Bradley, D., Robinson, T., Schmidt, S. K., Townsend, A. R., Williams, M. W., Cleveland, C. C., Melbourne, B. A., Jiang, L., & Nemergut, D. R.
- Venue
- The ISME Journal
- Publisher
- Oxford University Press (OUP)
- Published
- 2013-02-14
- Volume
- 7
- Issue
- 6
- Pages
- 1102-1111
- ISSN
- 1751-7362 (ISSN-L)
- 1751-7370
- OpenAlex
- W2172076564
- Cited by
- 445
- References
- 72
- FWCI
- 21.01
- Type
- journal article
- Language
- en
- Open access
- green
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Changes in assembly processes in soil bacterial communities following a wildfire disturbance. https://app.cochat.ai/papers/10.1038/ismej.2013.11
- The paper
- Ferrenberg, S., O’Neill, S. P., Knelman, J. E., Todd, B., Duggan, S., Bradley, D., Robinson, T., Schmidt, S. K., Townsend, A. R., Williams, M. W., Cleveland, C. C., Melbourne, B. A., Jiang, L., & Nemergut, D. R. (2013). Changes in assembly processes in soil bacterial communities following a wildfire disturbance. The ISME Journal. https://doi.org/10.1038/ismej.2013.11
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.