The DOI matches its Crossref record; 29 of the 29 references it cites were found in a registry or an index.
Genome sequencing identifies major causes of severe intellectual disability
Open accessAbstract
Severe intellectual disability (ID) occurs in 0.5% of newborns and is thought to be largely genetic in origin. The extensive genetic heterogeneity of this disorder requires a genome-wide detection of all types of genetic variation. Microarray studies and, more recently, exome sequencing have demonstrated the importance of de novo copy number variations (CNVs) and single-nucleotide variations (SNVs) in ID, but the majority of cases remain undiagnosed. Here we applied whole-genome sequencing to 50 patients with severe ID and their unaffected parents. All patients included had not received a molecular diagnosis after extensive genetic prescreening, including microarray-based CNV studies and exome sequencing. Notwithstanding this prescreening, 84 de novo SNVs affecting the coding region were identified, which showed a statistically significant enrichment of loss-of-function mutations as well as an enrichment for genes previously implicated in ID-related disorders. In addition, we identified eight de novo CNVs, including single-exon and intra-exonic deletions, as well as interchromosomal duplications. These CNVs affected known ID genes more frequently than expected. On the basis of diagnostic interpretation of all de novo variants, a conclusive genetic diagnosis was reached in 20 patients. Together with one compound heterozygous CNV causing disease in a recessive mode, this results in a diagnostic yield of 42% in this extensively studied cohort, and 62% as a cumulative estimate in an unselected cohort. These results suggest that de novo SNVs and CNVs affecting the coding region are a major cause of severe ID. Genome sequencing can be applied as a single genetic test to reliably identify and characterize the comprehensive spectrum of genetic variation, providing a genetic diagnosis in the majority of patients with severe ID.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Because of this bias, the phenotypic overlap between the groups is unclear; the prevalence of ASD in several of the ID/DD-ascertained cohorts is not quantified,13, 14, 15,18,19 and the prevalence of ID in the ASD-ascertained cohorts is known only for a minority subset of participants.11,12”
From Insufficient Evidence for “Autism-Specific” Genes (2020) · cites this paper as [18]
In the citing paper
“Various genetic approaches have been successful in identifying the causes of more than 1,000 Mendelian, and fewer non-Mendelian, forms of neurodevelopmental disorders: prototypical examples are intellectual disability62–68, autism spectrum disorder (ASD)69–77, epilepsy78,79 and schizophrenia80–82.”
From Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders (2015) · cites this paper as [68]
In the citing paper
“Additionally, whole-exome sequencing studies of other neurodevelopmental disorders have found enrichment for FMRP targets in rare mutations in schizophrenia81, intellectual disability68 and epilepsy78.”
From Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders (2015) · cites this paper as [68]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
An integrated encyclopedia of DNA elements in the human genome
The ENCODE Project Consortium (2012) · Nature · doi:10.1038/nature11247 · Cited by 18,072
Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations
O’Roak, B. J., Vives, L., Girirajan, S., Karakoc, E., Krumm, N., Coe, B. P., Levy, R., Ko, A., Lee, C., Smith, J. D., et al. (2012) · Nature · doi:10.1038/nature10989 · Cited by 2,165
Rate of de novo mutations and the importance of father’s age to disease risk
Kong, A., Frigge, M. L., Masson, G., Besenbacher, S., Sulem, P., Magnusson, G., Gudjonsson, S. A., Sigurdsson, A., Jonasdottir, A., Jonasdottir, A., et al. (2012) · Nature · doi:10.1038/nature11396 · Cited by 2,134
De novo mutations revealed by whole-exome sequencing are strongly associated with autism
Sanders, S. J., Murtha, M. T., Gupta, A. R., Murdoch, J. D., Raubeson, M. J., Willsey, A. J., Ercan-Sencicek, A. G., DiLullo, N. M., Parikshak, N. N., Stein, J. L., et al. (2012) · Nature · doi:10.1038/nature10945 · Cited by 2,084
Patterns and rates of exonic de novo mutations in autism spectrum disorders
Neale, B. M., Kou, Y., Liu, L., Ma’ayan, A., Samocha, K. E., Sabo, A., Lin, C.-F., Stevens, C., Wang, L.-S., Makarov, V., et al. (2012) · Nature · doi:10.1038/nature11011 · Cited by 1,734
Diagnostic exome sequencing in persons with severe intellectual disability
de Ligt, J., Willemsen, M. H., van Bon, B. W. M., Kleefstra, T., Yntema, H. G., Kroes, T., Vulto-van Silfhout, A. T., Koolen, D. A., de Vries, P., Gilissen, C., et al. (2012) · New England Journal of Medicine · doi:10.1056/nejmoa1206524 · Cited by 1,546
Self-citationDe novo mutations in epileptic encephalopathies
Epi4K Consortium, & Epilepsy Phenome/Genome Project (2013) · Nature · doi:10.1038/nature12439 · Cited by 1,514
De Novo Gene Disruptions in Children on the Autistic Spectrum
Iossifov, I., Ronemus, M., Levy, D., Wang, Z., Hakker, I., Rosenbaum, J., Yamrom, B., Lee, Y.-H., Narzisi, G., Leotta, A., et al. (2012) · Neuron · doi:10.1016/j.neuron.2012.04.009 · Cited by 1,446
A Systematic Survey of Loss-of-Function Variants in Human Protein-Coding Genes
MacArthur, D. G., Balasubramanian, S., Frankish, A., Huang, N., Morris, J., Walter, K., Jostins, L., Habegger, L., Pickrell, J. K., Montgomery, S. B., et al. (2012) · Science · doi:10.1126/science.1215040 · Cited by 1,272
Human Genome Sequencing Using Unchained Base Reads on Self-Assembling DNA Nanoarrays
Drmanac, R., Sparks, A. B., Callow, M. J., Halpern, A. L., Burns, N. L., Kermani, B. G., Carnevali, P., Nazarenko, I., Nilsen, G. B., Yeung, G., et al. (2010) · Science · doi:10.1126/science.1181498 · Cited by 1,212
Flagged first, then by citations
Research works printed but not linked: 1
- Bell, J. B. D., Sistermans, E. & Ramsden, S. C. Practice guidelines for the Interpretation and Reporting of Unclassified Variants (UVs) in Clinical Molecular Genetics (The UK Clinical Molecular Genetics Society and the Dutch Society of Clinical Genetic Laboratory Specialists, 2007)
Cited by
Sorted by citations
Items 601–700 of 1,001
Alu-Alu mediated intragenic duplications in IFT81 and MATN3 are associated with skeletal dysplasias
Pettersson, M., Vaz, R., Hammarsjö, A., Eisfeldt, J., Carvalho, C. M. B., Hofmeister, W., Tham, E., Horemuzova, E., Voss, U., Nishimura, G., et al. (2018) · Human Mutation · doi:10.1002/humu.23605 · Cited by 17
Song, C., Hong, Q., Geng, X., Wang, X., Wang, S., Cui, S., Guo, M., Li, O., Cai, G., Chen, X., et al. (2018) · Chinese Medical Journal · doi:10.4103/0366-6999.245158 · Cited by 16
PsyMuKB: An Integrative De Novo Variant Knowledge Base for Developmental Disorders
Lin, G. N., Guo, S., Xian, T., Wang, W., Qian, W., Song, W., Wang, J., Yu, S., Wang, Z., Cui, D., et al. (2019) · Genomics Proteomics & Bioinformatics · doi:10.1016/j.gpb.2019.10.002 · Cited by 16
Joint detection of copy number variations in parent-offspring trios
Liu, Y., Liu, J., Lü, J., Peng, J., Juan, L., Zhu, X., Li, B., & Wang, Y. (2015) · Bioinformatics · doi:10.1093/bioinformatics/btv707 · Cited by 16
Disruption of regulatory domains and novel transcripts as disease‐causing mechanisms
Allou, L., & Mundlos, S. (2023) · BioEssays · doi:10.1002/bies.202300010 · Cited by 15
Riquin, K., Isidor, B., Mercier, S., Nizon, M., Colin, E., Bonneau, D., Pasquier, L., Odent, S., Horn, X. L. G., Guyader, G. L., et al. (2023) · Journal of Medical Genetics · doi:10.1136/jmg-2023-109263 · Cited by 18
Fernandez, T. V., Williams, Z. P., Kline, T., Rajendran, S., Augustine, F., Wright, N. R. D., Sullivan, C. A. W., Olfson, E., Abdallah, S. B., Liu, W., et al. (2023) · PLoS ONE · doi:10.1371/journal.pone.0291978 · Cited by 15
Accelerating therapeutic development and clinical trial readiness for STXBP1 and SYNGAP1 disorders
Marotta, N., Boland, M. J., & Prosser, B. L. (2024) · Current problems in pediatric and adolescent health care · doi:10.1016/j.cppeds.2024.101576 · Cited by 15
Genetic screening and diagnosis in epilepsy?
Sisodiya, S. M. (2015) · Current Opinion in Neurology · doi:10.1097/wco.0000000000000180 · Cited by 16
Confirmation that variants in TTI2 are responsible for autosomal recessive intellectual disability
Ziegler, A. C., Bader, P. I., McWalter, K. M., Douglas, G., Houdayer, C., Bris, C., Rouleau, S., Coutant, R., Colin, E., & Bonneau, D. (2019) · Clinical Genetics · doi:10.1111/cge.13603 · Cited by 15
Rodríguez‐García, M. E., Cotrina‐Vinagre, F. J., Gómez‐Cano, M. Á., de Aragón, A. M., Martín‐Hernández, E., & Martínez‐Azorín, F. (2020) · American Journal of Medical Genetics Part A · doi:10.1002/ajmg.a.61560 · Cited by 15
Bioinformatics Analysis Revealed Novel 3′UTR Variants Associated with Intellectual Disability
Yang, J., Liu, A., He, I., & Bai, Y. (2020) · Genes · doi:10.3390/genes11090998 · Cited by 15
Murch, O., Jain, V., Benneche, A., Metcalfe, K., Hobson, E., Prescott, K., Chandler, K., Ghali, N., Carmichael, J., Foulds, N. C., et al. (2021) · European Journal of Human Genetics · doi:10.1038/s41431-021-00961-3 · Cited by 15
Willemsen, M. A. A. P., Harting, I., & Wevers, R. A. (2016) · Neurology Clinical Practice · doi:10.1212/cpj.0000000000000266 · Cited by 15
Self-citationDarvish, H., Azcona, L. J., Tafakhori, A., Ahmadi, M., Ahmadifard, A., & Paisán‐Ruiz, C. (2017) · npj Genomic Medicine · doi:10.1038/s41525-017-0022-7 · Cited by 15
Liao, L., Chen, C., Peng, J., Wu, L., He, F. P., Yang, L., Zhang, C., Wang, G., Peng, P., Ma, Y., et al. (2019) · Chinese Medical Journal · doi:10.1097/cm9.0000000000000295 · Cited by 16
Rahman, M. M., Uddin, K. M. F., Al‐Jezawi, N. K., Karuvantevida, N. S., Akter, H., Dity, N. J., Rahaman, M. A., Begum, M., Rahaman, A., Baqui, M. A., et al. (2019) · Molecular Genetics & Genomic Medicine · doi:10.1002/mgg3.954 · Cited by 15
Verhoeven, W. M. A., Egger, J. I. M., Knegt, A. C., Zuydam, J., & Kleefstra, T. (2016) · Neuropsychiatric Disease and Treatment · doi:10.2147/ndt.s102272 · Cited by 15
Self-citationFrom genes to genomes in the clinic
Veltman, J. A., & Lupski, J. R. (2015) · Genome Medicine · doi:10.1186/s13073-015-0200-0 · Cited by 15
Self-citationYi, Z., Zhang, Y., Song, Z., Pan, H., Yang, C., Li, F. R., Xue, J., & Qu, Z. (2020) · The Italian Journal of Pediatrics/Italian journal of pediatrics · doi:10.1186/s13052-020-00847-y · Cited by 14
Kurihara, Y., Mitsunari, K., Mukae, N., Shoji, H., Miyakawa, T., & Shirane, M. (2023) · Molecular Brain · doi:10.1186/s13041-023-01002-4 · Cited by 14
Martins, P. L. B., Torquato, G. C. P., Dias, G. A. P. F., Leite, I. B., GASPAR, T. M., Pinto, J. P., & Macêdo, D. S. (2024) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/j.pnpbp.2024.111089 · Cited by 14
Jiménez-Romero, M. S., Salas, P. C., & Benítez‐Burraco, A. (2018) · Molecular Syndromology · doi:10.1159/000485638 · Cited by 14
Pavlova, G. A., Popova, J. V., Andreyeva, E. N., Yarinich, L. A., Lebedev, M. O., Razuvaeva, A. V., Dubatolova, T. D., Oshchepkova, A. L., Pellacani, C., Somma, M. P., et al. (2019) · PLoS Genetics · doi:10.1371/journal.pgen.1008371 · Cited by 14
Technological Improvements in the Genetic Diagnosis of Rett Syndrome Spectrum Disorders
Xiol, C., Heredia, M. J. G., Pascual‐Alonso, A., Oyarzábal, A., & Armstrong, J. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms221910375 · Cited by 14
Two novel pathogenic variants in MED13L: one familial and one isolated case
Carvalho, L. M. L., da Costa, S. S., Campagnari, F., Kaufman, A., Bertola, D. R., da Silva, I. T., Krepischi, A. C. V., Koiffmann, C. P., & Rosenberg, C. (2021) · Journal of Intellectual Disability Research · doi:10.1111/jir.12891 · Cited by 14
Shankar, S. P., Grimsrud, K., Lanoue, L., Egense, A., Willis, B., Hörberg, J., AlAbdi, L., Mayer, K., Ütkür, K., Monaghan, K. G., et al. (2022) · Genetics in Medicine · doi:10.1016/j.gim.2022.03.014 · Cited by 14
Ng‐Cordell, E., Kolesnik, A., O’Brien, S., Astle, D. E., Scerif, G., & Baker, K. (2022) · Journal of Autism and Developmental Disorders · doi:10.1007/s10803-022-05527-w · Cited by 14
Chander, V., Mahmoud, M., Hu, J., Dardas, Z., Grochowski, C. M., Dawood, M., Khayat, M. M., Li, H., Li, S., Jhangiani, S. N., et al. (2022) · Human Mutation · doi:10.1002/humu.24461 · Cited by 14
Current trends of high-risk gene Cul3 in neurodevelopmental disorders
Lin, P., Yang, J., Wu, S., Ye, T., Zhuang, W., Wang, W., & Tan, T. (2023) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2023.1215110 · Cited by 14
Kumar, R., Ha, T., Pham, D., Shaw, M. A., Mangelsdorf, M., Friend, K. L., Hobson, L., TURNER, G. M., Boyle, J., Field, M. J., et al. (2016) · European Journal of Human Genetics · doi:10.1038/ejhg.2016.46 · Cited by 14
A domain-based DNA circuit for smart single-nucleotide variant identification
Zhong, W., Tang, W., Fan, J., Zhang, J., Zhou, X., & Liu, Y. (2017) · Chemical Communications · doi:10.1039/c7cc07733e · Cited by 14
Rodent genetic models of neurodevelopmental disorders and epilepsy
Gonzalez‐Sulser, A. (2019) · European Journal of Paediatric Neurology · doi:10.1016/j.ejpn.2019.12.012 · Cited by 16
Loss-of-function tolerance of enhancers in the human genome
Xu, D., Gökçümen, Ö., & Khurana, E. (2020) · PLoS Genetics · doi:10.1371/journal.pgen.1008663 · Cited by 14
Autism spectrum disorder genomics: The progress and potential of genomic technologies
Ghrálaigh, F. N., Gallagher, L., & Lopez, L. M. (2020) · Genomics · doi:10.1016/j.ygeno.2020.09.022 · Cited by 14
Albuquerque, A. L. B., dos Santos, G. G., Sadok, S. H., Antonello, B. B., de Jesus, L. M., Carvalho, M. O., Mutarelli², A. M., & Ribeiro, P. V. Z. (2025) · American Journal of Medical Genetics Part A · doi:10.1002/ajmg.a.64146 · Cited by 14
Jia, X., Zhu, J., Bian, X., Liu, S., Yu, S., Liang, W., Jiang, L., Mao, R., Zhang, W., & Rao, Y. (2023) · eLife · doi:10.7554/elife.86972 · Cited by 14
Somatic Mosaicism and Neurological Diseases
Jamuar, S. S., D’Gama, A. M., & Walsh, C. A. (2016) · Elsevier eBooks · doi:10.1016/b978-0-12-800105-9.00012-3 · Cited by 12
Shifting the focus toward rare variants in schizophrenia to close the gap from genotype to phenotype
Bustamante, M. L., Herrera, L., Gaspar, P. A., Nieto, R. R., Maturana, A., Villar, M. J., Salinas, V., & Hernán Silva, I. (2017) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.32550 · Cited by 13
Vrijenhoek, T., Tõnisson, N., Kääriäinen, H. A., Leitsalu, L., & Rigter, T. (2021) · Journal of Community Genetics · doi:10.1007/s12687-021-00514-7 · Cited by 13
Allington, G., Duy, P. Q., Ryou, J., Singh, A. K., Kiziltug, E., Robert, S. M., Kundishora, A. J., King, S. B., Haider, S. M., Kahle, K. T., et al. (2022) · Journal of Neurosurgery Pediatrics · doi:10.3171/2021.8.peds21368 · Cited by 13
Rath, M., Jenssen, S. E., Schwefel, K., Spiegler, S., Kleimeier, D., Sperling, C., Kaderali, L., & Felbor, U. (2017) · European Journal of Medical Genetics · doi:10.1016/j.ejmg.2017.06.007 · Cited by 13
Stress Odorant Sensory Response Dysfunction in Drosophila Fragile X Syndrome Mutants
Androschuk, A., He, R. X., Weber, S. M., Rosenfelt, C. S., & Bolduc, F. V. (2018) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2018.00242 · Cited by 13
Lacey, C. J., Doudney, K., Bridgman, P. G., George, P. M., Mulder, R., Zarifeh, J., Kimber, B., Cadzow, M. J., Black, M. A., Merriman, T. R., et al. (2018) · Scientific Reports · doi:10.1038/s41598-018-25827-5 · Cited by 13
Ben‐Mahmoud, A., Al-Shamsi, A. M., Ali, B. R., & Al‐Gazali, L. (2019) · Journal of Molecular Neuroscience · doi:10.1007/s12031-019-01415-8 · Cited by 13
Performance comparison: exome sequencing as a single test replacing Sanger sequencing
Fridman, H., Bormans, C. A., Einhorn, M., Au, D., Bormans, A., Porat, Y., Sanchez, L. F., Manning, B., Levy‐Lahad, E., & Behar, D. M. (2021) · Molecular Genetics and Genomics · doi:10.1007/s00438-021-01772-3 · Cited by 13
Goldmann, J. M., Hampstead, J. E., Wong, W. S. W., Wilfert, A. B., Turner, T. N., Jonker, M. A., Bernier, R., Huynen, M. A., Eichler, E. E., Veltman, J. A., et al. (2021) · Genome Research · doi:10.1101/gr.271809.120 · Cited by 13
Self-citationQian, S., Yang, Q., Cai, C., Dong, J., & Cai, S. (2024) · Brain Sciences · doi:10.3390/brainsci14050507 · Cited by 12
A cell type-aware framework for nominating non-coding variants in Mendelian regulatory disorders
Lee, A. S., Ayers, L. J., Kosicki, M., Chan, W. M., Fozo, L., Pratt, B. M., Collins, T. E., Zhao, B., Rose, M. F., Sanchis‐Juan, A., et al. (2024) · Nature Communications · doi:10.1038/s41467-024-52463-7 · Cited by 12
Critical points for an accurate human genome analysis
White, S. J., Laros, J. F. J., Bakker, E., Cambon‐Thomsen, A., Eden, M., Leonard, S., Lochmüller, H., Matthijs, G., Mattocks, C., Patton, S. J., et al. (2017) · Human Mutation · doi:10.1002/humu.23238 · Cited by 12
National human genome projects: an update and an agenda
An, J. (2017) · Epidemiology and Health · doi:10.4178/epih.e2017045 · Cited by 12
Prenatal diagnosis for de novo mutations: Experience from a tertiary center over a 10‐year period
Eyal, O., Berkenstadt, M., Reznik‐Wolf, H., Poran, H., Ziv‐Baran, T., Greenbaum, L., Yonath, H., & Pras, E. (2019) · Molecular Genetics & Genomic Medicine · doi:10.1002/mgg3.573 · Cited by 13
Accelerated implementation of FQSqueezer novel genomic compression method
Amich, M., Luca, P. D., & Fiscale, S. (2020) · International Symposium on Parallel and Distributed Computing · doi:10.1109/ispdc51135.2020.00030 · Cited by 12
Young, N., Asif, M., Jackson, M., Fernández-Mayoralas, D. M., de la Peña, M. J., Calleja‐Pérez, B., Álvarez, S., Hunter-Featherstone, E., Noegel, A. A., Höhne, W. E., et al. (2021) · Genes · doi:10.3390/genes12091294 · Cited by 12
DeepND: Deep multitask learning of gene risk for comorbid neurodevelopmental disorders
Beyreli, İ., Karakahya, O., & Çiçek, A. E. (2022) · Patterns · doi:10.1016/j.patter.2022.100524 · Cited by 13
Asif, M., Anayat, M., Tariq, F., Noureen, T., Din, G. N. U., Becker, C., Becker, K., Thiele, H., Makhdoom, E. U. H., Shaiq, P. A., et al. (2022) · Genes · doi:10.3390/genes14010048 · Cited by 12
Ibrahim, N., Naz, S., Mattioli, F., Guex, N., Sharif, S., Iqbal, A., Ansar, M., & Reymond, A. (2023) · Genes · doi:10.3390/genes14030707 · Cited by 12
Madrigal, I., Álvarez‐Mora, M. I., Rosell, J., Rodríguez‐Revenga, L., Karlberg, O., Sauer, S., Syvänen, A., & Milà, M. (2016) · European Journal of Human Genetics · doi:10.1038/ejhg.2015.267 · Cited by 12
Application of whole‐exome sequencing for detecting copy number variants in CMT1A/HNPP
Jo, H. Y., Park, M. ‐., Woo, H.-M., Han, M., Kim, B., Choi, B., Chung, K. W., & Koo, S. K. (2015) · Clinical Genetics · doi:10.1111/cge.12714 · Cited by 12
Carpanini, S. M., Wishart, T. M., Gillingwater, T. H., Manson, J. C., & SUMMERS, K. M. (2017) · Neurogenetics · doi:10.1007/s10048-017-0509-5 · Cited by 12
Future perspectives of genome-scale sequencing
Steyaert, W., Callens, S. F. J., Coucke, P. J., Dermaut, B., Hemelsoet, D., Terryn, W., & Poppe, B. G. (2018) · Acta Clinica Belgica · doi:10.1080/17843286.2017.1413809 · Cited by 12
Genetic Approach to Diagnosis of Intellectual Disability
Puri, R. D., Tuteja, M., & Verma, I. C. (2016) · The Indian Journal of Pediatrics · doi:10.1007/s12098-016-2205-0 · Cited by 12
Advanced Whole-Genome Sequencing and Analysis of Fetal Genomes from Amniotic Fluid
Mao, Q., Chin, R. G., Xie, W., Deng, Y., Zhang, W., Xu, H., Zhang, R. Y. U., Shi, Q., Peters, E. E., Gulbahce, N., et al. (2018) · Clinical Chemistry · doi:10.1373/clinchem.2017.281220 · Cited by 12
Clementz, B. A., Assaf, M., Sweeney, J. A., Gershon, E. S., Keedy, S., Hill, S. K., Ivleva, E. I., Tamminga, C. A., McDowell, J. E., Keshavan, M. S., et al. (2024) · Advances in neurobiology · doi:10.1007/978-3-031-69491-2_23 · Cited by 11
Prospects of Non-Coding Elements in Genomic DNA Based Gene Therapy
Simna, S. P., & Han, Z. (2021) · Current Gene Therapy · doi:10.2174/1566523221666210419090357 · Cited by 11
Hernández, A. V. M., Vila, M. T., Montoya-Filardi, A., Barranco-González, H., Vilchez, J. J., Azorı́n, I., Dura, P. S., Monfort, S., Castellano, I. P., & Martı́nez, F. (2021) · Clinical Genetics · doi:10.1111/cge.14093 · Cited by 11
Identification of a Novel SHANK2 Pathogenic Variant in a Patient with a Neurodevelopmental Disorder
Doddato, G., Fabbiani, A., Scandurra, V., Canitano, R., Mencarelli, M. A., Renieri, A., & Ariani, F. (2022) · Genes · doi:10.3390/genes13040688 · Cited by 11
Complex Diagnostics of Non-Specific Intellectual Developmental Disorder
Levchenko, O. A., Леонидовна, Д. Е., Бессонова, Л. А., Demina, N., Rudenskaya, G. E., Matyushchenko, G., Маркова, Т. В., Anisimova, I. V., Semenova, N. A., Shchagina, O., et al. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms23147764 · Cited by 11
Viard, J., Loe-Mie, Y., Daudin, R., Khelfaoui, M., Plançon, C., Boland, A., Tejedor, F. J., Huganir, R. L., Kim, E., Kinoshita, M., et al. (2022) · Life Science Alliance · doi:10.26508/lsa.202101205 · Cited by 12
100,000 genomes pilot on rare-disease diagnosis in health care – preliminary report
The Genomes-Project-Pilot-Investigators (2022) · Yearbook of pediatric endocrinology · doi:10.1530/ey.19.15.16 · Cited by 11
Deciphering Intellectual Disability
Gupta, N. (2022) · The Indian Journal of Pediatrics · doi:10.1007/s12098-022-04345-3 · Cited by 11
Schroeder, C., Faust, U., Krauße, L., Liebmann, A., Abele, M., Demidov, G. M., Schütz, L., Kelemen, O., Pohle, A., Gauß, S., et al. (2023) · European Journal of Human Genetics · doi:10.1038/s41431-023-01423-8 · Cited by 11
Gold, W. A., & Christodoulou, J. (2015) · Frontiers in Cellular Neuroscience · doi:10.3389/fncel.2015.00266 · Cited by 12
Zeroing in on the Genetics of Intelligence
Arslan, R. C., & Penke, L. (2015) · Journal of Intelligence · doi:10.3390/jintelligence3020041 · Cited by 11
A distinctive oral phenotype points to FAM 20A mutations not identified by S anger sequencing
Poulter, J. A., Smith, C. E. L., Murrillo, G., Silva, S., Feather, S. A., Howell, M., Crinnion, L. A., Bonthron, D. T., Carr, I., Watson, C. M., et al. (2015) · Molecular Genetics & Genomic Medicine · doi:10.1002/mgg3.164 · Cited by 11
Epileptic Encephalopathies as Neurodegenerative Disorders
Helbig, I., von Deimling, M., & Marsh, E. D. (2017) · Advances in neurobiology · doi:10.1007/978-3-319-57193-5_11 · Cited by 14
Genetic analysis of deep phenotyping projects in common disorders
Gershon, E. S., Pearlson, G. D., Keshavan, M. S., Tamminga, C. A., Clementz, B. A., Buckley, P. F., Alliey‐Rodriguez, N., Liu, C., Sweeney, J. A., Keedy, S., et al. (2017) · Schizophrenia Research · doi:10.1016/j.schres.2017.09.031 · Cited by 11
Exome sequencing reveals blended phenotype of double heterozygous FBN1 and FBN2 variants in a fetus
Aggarwal, S., Bhowmik, A. D., Tandon, A., & Dalal, A. B. (2018) · European Journal of Medical Genetics · doi:10.1016/j.ejmg.2018.02.009 · Cited by 11
Insights into National Laboratory Newborn Screening and Future Prospects
Mujamammi, A. H. (2022) · Medicina · doi:10.3390/medicina58020272 · Cited by 11
Kang, Y., Hyun, J., & Hwang, C. (2022) · Veterinary Dermatology · doi:10.1111/vde.13114 · Cited by 11
Explorations to improve the completeness of exome sequencing
Du, C., Pusey, B. N., Adams, C. J., Lau, C. C., Bone, W. P., Gahl, W. A., Markello, T. C., & Adams, D. R. (2016) · BMC Medical Genomics · doi:10.1186/s12920-016-0216-3 · Cited by 11
Cuinat, S., Bézieau, S., Deb, W., Mercier, S., Vignard, V., Isidor, B., Küry, S., & Ebstein, F. (2024) · Genes & Diseases · doi:10.1016/j.gendis.2023.101130 · Cited by 10
Lazcano-Ponce, E. C., Katz, G., Rodríguez‐Valentín, R., de Castro, F., Allen‐Leigh, B., Márquez-Caraveo, M. E., Ramírez-García, M. Á., Arroyo-García, E., Medina‐Mora, M. E., Angeles, G., et al. (2016) · Salud Pública de México · doi:10.21149/spm.v58i6.8267 · Cited by 10
Applications of genome sequencing as a single platform for clinical constitutional genetic testing
Yang, Y., del Gaudio, D., Santani, A., & Scott, S. A. (2024) · Genetics in Medicine Open · doi:10.1016/j.gimo.2024.101840 · Cited by 10
The genetic cause of neurodevelopmental disorders in 30 consanguineous families
Paracha, S. A., Nawaz, S., Sarwar, M. T., Shaheen, A., Zaman, G., Ahmed, J., Shah, F., Khawaja, S., Jan, A., Khan, N., et al. (2024) · Frontiers in Medicine · doi:10.3389/fmed.2024.1424753 · Cited by 10
Jiang, M., Yang, L., Wu, J., Xiong, F., & Li, J. (2021) · Translational Pediatrics · doi:10.21037/tp-21-206 · Cited by 10
Methods to Improve Molecular Diagnosis in Genomic Cold Cases in Pediatric Neurology
Kadlubowska, M. K., & Schrauwen, I. (2022) · Genes · doi:10.3390/genes13020333 · Cited by 12
Rigter, P. M. F., Wallaard, I., Jolfaei, M. A., Kingma, J., Post, L. C., Elgersma, M., Elgersma, Y., & van Woerden, G. M. (2022) · iScience · doi:10.1016/j.isci.2022.105303 · Cited by 10
Lecoquierre, F., Quenez, O., Fourneaux, S., Coutant, S., Vézain, M., Rolain, M., Drouot, N., Boland, A., Olaso, R., Meyer, V., et al. (2023) · Human Genetics · doi:10.1007/s00439-023-02553-1 · Cited by 10
Morgan, A., Gandin, I., Belcaro, C., Palumbo, P., Palumbo, O., Biamino, E., Col, V. D., Laurini, E., Pricl, S., Bosco, P., et al. (2015) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2015.09.002 · Cited by 10
A missense mutation underlies defective SOCS 4 function in a family with autoimmunity
Arts, P., Plantinga, T. S., van den Berg, J. M., Gilissen, C., Veltman, J. A., van Trotsenburg, A. S. P., van de Veerdonk, F. L., Kuijpers, T. W., Hoischen, A., & Netea, M. G. (2015) · Journal of Internal Medicine · doi:10.1111/joim.12351 · Cited by 10
Self-citationSzczałuba, K., & Demkow, U. A. (2016) · Journal of Applied Genetics · doi:10.1007/s13353-016-0376-z · Cited by 10
Searching for ancient balanced polymorphisms shared between Neanderthals and Modern Humans
Viscardi, L. H., Paixão‐Côrtes, V. R., Comas, D., Salzano, F. M., Rovaris, D. L., Bau, C. H. D., Amorim, C. E. G., & Bortolini, M. C. (2018) · Genetics and Molecular Biology · doi:10.1590/1678-4685-gmb-2017-0308 · Cited by 10
Netrin‐G2 dysfunction causes a Rett‐like phenotype with areflexia
Heimer, G., van Woerden, G. M., Barel, O., Marek‐Yagel, D., Kol, N., Munting, J. B., Borghei, M., Atawneh, O., Nissenkorn, A., Rechavi, G., et al. (2019) · Human Mutation · doi:10.1002/humu.23945 · Cited by 10
van der Made, C. I., Hoischen, A., Netea, M. G., & van de Veerdonk, F. L. (2020) · Immunological Reviews · doi:10.1111/imr.12898 · Cited by 10
Self-citationIdentification of thalassemia gene cluster deletion by long‐read whole‐genome sequencing (LR‐WGS)
Jiang, F., Lyu, G., Zhang, V. W., & Li, D. (2021) · International Journal of Laboratory Hematology · doi:10.1111/ijlh.13452 · Cited by 10
Hsu, J. S., So, M., Tang, C. S.-M., Karim, A., Porsch, R. M., Wong, C. W. Y., Yu, M., Yeung, F., Xia, H., Zhang, R., et al. (2017) · Human Molecular Genetics · doi:10.1093/hmg/ddx406 · Cited by 10
Loss of NSD2 causes dysregulation of synaptic genes and altered H3K36 dimethylation in mice
Kinoshita, S., Kojima, K., Ohnishi, E., Takayama, Y., Kikuchi, H., Takada, S., Nakabayashi, K., Kawai, T., & Hata, K. (2024) · Frontiers in Genetics · doi:10.3389/fgene.2024.1308234 · Cited by 9
Brkić, D., Ng‐Cordell, E., O’Brien, S., Scerif, G., Astle, D. E., & Baker, K. (2020) · Molecular Autism · doi:10.1186/s13229-020-00403-9 · Cited by 9
Park, J., Sturm, M., Kelemen, O., Ossowski, S., & Haack, T. B. (2024) · Genes · doi:10.3390/genes15010136 · Cited by 9
Metadata
- Authors
- Gilissen, C., Hehir-Kwa, J. Y., Thung, D. T., van de Vorst, M., van Bon, B. W. M., Willemsen, M. H., Kwint, M., Janssen, I. M., Hoischen, A., Schenck, A., Leach, R., Klein, R., Tearle, R., Bo, T., Pfundt, R., Yntema, H. G., de Vries, B. B. A., Kleefstra, T., Brunner, H. G., Vissers, L. E. L. M., & Veltman, J. A.
- Affiliations
- Radboud University Nijmegen (NL)
- Radboud University Medical Center (NL)
- Complete Genomics (United States) (US)
- Central South University (CN)
- Corresponding author
- Veltman, Joris A.
- ORCID
- Venue
- Nature
- Published
- 2014-06-04
- Volume
- 511
- Issue
- 7509
- Pages
- 344-347
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- OpenAlex
- W2045392412
- Cited by
- 1,125
- References
- 29
- Citations by year
- 2026: 30 · 2025: 45 · 2024: 50 · 2023: 74 · 2022: 93 · 2021: 87 · 2020: 102 · 2019: 115 · 2018: 122 · 2017: 129 · 2016: 137 · 2015: 110 · 2014: 28
- FWCI
- 88.22
- Type
- journal article
- Language
- en
- Open access
- Licence
- other-oa
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- Research Publications (Maastricht University) (acceptedVersion, other-oa)
- RePEc: Research Papers in Economics (submittedVersion)
- Adelaide Research & Scholarship (AR&S) (University of Adelaide) (submittedVersion)
- Radboud Repository (Radboud University) (submittedVersion)
- Radboud Repository (Radboud University) (submittedVersion, other-oa)
- Research Publications (Maastricht University) (submittedVersion)
- Newcastle University ePrints (Newcastle Univesity)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomics and Rare Diseases
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomic variations and chromosomal abnormalities
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
- Keywords
- severe intellectual disability, de novo copy number variation, loss-of-function mutations, whole genome sequencing, genetic diagnosis, diagnostic yield, recessive inheritance, undiagnosed genetic disorders
- MeSH terms
- Chromosomes, Human, Pair 4, Humans, Male, Intellectual Disability, Mutation, Cohort Studies, Genome, Human, Sequence Analysis, DNA, Gene Duplication, Polymorphism, Single Nucleotide, Guanine Nucleotide Exchange Factors, Chromosomes, Human, X, DNA Copy Number Variations
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review