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Targeted deletion of the 9p21 non-coding coronary artery disease risk interval in mice

Open access
Visel, Axel, Zhu, Yiwen, May, Dalit, Afzal, Veena, Gong, Elaine, Attanasio, Catia, Blow, Matthew J., Cohen, Jonathan C., Rubin, Edward M., Pennacchio, Len A.·2010·Nature

Abstract

Sequence polymorphisms in a 58-kilobase (kb) interval on chromosome 9p21 confer a markedly increased risk of coronary artery disease (CAD), the leading cause of death worldwide. The variants have a substantial effect on the epidemiology of CAD and other life-threatening vascular conditions because nearly one-quarter of Caucasians are homozygous for risk alleles. However, the risk interval is devoid of protein-coding genes and the mechanism linking the region to CAD risk has remained enigmatic. Here we show that deletion of the orthologous 70-kb non-coding interval on mouse chromosome 4 affects cardiac expression of neighbouring genes, as well as proliferation properties of vascular cells. Chr4Δ70kb/Δ70kb mice are viable, but show increased mortality both during development and as adults. Cardiac expression of two genes near the non-coding interval, Cdkn2a and Cdkn2b, is severely reduced in chr4Δ70kb/Δ70kb mice, indicating that distant-acting gene regulatory functions are located in the non-coding CAD risk interval. Allele-specific expression of Cdkn2b transcripts in heterozygous mice showed that the deletion affects expression through a cis-acting mechanism. Primary cultures of chr4Δ70kb/Δ70kb aortic smooth muscle cells exhibited excessive proliferation and diminished senescence, a cellular phenotype consistent with accelerated CAD pathogenesis. Taken together, our results provide direct evidence that the CAD risk interval has a pivotal role in regulation of cardiac Cdkn2a/b expression, and suggest that this region affects CAD progression by altering the dynamics of vascular cell proliferation.

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Metadata

Authors
Visel, A., Zhu, Y., May, D., Afzal, V., Gong, E., Attanasio, C., Blow, M. J., Cohen, J. C., Rubin, E. M., & Pennacchio, L. A.
Venue
Nature
Published
2010-02-21
Volume
464
Issue
7287
Pages
409-412
ISSN
  • 0028-0836 (ISSN-L)
  • 1476-4687
OpenAlex
W1543651946
Cited by
462
References
10
FWCI
37.55
Type
journal article
Language
en
Open access
green

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CoChat. (2026). Citation check: Targeted deletion of the 9p21 non-coding coronary artery disease risk interval in mice. https://app.cochat.ai/papers/10.1038/nature08801
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Visel, A., Zhu, Y., May, D., Afzal, V., Gong, E., Attanasio, C., Blow, M. J., Cohen, J. C., Rubin, E. M., & Pennacchio, L. A. (2010). Targeted deletion of the 9p21 non-coding coronary artery disease risk interval in mice. Nature. https://doi.org/10.1038/nature08801

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