The DOI matches its Crossref record; 53 of the 53 references it cites were found in a registry or an index.
Molecular basis of nitrate uptake by the plant nitrate transporter NRT1.1
Open accessAbstract
The NRT1/PTR family of proton-coupled transporters are responsible for nitrogen assimilation in eukaryotes and bacteria through the uptake of peptides. However, in most plant species members of this family have evolved to transport nitrate as well as additional secondary metabolites and hormones. In response to falling nitrate levels, NRT1.1 is phosphorylated on an intracellular threonine that switches the transporter from a low-affinity to high-affinity state. Here we present both the apo and nitrate-bound crystal structures of Arabidopsis thaliana NRT1.1, which together with in vitro binding and transport data identify a key role for His 356 in nitrate binding. Our data support a model whereby phosphorylation increases structural flexibility and in turn the rate of transport. Comparison with peptide transporters further reveals how the NRT1/PTR family has evolved to recognize diverse nitrogenous ligands, while maintaining elements of a conserved coupling mechanism within this superfamily of nutrient transporters.
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The PyMOL Molecular Graphics System
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Kabsch, W. (2010) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444909047337 · Cited by 16,463
Jones, T. A., Zou, J. Y., Cowan, S. W., & Kjeldgaard, M. (1991) · Acta Crystallographica Section A Foundations of Crystallography · doi:10.1107/s0108767390010224 · Cited by 12,648
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Katoh, K., & Toh, H. (2008) · Briefings in Bioinformatics · doi:10.1093/bib/bbn013 · Cited by 3,586
The Jalview Java alignment editor
Clamp, M., Cuff, J., Searle, S. M., & Barton, G. J. (2004) · Bioinformatics · doi:10.1093/bioinformatics/btg430 · Cited by 1,580
An introduction to data reduction: space-group determination, scaling and intensity statistics
Evans, P. R. (2011) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s090744491003982x · Cited by 1,485
xia2: an expert system for macromolecular crystallography data reduction
Winter, G. (2010) · Journal of Applied Crystallography · doi:10.1107/s0021889809045701 · Cited by 1,413
Protein-binding assays in biological liquids using microscale thermophoresis
Wienken, C. J., Baaske, P., Rothbauer, U., Braun, D., & Duhr, S. (2010) · Nature Communications · doi:10.1038/ncomms1093 · Cited by 1,138
Methods used in the structure determination of bovine mitochondrial F1 ATPase
Abrahams, J. P., & Leslie, A. G. W. (1996) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444995008754 · Cited by 1,089
Experimental phasing with SHELXC/D/E: combining chain tracing with density modification
Sheldrick, G. M. (2010) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444909038360 · Cited by 1,089
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Metadata
- Authors
- Parker, J. L., & Newstead, S.
- Venue
- Nature
- Published
- 2014-02-26
- Volume
- 507
- Issue
- 7490
- Pages
- 68-72
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- OpenAlex
- W2002155693
- Cited by
- 408
- References
- 53
- FWCI
- 49.02
- Type
- journal article
- Language
- en
- Open access
- green
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