The DOI matches its Crossref record; 54 of the 54 references it cites were found in a registry or an index.
Structural basis for iron piracy by pathogenic Neisseria
Open accessAbstract
Neisseria are obligate human pathogens causing bacterial meningitis, septicaemia and gonorrhoea. Neisseria require iron for survival and can extract it directly from human transferrin for transport across the outer membrane. The transport system consists of TbpA, an integral outer membrane protein, and TbpB, a co-receptor attached to the cell surface; both proteins are potentially important vaccine and therapeutic targets. Two key questions driving Neisseria research are how human transferrin is specifically targeted, and how the bacteria liberate iron from transferrin at neutral pH. To address these questions, we solved crystal structures of the TbpA-transferrin complex and of the corresponding co-receptor TbpB. We characterized the TbpB-transferrin complex by small-angle X-ray scattering and the TbpA-TbpB-transferrin complex by electron microscopy. Our studies provide a rational basis for the specificity of TbpA for human transferrin, show how TbpA promotes iron release from transferrin, and elucidate how TbpB facilitates this process.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“The uptake of transferrin by Neisseria species is specific to hominid transferrin, indicating that this specialized uptake mechanism facilitates their residence in the human host and several other hominids83.”
From Iron homeostasis in host defence and inflammation (2015) · cites this paper as [83]
In the citing paper
“TbpA and TbpB are induced along with several other proteins in the outer membranes of N. meningitidis under Fe-restricted conditions [30].”
From Strategies of intracellular pathogens for obtaining iron from the environment (2015) · cites this paper as [30]
In the citing paper
“In the case of Neisseria iron is extracted from the C-lobe of transferrin even at neutral pH”
From Iron in immune cell function and host defense (2021) · cites this paper as [15]
In the citing paper
“transferrin-binding protein A (TbpA), an important virulence factor in several human pathogens including Neisseria meningitidis, Neisseria gonorrhoeae, Haemophilus influenzae, and Moraxella catarrhalis, as well as a number of agricultural pathogens (Figure 2A) 21, 37, 38, 39, 40, 41.”
From Buried Treasure: Evolutionary Perspectives on Microbial Iron Piracy (2015) · cites this paper as [41]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
VMD: visual molecular dynamics
Humphrey, W., Dalke, A., & Schulten, K. (1996) · Journal of Molecular Graphics · doi:10.1016/0263-7855(96)00018-5 · Cited by 66,952
UCSF Chimera—A visualization system for exploratory research and analysis
Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C., & Ferrin, T. E. (2004) · Journal of Computational Chemistry · doi:10.1002/jcc.20084 · Cited by 46,047
[20] Processing of X-ray diffraction data collected in oscillation mode
Otwinowski, Z., & Minor, W. (1997) · Methods in Enzymology · doi:10.1016/s0076-6879(97)76066-x · Cited by 33,475
Coot : model-building tools for molecular graphics
Emsley, P., & Cowtan, K. (2004) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444904019158 · Cited by 30,571
Phaser crystallographic software
McCoy, A. J., Grosse-Kunstleve, R. W., Adams, P. D., Winn, M. D., Storoni, L. C., & Read, R. J. (2007) · Journal of Applied Crystallography · doi:10.1107/s0021889807021206 · Cited by 20,612
Scalable molecular dynamics with NAMD
Phillips, J. C., Braun, R., Wang, W., Gumbart, J., Tajkhorshid, E., Villa, E., Chipot, C., Skeel, R. D., Kalé, L., & Schulten, K. (2005) · Journal of Computational Chemistry · doi:10.1002/jcc.20289 · Cited by 16,914
Self-citationJalview Version 2—a multiple sequence alignment editor and analysis workbench
Waterhouse, A. M., Procter, J. B., Martin, D. M. A., Clamp, M. E., & Barton, G. J. (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp033 · Cited by 10,349
The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling
Arnold, K., Bordoli, L., Kopp, J., & Schwede, T. F. (2005) · Bioinformatics · doi:10.1093/bioinformatics/bti770 · Cited by 7,031
PHENIX : building new software for automated crystallographic structure determination
Adams, P. D., Grosse-Kunstleve, R. W., Hung, L.-W., Ioerger, T. R., McCoy, A. J., Moriarty, N. W., Read, R. J., Sacchettini, J. C., Sauter, N. K., & Terwilliger, T. C. (2002) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444902016657 · Cited by 4,361
DAMMIF , a program for rapid ab-initio shape determination in small-angle scattering
Franke, D., & Svergun, D. I. (2009) · Journal of Applied Crystallography · doi:10.1107/s0021889809000338 · Cited by 2,021
Flagged first, then by citations
Cited by
Sorted by citations
Items 201–263 of 263
Reversible immobilization of a protein to a gold surface through multiple host–guest interactions
Schwarz, D. H., Elgaher, W. A. M., Hollemeyer, K., Hirsch, A. K. H., & Wenz, G. (2019) · Journal of Materials Chemistry B · doi:10.1039/c9tb00560a · Cited by 6
Alrouji, M., Yasmin, S., Alhumaydhi, F. A., Sharaf, S. E., Shahwan, M. J., Furkan, M., Khan, R. H., & Shamsi, A. (2024) · Frontiers in Pharmacology · doi:10.3389/fphar.2024.1397332 · Cited by 5
Shamsi, A., Shahwan, M. J., Gupta, D. D., Abdullah, K. M., & Khan, M. S. (2023) · Molecular Neurobiology · doi:10.1007/s12035-023-03696-y · Cited by 5
Alrouji, M., Alhumaydhi, F. A., Venkatesan, K., Sharaf, S. E., Shahwan, M. J., & Shamsi, A. (2024) · Frontiers in Pharmacology · doi:10.3389/fphar.2024.1348128 · Cited by 5
Alrouji, M., Yasmin, S., Furkan, M., Alhumaydhi, F. A., Sharaf, S. E., Khan, R. H., & Shamsi, A. (2024) · Journal of Alzheimer s Disease · doi:10.3233/jad-240072 · Cited by 5
From Constructs to Crystals – Towards Structure Determination of β-barrel Outer Membrane Proteins
Noinaj, N., Mayclin, S. J., Stanley, A. M., Jao, C. C., & Buchanan, S. K. (2016) · Journal of Visualized Experiments · doi:10.3791/53245 · Cited by 5
Self-citationDuran, G. N., & Özbil, M. (2021) · TURKISH JOURNAL OF CHEMISTRY · doi:10.3906/kim-2102-25 · Cited by 5
Maurakis, S. A., Stoudenmire, J. L., Rymer, J. K., Chazin, W., & Cornelissen, C. N. (2022) · mBio · doi:10.1128/mbio.01670-22 · Cited by 4
Khan, M. S., Furkan, M., Shahwan, M. J., Yadav, D. K., Anwar, S., Khan, R. H., & Shamsi, A. (2023) · Amino Acids · doi:10.1007/s00726-023-03355-5 · Cited by 5
Atiya, A., Alsayari, A., Muhsinah, A. B., Almaghaslah, D., Bilgrami, A. L., Abdulmonem, W. A., Alorfi, N. M., DasGupta, D., Ashraf, G. M., Shamsi, A., et al. (2022) · Journal of Biomolecular Structure and Dynamics · doi:10.1080/07391102.2022.2143425 · Cited by 5
Holbein, B. E., Ang, M. T. C., Allan, D. S., Chen, W., & Lehmann, C. (2021) · Sustainable agriculture reviews · doi:10.1007/978-3-030-58259-3_8 · Cited by 5
Prigol, S. R., Klein, R. L., Chaudhuri, S., Frandoloso, G. C. P., Guizzo, J. A., Gutiérrez-Martín, C. B., Schryvers, A. B., Kreutz, L. C., & Frandoloso, R. (2022) · Pathogens · doi:10.3390/pathogens11070766 · Cited by 4
Advances in Computational Methods for Transmembrane Protein Structure Prediction
Nugent, T. C. O., Jones, D. T., & Hayat, S. (2017) · Springer eBooks · doi:10.1007/978-94-024-1069-3_5 · Cited by 4
Ethyl‐substituted Thioflavin T as a Fluorescent Probe for Detecting the Conformation of Transferrin
Fu, Y., Shi, L., Zhao, Z., Yang, D., Li, Q., Tang, Y., & Zhang, X. (2019) · ChemistrySelect · doi:10.1002/slct.201902327 · Cited by 3
Armstrong, S. K. (2015) · ASM Press eBooks · doi:10.1128/9781555818883.ch11 · Cited by 3
Indrakumar, S., Kulakova, A., Harris, P., & Peters, G. H. J. (2022) · Molecular Pharmaceutics · doi:10.1021/acs.molpharmaceut.2c00158 · Cited by 3
Alrouji, M., Furkan, M., Alnuaimi, G. R. H., Yasmin, S., Alhumaydhi, F. A., Khan, R. H., Shahwan, M. J., Anwar, S., Islam, A., & Shamsi, A. (2024) · International Journal of Biological Macromolecules · doi:10.1016/j.ijbiomac.2024.138829 · Cited by 3
Structural-stability studies on recombinant human transferrinPreprint
Kulakova, A., Indrakumar, S., Sønderby, P., Gentiluomo, L., Streicher, W. W., Roessner, D., Frieß, W., Peters, G. H. J., & Harris, P. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/742957 · Cited by 3
Metals and Mitochondria in Neurodegeneration
Plascencia‐Villa, G., José–Yacamán, M., & Perry, G. L. (2017) · Elsevier eBooks · doi:10.1016/b978-0-12-804562-6.00015-4 · Cited by 2
Roytrakul, S., Sangprasert, P., Jaresitthikunchai, J., Phaonakrop, N., & Arpornsuwan, T. (2023) · PLoS ONE · doi:10.1371/journal.pone.0289308 · Cited by 2
Tag-free protein modification by lipoate ligase A: exploring substrate tolerance
Yamazaki, S., Takahashi, K., & Matsuda, Y. (2024) · Analytical Sciences · doi:10.1007/s44211-024-00534-6 · Cited by 2
Wojnowska, M., & Walker, D. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/749960 · Cited by 2
Sprigg, W. A. (2025) · Extreme weather and society · doi:10.1007/978-3-031-77046-3_10 · Cited by 1
Structural insights into outer membrane protein biogenesis in pathogenic Neisseria
Billings, E., Fan, Z., Sooreshjani, M. A., Gumbart, J. C., & Noinaj, N. (2025) · Structure · doi:10.1016/j.str.2025.08.009 · Cited by 1
Self-citationA new family of TonB-dependent copper transporters linked to respiratory oxidase function
Hachmi, M., Mirgaux, M., Wintjens, R. T., Carassus, C., Arnoux, P., Roy, G., Rivera-Millot, A., Slupek, S., Debrie, A., Alaimo, V., et al. (2026) · Journal of Biological Chemistry · doi:10.1016/j.jbc.2026.111180 · Cited by 1
Pyne, A., Abduljalil, J. M. A., & Kwan, A. H. (2026) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2026.1842791 · Cited by 1
Hata, T., Shibata, Y., Okano, M., Kodera, A., Ueda, M., Iwamoto, H., Tomida, H., Iwamoto, H., & Hirose, J. (2015) · Biological and Pharmaceutical Bulletin · doi:10.1248/bpb.b13-00954 · Cited by 1
Diverse Protein-Folding Pathways and Functions of β-Hairpins and β-Sheets
Balusek, C., Hwang, H. J., Hazel, A. J., Lundquist, K. P., Pavlova, À., & Gumbart, J. C. (2018) · Springer eBooks · doi:10.1007/978-3-319-73975-5_1 · Cited by 1
Self-citationHow prevalent are lactoferrin receptors in Gram-negative bacteria?
Ewasechko, N. F., Curran, D. M., Khaw, K. Y., & Schryvers, A. B. (2025) · Biochemistry and Cell Biology · doi:10.1139/bcb-2024-0180 · Cited by 1
Djurović, A., Mrkalić, E., Milanović, Ž., Serafinović, M. Ć., Odović, J., Milovanovic, D. R., & Jelić, R. (2025) · Molecular Diversity · doi:10.1007/s11030-025-11233-3 · Cited by 1
Construction of basic logic gates based on rapid detection of transferrin conformations
Fu, Y., Shi, L., Yang, D., Liu, L., & Zhang, X. (2020) · Dyes and Pigments · doi:10.1016/j.dyepig.2020.108331 · Cited by 1
Mangani, S. (2013) · Springer eBooks · doi:10.1007/978-3-642-37999-4_5 · Cited by 1
Biological and Biomedical Aspects of Metal Phenolates
Ming, L. (2014) · Patai's chemistry of functional groups · doi:10.1002/9780470682531.pat0602 · Cited by 1
Mechanisms of antibiotic resistance and pathogenesis in Acinetobacter baumannii
Hood, M. I. (2012) · Cited by 1
Leveraging the Omics Revolution for Nontuberculous Mycobacteria Biomarkers
Chotirmall, S. H., & Aliberti, S. (2022) · CHEST Journal · doi:10.1016/j.chest.2021.12.646 · Cited by 1
Structural and Functional Studies on IroB: A Pathogen-Associated C-glycosyltransferase
Foshag, D. (2012) · Spectrum Research Repository (Concordia University)
Relative Mobility of Human Transferrin Domains Accounts for Its Efficient Recognition and RecyclingPreprint
Abdizadeh, H., Atılgan, A. R., & Atılgan, C. (2014) · arXiv (Cornell University) · doi:10.48550/arxiv.1411.5954
Mistry, S. (2013) · VCU Scholars Compass (Virginia Commonwealth University) · doi:10.25772/8zt6-1a88
Crichton, R. R. (2016) · Wiley eBooks · doi:10.1002/9781118925645.ch4
The Role of LbpB in Iron Acquisition and Cellular Defense in Neisseria meningitidis
Ostan, N. (2016) · Libraries and Cultural Resources (University of Calgary) · doi:10.11575/prism/28331
Investigating Surface Lipoprotein Translocation in Neisseria meningitidis
Judd, A. S. (2014) · TSpace (University of Toronto)
Liu, G. (2015) · Sabanci University
Crichton, R. R. (2016) · doi:10.1002/9781118925645.fmatter
Identification of a meningococcal adhesin that inhibits epithelial cell migration
Greig, G. (2020) · Open Access Victoria University of Wellington | Te Herenga Waka (Figshare) · doi:10.26686/wgtn.17144027
Dynamic topology-mediated maturation of β-barrel proteins in BAM-catalyzed foldingPreprint
Zhou, R., Xie, T., Chan, K., Pang, J., Shen, C., Chang, S., Buratto, D., Tang, X., Zhang, X., & Dong, H. (2023) · Research Square · doi:10.21203/rs.3.rs-3385498/v1
Torres-Escobar, A., Wilkins, A. A., Juárez-Rodríguez, M. D., Circu, M., Latimer, B., Dragoi, A., & Ivanov, S. (2024) · bioRxiv · doi:10.1101/2024.01.21.576562
Shamsi, A., Zain, N. N. M., Dinislam, K., Alzahrani, A. A., Khan, M. S., & Shahwan, M. J. (2025) · Scientific Reports · doi:10.1038/s41598-025-27571-z
Özdemir, C. D., Duran, G. N., Fındık, V., Özbil, M., & Erdem, S. S. (2025) · Inorganics · doi:10.3390/inorganics13120384
Iron Metabolism Disorders Associated With the Severity of Pyogenic Liver Abscess
Han, Z., Wu, Z., Zhou, H., Yao, T., Jiang, F., Ying, Y., Lu, M., Zhou, Z., Wang, Z., Shen, N., et al. (2025) · Food Science & Nutrition · doi:10.1002/fsn3.71195
Structural insights into zinc piracy by Neisseria gonorrhoeae to overcome nutritional immunity
Gheinani, P. T., Bera, A., Stoudenmire-Saylor, J., Lien, Y., Harrison, S. A., Criss, A., Chazin, W. J., Noinaj, N., & Cornelissen, C. N. (2025) · Structure · doi:10.1016/j.str.2025.11.014
Self-citationJaworski, I. (2012) · Spectrum Research Repository (Concordia University)
Investigation of the role of porin proteins in Salmonella acquisition of host iron
Alruways, M. W. (2019) · Figshare · doi:10.25392/leicester.data.10292567
Milanović, Ž., Mrkalić, E., Kulić, J., & Kaluđerović, G. N. (2026) · Materials · doi:10.3390/ma19030457
Milanović, Ž., Hmedat, A., Milisavljević, K. D., Mrkalić, E., Matić, J. D., Kosanić, M., & Kaluđerović, G. N. (2026) · Journal of Inorganic Biochemistry · doi:10.1016/j.jinorgbio.2026.113256
Ohno, S., Goto, Y., Manabe, N., & Yamaguchi, Y. (2026) · Glycobiology · doi:10.1093/glycob/cwag013
Role of the innate immune response in vascular damage caused by Neisseria meningitidis infection
Rojas, V. M. (2018) · theses.fr (ABES) · doi:10.70675/aa3bf510zf25ez4d6azb517z474dd4b94494
Structural insights into the mechanism underpinning iron piracy in pathogenic Neisseria
Dubey, S., Stoudenmire, J. L., Bury, G., Yang, L., Fan, Z., Li, P., Wadhwa, G., Pushkar, Y., Gumbart, J. C., Cornelissen, C. N., et al. (2026) · Science Advances · doi:10.1126/sciadv.aea2470
Self-citationMaladie parodontale, microbiote et fer
Boyer, É. (2019) · theses.fr (ABES) · doi:10.70675/3b7abb28zaa4ez4ab7z83e3z6a9e644dd83f
Molecular mechanism of haem acquisition from hemoglobin by Haemophilus influenzae
Tian, X. (2024) · theses.fr (ABES) · doi:10.70675/2705b108zdd87z4c3eza1daz0c115fa09109
Amić, A., Milanović, Ž., & Cagardová, D. (2026) · Antioxidants · doi:10.3390/antiox15060761
Bacterial Surfaces and Barriers: Biogenesis and Pathogen–Host Interactions
Bartholomew-Schoch, J., Finnie, J. K., Gahlmann, A., & Columbus, L. M. (2026) · Chemical Reviews · doi:10.1021/acs.chemrev.5c01068
Metadata
- Authors
- Noinaj, N., Easley, N. C., Oke, M., Mizuno, N., Gumbart, J., Boura, E., Steere, A. N., Zak, O., Aisen, P., Tajkhorshid, E., Evans, R. W., Gorringe, A. R., Mason, A. B., Steven, A. C., & Buchanan, S. K.
- Affiliations
- National Institutes of Health (US)
- Argonne National Laboratory (US)
- University of Vermont (US)
- Albert Einstein College of Medicine (US)
- University of Illinois Urbana-Champaign (US)
- Brunel University of London (GB)
- Health Protection Agency (GB)
- Corresponding author
- Buchanan, Susan K.
- ORCID
- Venue
- Nature
- Published
- 2012-02-12
- Volume
- 483
- Issue
- 7387
- Pages
- 53-58
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- PMC
- PMC3292680
- OpenAlex
- W2170163556
- Cited by
- 262
- References
- 54
- Citations by year
- 2026: 8 · 2025: 12 · 2024: 12 · 2023: 13 · 2022: 17 · 2021: 11 · 2020: 22 · 2019: 19 · 2018: 14 · 2017: 28 · 2016: 23 · 2015: 26 · 2014: 19 · 2013: 21 · 2012: 17
- FWCI
- 23.03
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- RePEc: Research Papers in Economics (submittedVersion)
- Funders
- National Institutes of Health
- National Institute of General Medical Sciences (P41GM104601, R01GM086749, U54GM087519)
- National Institute of Diabetes and Digestive and Kidney Diseases (R01 DK21739, ZIADK036143, R01DK021739)
- National Center for Research Resources (P41 RR-05969, P41RR005969)
- Topics
- Life Sciences › Immunology and Microbiology › Microbiology › Bacterial Infections and Vaccines
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Health Sciences › Medicine › Hematology › Iron Metabolism and Disorders
- Keywords
- Neisseria, iron acquisition, transferrin, TbpA, TbpB, outer membrane proteins, co-receptors, crystal structure, small-angle X-ray scattering, electron microscopy, vaccine targets, therapeutic target
- MeSH terms
- Animals, Apoproteins, Bacterial Proteins, Binding Sites, Biological Transport, Cattle, Humans, Iron, Models, Molecular, Neisseria, Protein Conformation, Species Specificity, Structure-Activity Relationship, Transferrin, X-Ray Diffraction, Crystallography, X-Ray, Transferrin-Binding Protein A, Transferrin-Binding Protein B, Mice, Scattering, Small Angle, Molecular Dynamics Simulation
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review