Construction of Escherichia coli K‐12 in‐frame, single‐gene knockout mutants: the Keio collection

Baba, Tomoya, Ara, Takeshi, Hasegawa, Miki, Takai, Yuki, Okumura, Yoshiko, Baba, Miki, Datsenko, Kirill A, Tomita, Masaru +2 more·2006·Molecular Systems Biology

Cited by (1,043)

Items 301–400 of 1,043

  1. Strain engineering for improved expression of recombinant proteins in bacteria
    Tomohiro Makino, Γεώργιος Σκρέτας, George Georgiou · 2011 · Microbial Cell Factories
  2. Modulation of bacterial outer membrane vesicle production by envelope structure and content
    Carmen Schwechheimer, Adam J. Kulp, Meta J. Kuehn · 2014 · BMC Microbiology
  3. Lambda Red Recombineering in Escherichia coli Occurs Through a Fully Single-Stranded Intermediate
    Joshua A. Mosberg, Marc J. Lajoie, George McDonald Church · 2010 · Genetics
  4. Defining Gene-Phenotype Relationships in Acinetobacter baumannii through One-Step Chromosomal Gene Inactivation
    Ashley T. Tucker, Emily M. Nowicki, Joseph M. Boll, Gregory A. Knauf, Nora C. Burdis, M. Stephen Trent, Bryan W. Davies · 2014 · mBio
  5. Enterohemorrhagic Escherichia coli Biofilms Are Inhibited by 7-Hydroxyindole and Stimulated by Isatin
    Jintae Lee, T. Bansal, A. Jayaraman, W. Bentley, T. Wood · 2007 · Applied and Environmental Microbiology
  6. Complete Genome Sequence of Escherichia coli BW25113
    Frédéric Grenier, Dominick Matteau, Vincent Baby, Sébastien Rodrigue · 2014 · Genome Announcements
  7. Comparative Evaluation of the Antimicrobial Activity of Different Antimicrobial Peptides against a Range of Pathogenic Bacteria
    Anna Elisabeth Ebbensgaard, Hanne Mordhorst, Michael Toft Overgaard, Claus Gyrup Nielsen, Frank M. Aarestrup, Egon Bech Hansen · 2015 · PLoS ONE
  8. Genome-Wide Screening of Genes Required for Swarming Motility inEscherichia coliK-12
    Tetsuyoshi Inoue, Ryuji Shingaki, Shotaro Hirose, Kaori Waki, Hirotada Mori, Kazuhiro Fukui · 2006 · Journal of Bacteriology
  9. Enhanced hydrogen production from glucose by metabolically engineered Escherichia coli
    Toshinari Maeda, Viviana Sánchez-Torres, Thomas Keith Wood · 2007 · Applied Microbiology and Biotechnology
  10. EcoGene 3.0
    Jindan Zhou, Kenneth E. Rudd · 2012 · Nucleic Acids Research
  11. Discovery of phage determinants that confer sensitivity to bacterial immune systems
    Stokar-Avihail, Avigail, Fedorenko, Taya, Hör, Jens, Garb, Jeremy, Leavitt, Azita, Millman, Adi, Shulman, Gabriela, Wojtania, Nicole, Melamed, Sarah, Amitai, Gil et al. · 2023 · Cell
  12. Genome-scale Analysis of Escherichia coli FNR Reveals Complex Features of Transcription Factor Binding
    Kevin S. Myers, Huihuang Yan, Irene M. Ong, Dongjun Chung, Kun Liang, Frances Tran, Sündüz Keleş, Robert C. Landick, Patricia J. Kiley · 2013 · PLoS Genetics
  13. A coordinated network of transporters with overlapping specificities provides a robust survival strategy
    Nir Tal, Shimon Schuldiner · 2009 · Proceedings of the National Academy of Sciences
  14. Mutational fitness effects in RNA and single-stranded DNA viruses: common patterns revealed by site-directed mutagenesis studies
    Rafael Sanjuán · 2010 · Philosophical Transactions of the Royal Society B Biological Sciences
  15. Identifying Small Proteins by Ribosome Profiling with Stalled Initiation Complexes
    Jeremy Weaver, Fuad Mohammad, Allen R. Buskirk, Gisela Storz · 2019 · mBio
  16. Escherichia coli K‐12 possesses multiple cryptic but functional chaperone–usher fimbriae with distinct surface specificities
    Charalampia‐Georgia Korea, Réana Badouraly, Marie‐Christine Prévost, Jean‐Marc Ghigo, Christophe Beloin · 2010 · Environmental Microbiology
  17. Combatting bacterial infections by killing persister cells with mitomycin C
    Brian W. Kwan, Nityananda Chowdhury, Thomas Keith Wood · 2015 · Environmental Microbiology
  18. The Escherichia coli Cpx Envelope Stress Response Regulates Genes of Diverse Function That Impact Antibiotic Resistance and Membrane Integrity
    Tracy L. Raivio, Shannon K. D. Leblanc, Nancy L. Price · 2013 · Journal of Bacteriology
  19. A Stress Response that Monitors and Regulates mRNA Structure Is Central to Cold Shock Adaptation
    Yan Zhang, David H. Burkhardt, Silvi Rouskin, Gene‐Wei Li, Jonathan S. Weissman, Carol A. Gross · 2018 · Molecular Cell
  20. Dynamics in the mixed microbial concourse
    Edwin H. Wintermute, Pamela A. Silver · 2010 · Genes & Development
  21. An antimicrobial peptide that inhibits translation by trapping release factors on the ribosome
    Tanja Florin, Cristina Maracci, Michael Graf, Prajwal Karki, Dorota Klepacki, Otto Berninghausen, Roland Beckmann, Nora Vázquez‐Laslop, Daniel N. Wilson, Marina V. Rodnina et al. · 2017 · Nature Structural & Molecular Biology
  22. High-Level dCas9 Expression Induces Abnormal Cell Morphology in Escherichia coli
    Suhyung Cho, Donghui Choe, Eun‐Ju Lee, Sun Chang Kim, Bernhard Ørn Palsson, Byung‐Kwan Cho · 2018 · ACS Synthetic Biology
  23. Whole proteome analysis of post-translational modifications: Applications of mass-spectrometry for proteogenomic annotation
    Nitin Gupta, Stephen W. Tanner, Navdeep Jaitly, Joshua Adkins, Mary S. Weir Lipton, Robert Alan Edwards, Margaret F. Romine, Andrei L. Osterman, Vineet Bafna, Richard D. Smith et al. · 2007 · Genome Research
  24. Iron-Sulfur (Fe/S) Protein Biogenesis: Phylogenomic and Genetic Studies of A-Type Carriers
    Daniel Vinella, Céline Brochier‐Armanet, Laurent Loiseau, Emmanuel Talla, Frédéric Barras · 2009 · PLoS Genetics
  25. Sialic Acid Catabolism Confers a Competitive Advantage to Pathogenic Vibrio cholerae in the Mouse Intestine
    Salvador Almagro‐Moreno, E. Fidelma Boyd · 2009 · Infection and Immunity
  26. Three Dimensional Structure of the MqsR:MqsA Complex: A Novel TA Pair Comprised of a Toxin Homologous to RelE and an Antitoxin with Unique Properties
    Breann L. Brown, Simina Grigoriu, Younghoon Kim, Jennifer M. Arruda, Andrew Davenport, Thomas Keith Wood, Wolfgang Peti, Rebecca Page · 2009 · PLoS Pathogens
  27. Defined Single-Gene and Multi-Gene Deletion Mutant Collections in Salmonella enterica sv Typhimurium
    Steffen Porwollik, Carlos A. Santiviago, Pui Cheng, Fred Long, Prerak Desai, Jennifer Fredlund, Shabarinath Srikumar, Cecilia A. Silva-Valenzuela, Weiping Chu, Xin Chen et al. · 2014 · PLoS ONE
  28. Dual Molecular Signals Mediate the Bacterial Response to Outer-Membrane Stress
    Santiago Lima, Monica S. Guo, Rachna Chaba, Carol A. Gross, Robert T. Sauer · 2013 · Science
  29. Escherichia coli Unsaturated Fatty Acid Synthesis
    Youjun Feng, John E. Cronan · 2009 · Journal of Biological Chemistry
  30. Age of Inoculum Strongly Influences Persister Frequency and Can Mask Effects of Mutations Implicated in Altered Persistence
    Hannes Luidalepp, Arvi Jõers, Niilo Kaldalu, Tanel Tenson · 2011 · Journal of Bacteriology
  31. Contact‐dependent growth inhibition requires the essential outer membrane protein BamA (YaeT) as the receptor and the inner membrane transport protein AcrB
    Stephanie K. Aoki, Juliana C. Malinverni, Kyle Jacoby, Benjamin Thomas, Rupinderjit Pamma, Brooke Trinh, Susan Remers, Julia Webb, Bruce A. Braaten, Thomas J. Silhavy et al. · 2008 · Molecular Microbiology
  32. Thermal proteome profiling in bacteria: probing protein state in vivo
    André Mateus, Jacob Bobonis, Nils Kurzawa, Frank Stein, Dominic Helm, Johannes F. Hevler, Athanasios Typas, Mikhail M. Savitski · 2018 · Molecular Systems Biology
  33. Analysis of Pools of Targeted Salmonella Deletion Mutants Identifies Novel Genes Affecting Fitness during Competitive Infection in Mice
    Carlos A. Santiviago, Melissa Reynolds, Steffen Porwollik, Sang-Ho Choi, Fred Long, Helene L. Andrews‐Polymenis, Michael McClelland · 2009 · PLoS Pathogens
  34. Efficient programmable gene silencing by Cascade
    Devashish Rath, Lina Amlinger, Mirthe Hoekzema, Praneeth Reddy Devulapally, Magnus Lundgren · 2014 · Nucleic Acids Research
  35. Role of the Biofilm Master Regulator CsgD in Cross-Regulation between Biofilm Formation and Flagellar Synthesis
    Hiroshi Ogasawara, Kaneyoshi Yamamoto, Akira Ishihama · 2011 · Journal of Bacteriology
  36. A small-molecule inhibitor of BamA impervious to efflux and the outer membrane permeability barrier
    Elizabeth M. Hart, Angela M. Mitchell, Anna Konovalova, Marcin Grabowicz, Jessica Ruolin Sheng, Xiaoqing Han, Frances P. Rodriguez‐Rivera, Adam G. Schwaid, Juliana C. Malinverni, Carl J. Balibar et al. · 2019 · Proceedings of the National Academy of Sciences
  37. Privatization of cooperative benefits stabilizes mutualistic cross-feeding interactions in spatially structured environments
    Samay Pande, Filip Kaftan, Stefan N. Lang, Aleš Svatoš, Sebastian Germerodt, Christian Kost · 2015 · The ISME Journal
  38. Toxin-Antitoxin Systems in Escherichia coli Influence Biofilm Formation through YjgK (TabA) and Fimbriae
    Younghoon Kim, Xiaoxue Wang, Qun Ma, Xue‐Song Zhang, Thomas Keith Wood · 2008 · Journal of Bacteriology
  39. OGEE: an online gene essentiality database
    Wei‐Hua Chen, Pablo Mínguez, Martin J. Lercher, Peer Bork B · 2011 · Nucleic Acids Research
  40. Fine-tuning of the ribosomal decoding center by conserved methyl-modifications in the Escherichia coli 16S rRNA
    木村聡, Tsutomu Suzuki · 2009 · Nucleic Acids Research
  41. Metabolic engineering to enhance bacterial hydrogen production
    Toshinari Maeda, Viviana Sánchez-Torres, Thomas Keith Wood · 2007 · Microbial Biotechnology
  42. General and condition-specific essential functions of Pseudomonas aeruginosa
    Samuel A. Lee, Larry A. Gallagher, Metawee Thongdee, Benjamin J. Staudinger, Soyeon I. Lippman, Pradeep Kumar Singh, Colin Manoil · 2015 · Proceedings of the National Academy of Sciences
  43. Coordination of peptidoglycan synthesis and outer membrane constriction during Escherichia coli cell division
    Andrew N Gray, Alexander J. F. Egan, Inge L. van't Veer, Jolanda Verheul, Alexandre Colavin, Alexandra Koumoutsi, Jacob Biboy, Maarten A. F. Altelaar, Mirjam J. A. Damen, Kerwyn Casey Huang et al. · 2015 · eLife
  44. Evolution combined with genomic study elucidates genetic bases of isobutanol tolerance in Escherichia coli
    Minty, Jeremy J, Lesnefsky, Ann A, Lin, Fengming, Chen, Yu, Zaroff, Ted A, Veloso, Artur B, Xie, Bin, McConnell, Catie A, Ward, Rebecca J, Schwartz, Donald R et al. · 2011 · Microbial Cell Factories
  45. Bacterial persistence is an active σS stress response to metabolic flux limitation
    Jakub Leszek Radzikowski, Silke R. Vedelaar, David J. Siegel, Alvaro Darío Ortega, Alexander Schmidt, Matthias Heinemann · 2016 · Molecular Systems Biology
  46. The essential gene set of a photosynthetic organism
    Benjamin E. Rubin, Kelly M. Wetmore, Morgan N. Price, Spencer Diamond, Ryan K. Shultzaberger, Laura C. Lowe, Genevieve Curtin, Adam P. Arkin, Adam M. Deutschbauer, Susan S. Golden · 2015 · Proceedings of the National Academy of Sciences
  47. The proline-rich antimicrobial peptide Onc112 inhibits translation by blocking and destabilizing the initiation complex
    A. Carolin Seefeldt, Fabian Nguyen, Stéphanie Antunes, Natacha Pérébaskine, Michael Graf, Stefan Arenz, Krishna Kishore Inampudi, Céline Douat, Gilles Guichard, Daniel N. Wilson et al. · 2015 · Nature Structural & Molecular Biology
  48. Distinct XPPX sequence motifs induce ribosome stalling, which is rescued by the translation elongation factor EF-P
    Lauri Peil, Agata L. Starosta, Jürgen Lassak, Gemma Catherine Atkinson, Kai Virumäe, Michaela Spitzer, Tanel Tenson, Kirsten Jung, Jaanus Rèmme, Daniel N. Wilson · 2013 · Proceedings of the National Academy of Sciences
  49. Engineered Bacterial Outer Membrane Vesicles with Enhanced Functionality
    Jae‐Young Kim, Anne M. Doody, David J. Chen, Gina H. Cremona, Michael Louis Shuler, David A. Putnam, Matthew P. DeLisa · 2008 · Journal of Molecular Biology
  50. Synthetic quorum-sensing circuit to control consortial biofilm formation and dispersal in a microfluidic device
    Seok Hoon Hong, Manjunath Hegde, Jeongyun Kim, Xiaoxue Wang, Arul Jayaraman, Thomas Keith Wood · 2012 · Nature Communications
  51. Genomic analysis of DNA binding and gene regulation by homologous nucleoid-associated proteins IHF and HU in Escherichia coli K12
    Ana I. Prieto, Christina Kahramanoglou, Ruhi M. Ali, Gillian M. Fraser, Aswin Sai Narain Seshasayee, Nicholas M. Luscombe · 2011 · Nucleic Acids Research
  52. Reading canonical and modified nucleobases in 16S ribosomal RNA using nanopore native RNA sequencing
    Andrew M. Smith, Miten Jain, Logan Mulroney, Daniel R. Garalde, Mark A. Akeson · 2019 · PLoS ONE
  53. Homologs of the Acinetobacter baumannii AceI Transporter Represent a New Family of Bacterial Multidrug Efflux Systems
    Karl A. Hassan, Qi Liu, Peter J. F. Henderson, Ian T. Paulsen · 2015 · mBio
  54. Repairing oxidized proteins in the bacterial envelope using respiratory chain electrons
    Alexandra Gennaris, Benjamin Ezraty, Camille Henry, Rym Agrebi, Alexandra Vergnes, Emmanuel Oheix, Julia Bos, Pauline Leverrier, Léon Espinosa, Joanna Szewczyk et al. · 2015 · Nature
  55. Determinants of spontaneous mutation in the bacterium Escherichia coli as revealed by whole-genome sequencing
    Patricia L. Foster, Heewook Lee, Ellen M. Popodi, Jesse P. Townes, Haixu Tang · 2015 · Proceedings of the National Academy of Sciences
  56. Genetic selection designed to stabilize proteins uncovers a chaperone called Spy
    Shu Quan, Philipp Koldewey, Tim L. Tapley, Nadine Kirsch, Karen M. Ruane, Jennifer Pfizenmaier, Rong Shi, Stephan Hofmann, Linda Foit, Guoping Ren et al. · 2011 · Nature Structural & Molecular Biology
  57. MACBETH: Multiplex automated Corynebacterium glutamicum base editing method
    Yu Wang, Ye Liu, Jiao Liu, Yanmei Guo, Liwen Fan, Xiaomeng Ni, Xiaomei Zheng, Meng Wang, Ping Zheng, Jibin Sun et al. · 2018 · Metabolic Engineering
  58. Genetic Architecture of Intrinsic Antibiotic Susceptibility
    Hany S. Girgis, Alison K. Hottes, Saeed Tavazoie · 2009 · PLoS ONE
  59. Transcriptomic and biochemical analyses identify a family of chlorhexidine efflux proteins
    Karl A. Hassan, Scott M. Jackson, Anahit Penesyan, Simon G. Patching, Sasha G. Tetu, Bart A. Eijkelkamp, Melissa H. Brown, Peter J. F. Henderson, Ian T. Paulsen · 2013 · Proceedings of the National Academy of Sciences
  60. Nitrogen stress response and stringent response are coupled in Escherichia coli
    Daniel R. Brown, Geraint R. Barton, Zhensheng Pan, Martin Buck, Sivaramesh Wigneshweraraj · 2014 · Nature Communications
  61. Enhanced resistance to nanoparticle toxicity is conferred by overproduction of extracellular polymeric substances
    Nimisha Joshi, Bryne Tendelo Ngwenya, Christopher E. French · 2012 · Journal of Hazardous Materials
  62. Bacterial retrons encode phage-defending tripartite toxin–antitoxin systems
    Bobonis, Jacob, Mitosch, Karin, Mateus, André, Karcher, Nicolai, Kritikos, George, Selkrig, Joel, Zietek, Matylda, Monzon, Vivian, Pfalz, Birgit, Garcia-Santamarina, Sarela et al. · 2022 · Nature
  63. The intrinsic resistome of bacterial pathogens
    Jorge Olivares‐Pacheco, Alejandra Bernardini, Guillermo García‐León, Fernando Corona, María Blanca Sánchez, José Luis Martínez · 2013 · Frontiers in Microbiology
  64. Essence of life: essential genes of minimal genomes
    Mario Juhas, Leo Eberl, John I. Glass · 2011 · Trends in Cell Biology
  65. Multicopy Suppression Underpins Metabolic Evolvability
    Wayne M. Patrick, Erik M. Quandt, Daniel B. Swartzlander, Ichiro Matsumura · 2007 · Molecular Biology and Evolution
  66. Microbial Siderophore Enterobactin Promotes Mitochondrial Iron Uptake and Development of the Host via Interaction with ATP Synthase
    Qi, Bin, Han, Min · 2018 · Cell
  67. Stoichiometric modelling of cell metabolism
    Francisco Llaneras, Jesús Picó · 2008 · Journal of Bioscience and Bioengineering
  68. The incoherent feed‐forward loop can generate non‐monotonic input functions for genes
    Shai Kaplan, Anat Bren, Erez Dekel, Uri S. Alon · 2008 · Molecular Systems Biology
  69. Disruption of lipid homeostasis in the Gram-negative cell envelope activates a novel cell death pathway
    Holly A. Sutterlin, Handuo Shi, Kerrie L. May, Amanda V. Miguel, Somya Khare, Kerwyn Casey Huang, Thomas J. Silhavy · 2016 · Proceedings of the National Academy of Sciences
  70. Dynamic 3D proteomes reveal protein functional alterations at high resolution in situ
    Valentina Cappelletti, Thomas Hauser, Ilaria Piazza, Monika Pepelnjak, Liliana Malinovska, Tobias Fuhrer, Yaozong Li, Christian Dörig, Paul J. Boersema, Ludovic C. J. Gillet et al. · 2020 · Cell
  71. A cyclic form of N6-threonylcarbamoyladenosine as a widely distributed tRNA hypermodification.
    K. Miyauchi, S. Kimura, Tsutomu Suzuki · 2013 · Nature Chemical Biology
  72. Determination of bacterial rod shape by a novel cytoskeletal membrane protein
    Daisuke Shiomi, Masako Sakai, Hironori Niki · 2008 · The EMBO Journal
  73. The Chromosomal Toxin Gene yafQ Is a Determinant of Multidrug Tolerance for Escherichia coli Growing in a Biofilm
    Joe Jonathan Harrison, William D. Wade, Sarah V. Akierman, Caterina Vacchi‐Suzzi, Carol A. Stremick, Raymond Joseph Turner, Howard Ceri · 2009 · Antimicrobial Agents and Chemotherapy
  74. Persister Cells in Biofilm Associated Infections
    Brian P. Conlon, Sarah E. Rowe, Kim Lewis · 2014 · Advances in experimental medicine and biology
  75. Evolutionary Convergence of Pathway-Specific Enzyme Expression Stoichiometry
    Jean‐Benoît Lalanne, James Taggart, Monica S. Guo, Lydia Herzel, Ariel Schieler, Gene‐Wei Li · 2018 · Cell
  76. Painting with light-powered bacteria
    Jochen Arlt, Vincent Arnaud Martinez, Angela J Dawson, Teuta Piližota, Wilson C. K. Poon · 2018 · Nature Communications
  77. Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization
    Grigory E. Pinchuk, Dmitry A. Rodionov, Chen Yang, Xiaoqing Li, Andrei L. Osterman, Etienne Dervyn, Oleg V. Geydebrekht, Samantha B. Reed, Margaret F. Romine, F. Collart et al. · 2009 · Proceedings of the National Academy of Sciences
  78. Combination chemical genetics
    Lehár, Joseph, Stockwell, Brent R, Giaever, Guri, Nislow, Corey · 2008 · Nature Chemical Biology
  79. The Serum Resistome of a Globally Disseminated Multidrug Resistant Uropathogenic Escherichia coli Clone
    Minh‐Duy Phan, Kate M. Peters, Sohinee Sarkar, Samuel W. Lukowski, Luke P. Allsopp, Danilo Gomes Moriel, Maud E. S. Achard, Makrina Totsika, Vikki M. Marshall, Mathew Upton et al. · 2013 · PLoS Genetics
  80. Mechanistic insight into the ribosome biogenesis functions of the ancient protein KsgA
    Keith Connolly, Jason P. Rife, Gloria M. Culver · 2008 · Molecular Microbiology
  81. A systematic survey of in vivo obligate chaperonin‐dependent substrates
    Kei Fujiwara, Yasushi Ishihama, Kenji Nakahigashi, Tomoyoshi Soga, Hideki Taguchi · 2010 · The EMBO Journal
  82. High-affinity monoclonal IgA regulates gut microbiota and prevents colitis in mice
    Shinsaku Okai, Fumihito Usui, Shuhei Yokota, Yusaku Hori-i, Makoto Hasegawa, Toshinobu Nakamura, Manabu Kurosawa, Seiji Okada, Kazuya Yamamoto, Eri Nishiyama et al. · 2016 · Nature Microbiology
  83. Extending the Host Range of Bacteriophage Particles for DNA Transduction
    Ido Yosef, Moran G. Goren, Rea Globus, Shahar Molshanski-Mor, Udi Qimron · 2017 · Molecular Cell
  84. AcrB: a mean, keen, drug efflux machine
    Jessica Kobylka, Miriam S. Kuth, Reinke T. Müller, Eric R. Geertsma, Klaas Martinus Pos · 2019 · Annals of the New York Academy of Sciences
  85. Production of poly(3-hydroxybutyrate-co-4-hydroxybutyrate) from unrelated carbon sources by metabolically engineered Escherichia coli
    Zhengjun Li, Zhenyu Shi, Jia Jian, Yingying Guo, Qiong Wu, Guo‐Qiang Chen · 2010 · Metabolic Engineering
  86. Defining synonymous codon compression schemes by genome recoding
    Kaihang Wang, Julius Fredens, Simon F. Brunner, Samuel H. Kim, Tiongsun Chia, Jason W. Chin · 2016 · Nature
  87. Bacteria-mediated hypoxia functions as a signal for mosquito development
    Kerri L. Coon, Luca Valzania, David A. McKinney, Kevin J. Vogel, Mark R. Brown, Michael R. Strand · 2017 · Proceedings of the National Academy of Sciences
  88. Structural basis for dual-mode inhibition of the ABC transporter MsbA
    Hoangdung Ho, Anh Miu, Mary Kate Alexander, Natalie K. Garcia, Angela Oh, Inna Zilberleyb, Mike Reichelt, Cary D. Austin, Christine Tam, Stephanie K. Shriver et al. · 2018 · Nature
  89. The single-cell chemostat: an agarose-based, microfluidic device for high-throughput, single-cell studies of bacteria and bacterial communities
    Jeffrey R. Moffitt, Jeffrey B. Lee, Philippe Cluzel · 2012 · Lab on a Chip
  90. High-throughput mapping of the phage resistance landscape in E. coli
    Mutalik, Vivek K., Adler, Benjamin A., Rishi, Harneet S., Piya, Denish, Zhong, Crystal, Koskella, Britt, Kutter, Elizabeth M., Calendar, Richard, Novichkov, Pavel S., Price, Morgan N. et al. · 2020 · PLOS Biology
  91. Generation of reactive oxygen species by lethal attacks from competing microbes
    Tao Dong, Shiqi Dong, Christy Catalano, Richard A. Moore, Xiaoye Liang, John J. Mekalanos · 2015 · Proceedings of the National Academy of Sciences
  92. Metabolically engineered bacteria for producing hydrogen via fermentation
    Gönül Vardar, Toshinari Maeda, Thomas Keith Wood · 2007 · Microbial Biotechnology
  93. Indole prevents Escherichia coli cell division by modulating membrane potential
    Catalin Chimerel, Christopher M. Field, Silvia Piñero-Fernández, Ulrich F. Keyser, David Summers · 2012 · Biochimica et Biophysica Acta (BBA) - Biomembranes
  94. Cross‐species chemogenomic profiling reveals evolutionarily conserved drug mode of action
    Laura Kapitzky, Pedro Beltrão, Theresa J. Berens, Nadine C. Gassner, Chunshui Zhou, Arthur Wüster, Julie Tsu-Yu Wu, M. Madan Babu, Stephen Joseph Elledge, David Paul Toczyski et al. · 2010 · Molecular Systems Biology
  95. Sizing up the bacterial cell cycle
    Lisa Willis, Kerwyn Casey Huang · 2017 · Nature Reviews Microbiology
  96. RodZ, a component of the bacterial core morphogenic apparatus
    S. Anisah Alyahya, Roger P. Alexander, Teresa Costa, Adriano O. Henriques, Thierry Emonet, Christine Jacobs · 2009 · Proceedings of the National Academy of Sciences
  97. Bacterial persistence increases as environmental fitness decreases
    Seok Hoon Hong, Xiaoxue Wang, Hazel F. O’Connor, Michael J. Benedik, Thomas Keith Wood · 2012 · Microbial Biotechnology
  98. Regulation of cell size in response to nutrient availability by fatty acid biosynthesis in Escherichia coli
    Zhizhong Yao, Rebecca Miller Davis, Roy Kishony, Daniel E. Kahne, Natividad Ruiz · 2012 · Proceedings of the National Academy of Sciences
  99. Towards systems metabolic engineering in Pichia pastoris
    Jan-Philipp Schwarzhans, Tobias Luttermann, Martina Geier, Jörn Kalinowski, Karl Friehs · 2017 · Biotechnology Advances
  100. Single-cell imaging and characterization of Escherichia coli persister cells to ofloxacin in exponential cultures
    Frédéric Goormaghtigh, Laurence Van Melderen · 2019 · Science Advances