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Quantitative exploration of the catalytic landscape separating divergent plant sesquiterpene synthases
Open accessAbstract
Throughout molecular evolution, organisms create assorted chemicals in response to varying ecological niches. Catalytic landscapes underlie metabolic evolution, wherein mutational steps alter the biosynthetic properties of enzymes. We report the first systematic quantitative characterization of a catalytic landscape underlying the evolution of sesquiterpene chemical diversity. Based on our previous discovery of a set of 9 naturally occurring amino acid substitutions that functionally inter-converted orthologous sesquiterpene synthases from Nicotiana tabaccum and Hyoscyamus muticus, we created a library of all possible residue combinations (29 = 512) in the N. tabaccum parent. The product spectra of 418 active enzymes to reveal a rugged landscape where several minimal combinations of the 9 mutations encode convergent solutions to the inter-conversions of parental activities. Quantitative comparisons indicate context dependence for mutational effects - epistasis - in product specificity and promiscuity. These results provide a measure of the mutational accessibility of phenotypic variability among a diverging lineage of terpene synthases.
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Cites
Plant sesquiterpenes induce hyphal branching in arbuscular mycorrhizal fungi
Akiyama, K., Matsuzaki, K.-I., & Hayashi, H. (2005) · Nature · doi:10.1038/nature03608 · Cited by 2,429
Robustness–epistasis link shapes the fitness landscape of a randomly drifting protein
Bershtein, S., Segal, M., Bekerman, R., Tokuriki, N., & Tawfik, D. S. (2006) · Nature · doi:10.1038/nature05385 · Cited by 414
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Chen, F., Tholl, D., Bohlmann, J., & Pichersky, E. (2011) · The Plant Journal · doi:10.1111/j.1365-313x.2011.04520.x · Cited by 1,446
Enzyme promiscuity: A mechanistic and evolutionary perspective
Tawfik, O. K. A. D. S. (2010) · Annual Review of Biochemistry · doi:10.1146/annurev-biochem-030409-143718 · Cited by 1,355
Empirical fitness landscapes and the predictability of evolution
de Visser, J. A. G. M., & Krug, J. (2014) · Nature Reviews Genetics · doi:10.1038/nrg3744 · Cited by 715
Mutational effects and the evolution of new protein functions
Soskine, M., & Tawfik, D. S. (2010) · Nature Reviews Genetics · doi:10.1038/nrg2808 · Cited by 454
Metadata
- Authors
- O'Maille, P. E., Malone, A., Dellas, N., Andes Hess, B., Smentek, L., Sheehan, I., Greenhagen, B. T., Chappell, J., Manning, G., & Noel, J. P.
- Venue
- Nature Chemical Biology
- Published
- 2008-09-07
- Volume
- 4
- Issue
- 10
- Pages
- 617-623
- ISSN
- 1552-4450 (ISSN-L)
- 1552-4469
- OpenAlex
- W2153650805
- Cited by
- 205
- References
- 2
- FWCI
- 5.46
- Type
- journal article
- Language
- en
- Open access
- green
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- O'Maille, P. E., Malone, A., Dellas, N., Andes Hess, B., Smentek, L., Sheehan, I., Greenhagen, B. T., Chappell, J., Manning, G., & Noel, J. P. (2008). Quantitative exploration of the catalytic landscape separating divergent plant sesquiterpene synthases. Nature Chemical Biology. https://doi.org/10.1038/nchembio.113
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