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The heat released during catalytic turnover enhances the diffusion of an enzyme
Open accessAbstract
Recent studies have shown that the diffusivity of enzymes increases in a substrate-dependent manner during catalysis. Although this observation has been reported and characterized for several different systems, the precise origin of this phenomenon is unknown. Calorimetric methods are often used to determine enthalpies from enzyme-catalysed reactions and can therefore provide important insight into their reaction mechanisms. The ensemble averages involved in traditional bulk calorimetry cannot probe the transient effects that the energy exchanged in a reaction may have on the catalyst. Here we obtain single-molecule fluorescence correlation spectroscopy data and analyse them within the framework of a stochastic theory to demonstrate a mechanistic link between the enhanced diffusion of a single enzyme molecule and the heat released in the reaction. We propose that the heat released during catalysis generates an asymmetric pressure wave that results in a differential stress at the protein–solvent interface that transiently displaces the centre-of-mass of the enzyme (chemoacoustic effect). This novel perspective on how enzymes respond to the energy released during catalysis suggests a possible effect of the heat of reaction on the structural integrity and internal degrees of freedom of the enzyme.
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Cites
Thermodynamics of enzyme-catalyzed reactions--a database for quantitative biochemistry
Goldberg, R. N., Tewari, Y. B., & Bhat, T. N. (2004) · Bioinformatics · doi:10.1093/bioinformatics/bth314 · Cited by 191
Cited by
Norris, V., Krylov, S. N., Agarwal, P. K., & White, G. J. (2017) · Microbial Physiology · doi:10.1159/000464443 · Cited by 632
Materials learning from life: concepts for active, adaptive and autonomous molecular systems
Merindol, R., & Walther, A. (2017) · Chemical Society Reviews · doi:10.1039/c6cs00738d · Cited by 533
Sustained enzymatic activity and flow in crowded protein droplets
Testa, A., Dindo, M., Rebane, A. A., Nasouri, B., Style, R. W., Golestanian, R., Dufresne, E. R., & Laurino, P. (2021) · Nature Communications · doi:10.1038/s41467-021-26532-0 · Cited by 144
Metadata
- Authors
- Riedel, C., Gabizon, R., Wilson, C. A. M., Hamadani, K., Tsekouras, K., Marqusee, S., Pressé, S., & Bustamante, C.
- Venue
- Nature
- Published
- 2014-12-10
- Volume
- 517
- Issue
- 7533
- Pages
- 227-230
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- OpenAlex
- W2088306031
- Cited by
- 229
- References
- 1
- FWCI
- 9.50
- Type
- journal article
- Language
- en
- Open access
- bronze
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- Riedel, C., Gabizon, R., Wilson, C. A. M., Hamadani, K., Tsekouras, K., Marqusee, S., Pressé, S., & Bustamante, C. (2015). The heat released during catalytic turnover enhances the diffusion of an enzyme. Nature. https://doi.org/10.1038/nature14043
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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