Quantum-chemical insights from deep tensor neural networks

Schütt, Kristof T., Arbabzadah, Farhad, Chmiela, Stefan, Müller, Klaus R., Tkatchenko, Alexandre·2017·Nature Communications

Cited by (1,001)

Items 101–200 of 1,001

  1. Machine Learning for Computational Heterogeneous Catalysis
    Philomena Schlexer, Kirsten T. Winther, José Antonio Garrido Torres, Verena Streibel, Meng Zhao, Michal Bajdich, Frank Abild‐Pedersen, Thomas Bligaard · 2019 · ChemCatChem
  2. Deep learning in drug discovery: opportunities, challenges and future prospects
    Lavecchia, Antonio · 2019 · Drug Discovery Today
  3. Crystal Structure Prediction via Deep Learning
    Kevin Ryan, Jeff Lengyel, Michael Shatruk · 2018 · Journal of the American Chemical Society
  4. SpookyNet: Learning force fields with electronic degrees of freedom and nonlocal effects
    Oliver T. Unke, Stefan Chmiela, Michael Gastegger, Kristof T. Schütt, Huziel E. Sauceda, Klaus‐Robert Müller · 2021 · Nature Communications
  5. Hierarchical modeling of molecular energies using a deep neural network
    Nicholas Lubbers, Justin S. Smith, Kipton M. Barros · 2018 · The Journal of Chemical Physics
  6. Machine Learning in Chemical Engineering: Strengths, Weaknesses, Opportunities, and Threats
    Maarten R. Dobbelaere, Pieter P. Plehiers, Ruben Van de Vijver, Christian V. Stevens, Kevin M. Van Geem · 2021 · Engineering
  7. Enhancing materials property prediction by leveraging computational and experimental data using deep transfer learning
    Dipendra Jha, Kamal Kumar Choudhary, Francesca Tavazza, Wei‐keng Liao, Alok Choudhary, Carelyn E. Campbell, Ankit Agrawal · 2019 · Nature Communications
  8. Developing an improved crystal graph convolutional neural network framework for accelerated materials discovery
    Cheol Woo Park, Chris Wolverton · 2020 · Physical Review Materials
  9. Deep Potential: A General Representation of a Many-Body Potential Energy Surface
    Jiequn Han, Linfeng Zhang, Roberto Car, Weinan E · 2018 · Communications in Computational Physics
  10. Intelligent nanophotonics: merging photonics and artificial intelligence at the nanoscale
    Kan Yao, Rohit Unni, Yuebing Zheng · 2018 · Nanophotonics
  11. Neural Network Potential Energy Surfaces for Small Molecules and Reactions
    Sergei Manzhos, Tucker Carrington · 2020 · Chemical Reviews
  12. Neural Network Potentials: A Concise Overview of Methods
    Emir Kocer, Tsz Wai Ko, Jörg Behler · 2022 · Annual Review of Physical Chemistry
  13. Unsupervised discovery of solid-state lithium ion conductors
    Ying Zhang, Xingfeng He, Zhiqian Chen, Qiang Bai, Adelaide M. Nolan, Charles A. Roberts, Debasish Banerjee, Tomoya Matsunaga, Yifei Mo, Chen Ling · 2019 · Nature Communications
  14. ANI-1, A data set of 20 million calculated off-equilibrium conformations for organic molecules
    Justin S. Smith, Olexandr Isayev, Adrián E. Roitberg · 2017 · Scientific Data
  15. Artificial Intelligence in Chemistry: Current Trends and Future Directions
    Zachary J. Baum, Xiang Yu, Philippe Y. Ayala, Yanan Zhao, Steven P. Watkins, Qiongqiong Angela Zhou · 2021 · Journal of Chemical Information and Modeling
  16. wACSF—Weighted atom-centered symmetry functions as descriptors in machine learning potentials
    Michael Gastegger, Ludwig Schwiedrzik, Marius R. Bittermann, Florian Berzsenyi, Philipp Marquetand · 2018 · The Journal of Chemical Physics
  17. Higher-Order Explanations of Graph Neural Networks via Relevant Walks
    Thomas Schnake, Oliver Eberle, Jonas Lederer, Shinichi Nakajima, Kristof T. Schütt, Klaus‐Robert Müller, Grégoire Montavon · 2021 · IEEE Transactions on Pattern Analysis and Machine Intelligence
  18. Complex reaction processes in combustion unraveled by neural network-based molecular dynamics simulation
    Jinzhe Zeng, Liqun Cao, Mingyuan Xu, Tong Zhu, John Z. H. Zhang · 2020 · Nature Communications
  19. The ANI-1ccx and ANI-1x data sets, coupled-cluster and density functional theory properties for molecules
    Justin S. Smith, R.I. Zubatyuk, Benjamin T. Nebgen, Nicholas Lubbers, Kipton M. Barros, Adrián E. Roitberg, Olexandr Isayev, Sergei Tretiak · 2020 · Scientific Data
  20. GraphAF: a Flow-based Autoregressive Model for Molecular Graph Generation
    Chence Shi, Minkai Xu, Zhaocheng Zhu, Weinan Zhang, Zhang, Ming, Jian Tang · 2020 · arXiv (Cornell University)
  21. Applying machine learning techniques to predict the properties of energetic materials
    Daniel C. Elton, Zois Boukouvalas, Mark S. Butrico, Mark Fuge, Peter W. Chung · 2018 · Scientific Reports
  22. Embedded Atom Neural Network Potentials: Efficient and Accurate Machine Learning with a Physically Inspired Representation
    Yaolong Zhang, Ce Hu, Bin Jiang · 2019 · The Journal of Physical Chemistry Letters
  23. Deep Learning-Based Weather Prediction: A Survey
    Xiaoli Ren, Xiaoyong Li, Kaijun Ren, Junqiang Song, Zichen Xu, Kefeng Deng, Xiang Wang · 2020 · Big Data Research
  24. Explaining the unique nature of individual gait patterns with deep learning
    Fabian Horst, Sebastian Lapuschkin, Wojciech Samek, Klaus-Robert Müller, Wolfgang Immanuel Schöllhorn · 2019 · Scientific Reports
  25. OrbNet: Deep learning for quantum chemistry using symmetry-adapted atomic-orbital features
    Zhuoran Qiao, Matthew Welborn, Animashree Anandkumar, Frederick R. Manby, Thomas F. Miller · 2020 · The Journal of Chemical Physics
  26. "What is relevant in a text document?": An interpretable machine learning approach
    Leila Arras, Franziska Horn, Grégoire Montavon, Klaus‐Robert Müller, Wojciech Samek · 2017 · PLoS ONE
  27. Deep Learning Spectroscopy: Neural Networks for Molecular Excitation Spectra
    Kunal Ghosh, Annika Stuke, Milica Todorović, Peter Bjørn Jørgensen, Mikkel Nørgaard Schmidt, Aki Vehtari, Patrick Rinke · 2019 · Advanced Science
  28. Uncovering Flooding Mechanisms Across the Contiguous United States Through Interpretive Deep Learning on Representative Catchments
    Shijie Jiang, Yi Zheng, Chao Wang, Vladan Babovic · 2021 · Water Resources Research
  29. A quantitative uncertainty metric controls error in neural network-driven chemical discovery
    Janet, Jon Paul, Duan, Chenru, Yang, Tzuhsiung, Nandy, Aditya, Kulik, Heather J. · 2019 · Chemical Science
  30. Scope of machine learning in materials research—A review
    Md Hosne Mobarak, Mariam Akter Mimona, Md. Aminul Islam, Nayem Hossain, Fatema Tuz Zohura, Ibnul Imtiaz, Md Israfil Hossain Rimon · 2023 · Applied Surface Science Advances
  31. A deep potential model with long-range electrostatic interactions
    Linfeng Zhang, Han Wang, Maria Carolina Muniz, Athanassios Z. Panagiotopoulos, Roberto Car, E Weinan · 2022 · The Journal of Chemical Physics
  32. Deep-learning density functional theory Hamiltonian for efficient ab initio electronic-structure calculation
    He Li, Zun Wang, Nianlong Zou, Meng Ye, Runzhang Xu, Xiaoxun Gong, Wenhui Duan, Yong Xu · 2022 · Nature Computational Science
  33. sGDML: Constructing accurate and data efficient molecular force fields using machine learning
    Stefan Chmiela, Huziel E. Sauceda, Igor Poltavsky, Klaus‐Robert Müller, Alexandre Tkatchenko · 2019 · Computer Physics Communications
  34. Quantum Machine Learning in Chemical Compound Space
    O. Anatole von Lilienfeld · 2017 · Angewandte Chemie International Edition
  35. Machine Learning Interatomic Potentials and Long-Range Physics
    Dylan M. Anstine, Olexandr Isayev · 2023 · The Journal of Physical Chemistry A
  36. Quantum machine learning using atom-in-molecule-based fragments selected on the fly
    Bing Huang, O. Anatole von Lilienfeld · 2020 · Nature Chemistry
  37. A practical guide to machine learning interatomic potentials – Status and future
    Ryan M. Jacobs, Dane D. Morgan, Siamak Attarian, Jun Meng, Chen Shen, Zhenghao Wu, Clare Yijia Xie, Julia H. Yang, Nongnuch Artrith, Ben J. Blaiszik et al. · 2025 · Current Opinion in Solid State and Materials Science
  38. Stress Field Prediction in Cantilevered Structures Using Convolutional Neural Networks
    Zhenguo Nie, Haoliang Jiang, Levent Burak Kara · 2019 · Journal of Computing and Information Science in Engineering
  39. 70 years of machine learning in geoscience in review
    Jesper Sören Dramsch · 2020 · Advances in geophysics
  40. Building attention and edge message passing neural networks for bioactivity and physical–chemical property prediction
    Michael Withnall, Edvard Lindelöf, Ola Engkvist, H. Chen · 2020 · Journal of Cheminformatics
  41. Molecular Imprinting: Materials Nanoarchitectonics with Molecular Information
    Makoto Komiyama, Taizo Mori, Katsuhiko Ariga · 2018 · Bulletin of the Chemical Society of Japan
  42. Deep Learning in Protein Structural Modeling and Design
    Gao, Wenhao, Mahajan, Sai Pooja, Sulam, Jeremias, Gray, Jeffrey J. · 2020 · Patterns
  43. Learning Molecular Representations for Medicinal Chemistry
    Kangway V. Chuang, Laura M. Gunsalus, Michael J. Keiser · 2020 · Journal of Medicinal Chemistry
  44. 70 years of machine learning in geoscience in review
    Jesper Sören Dramsch · 2020 · Technical University of Denmark, DTU Orbit (Technical University of Denmark, DTU)
  45. Machine learning potentials for complex aqueous systems made simple
    Christoph Schran, Fabian L. Thiemann, Patrick Rowe, Erich A. Müller, Ondřej Maršálek, Angelos Michaelides · 2021 · Proceedings of the National Academy of Sciences
  46. DeePCG: Constructing coarse-grained models via deep neural networks
    Linfeng Zhang, Jiequn Han, Han Wang, Roberto Car, Weinan E · 2018 · The Journal of Chemical Physics
  47. Machine Learning: Quantum vs Classical
    Tariq Mahmood Khan, Antonio Robles‐Kelly · 2020 · IEEE Access
  48. Transferability in Machine Learning for Electronic Structure via the Molecular Orbital Basis
    Matthew Welborn, Lixue Cheng, Thomas F. Miller · 2018 · Journal of Chemical Theory and Computation
  49. Machine Learning Force Fields and Coarse-Grained Variables in Molecular Dynamics: Application to Materials and Biological Systems
    Paraskevi Gkeka, Gabriel Stoltz, Amir Barati Farimani, Zineb Belkacemi, Michele Ceriotti, John D. Chodera, Aaron R. Dinner, Andrew L. Ferguson, Jean‐Bernard Maillet, Hervé Minoux et al. · 2020 · Journal of Chemical Theory and Computation
  50. Committee neural network potentials control generalization errors and enable active learning
    Christoph Schran, Kryštof Březina, Ondřej Maršálek · 2020 · The Journal of Chemical Physics
  51. Perspective on integrating machine learning into computational chemistry and materials science
    Julia Westermayr, Michael Gastegger, Kristof T. Schütt, Reinhard J. Maurer · 2021 · The Journal of Chemical Physics
  52. Coarse graining molecular dynamics with graph neural networks
    Brooke E. Husic, Nicholas E. Charron, Dominik Lemm, Jiang Wang, Adrià Pérez, Maciej Majewski, Andreas Krämer, Yaoyi Chen, Simon Olsson, Gianni De Fabritiis et al. · 2020 · The Journal of Chemical Physics
  53. Molecular Semiconductors for Logic Operations: Dead‐End or Bright Future?
    Guillaume Schweicher, Guillaume Garbay, Rémy Jouclas, François Vibert, Félix Devaux, Yves Henri Geerts · 2020 · Advanced Materials
  54. Machine learning in polymer informatics
    Wuxin Sha, Yan Li, Shun Tang, Jie Tian, Yuming Zhao, Yaqing Guo, Weixin Zhang, Xinfang Zhang, Songfeng Lu, Yuan‐Cheng Cao et al. · 2021 · InfoMat
  55. Ab Initio Machine Learning in Chemical Compound Space
    Bing Huang, O. Anatole von Lilienfeld · 2021 · Chemical Reviews
  56. Learning atoms for materials discovery
    Quan Zhou, Peizhe Tang, Shenxiu Liu, Jinbo Pan, Qimin Yan, Shoucheng Zhang · 2018 · Proceedings of the National Academy of Sciences
  57. Conditional Molecular Design with Deep Generative Models
    Seokho Kang, Kyunghyun Cho · 2018 · Journal of Chemical Information and Modeling
  58. Innovative Materials Science via Machine Learning
    Gao, Chaochao, Min, Xin, Fang, Minghao, Tao, Tianyi, Zheng, Xiaohong, Liu, Yangai, Wu, Xiaowen, Huang, Zhaohui · 2022 · Advanced Functional Materials
  59. Combining SchNet and SHARC: The SchNarc Machine Learning Approach for Excited-State Dynamics
    Julia Westermayr, Michael Gastegger, Philipp Marquetand · 2020 · The Journal of Physical Chemistry Letters
  60. Incompleteness of Atomic Structure Representations
    Sergey N. Pozdnyakov, Michael J. Willatt, Albert P. Bartók, Christoph Ortner, Gábor Cśanyi, Michele Ceriotti · 2020 · Physical Review Letters
  61. CLEVR-XAI: A benchmark dataset for the ground truth evaluation of neural network explanations
    Leila Arras, Ahmed Osman, Wojciech Samek · 2021 · Information Fusion
  62. Inverse design of 3d molecular structures with conditional generative neural networks
    Niklas W. A. Gebauer, Michael Gastegger, Stefaan S. P. Hessmann, Klaus‐Robert Müller, Kristof T. Schütt · 2022 · Nature Communications
  63. Data Generation for Machine Learning Interatomic Potentials and Beyond
    Maksim Kulichenko, Benjamin T. Nebgen, Nicholas Lubbers, Justin S. Smith, Kipton M. Barros, Alice E. A. Allen, Adela Habib, Emily Shinkle, Nikita S. Fedik, Ying Wai Li et al. · 2024 · Chemical Reviews
  64. SMILES2Vec: An Interpretable General-Purpose Deep Neural Network for Predicting Chemical Properties
    Garrett B. Goh, Nathan O. Hodas, Charles Siegel, Abhinav Vishnu · 2017 · arXiv (Cornell University)
  65. Computational prediction of chemical reactions: current status and outlook
    Ola Engkvist, Per‐Ola Norrby, Nidhal Selmi, Yu‐hong Lam, Zhengwei Peng, Edward C. Sherer, Willi Amberg, Thomas Erhard, Lynette A. Smyth · 2018 · Drug Discovery Today
  66. Molecular Property Prediction: A Multilevel Quantum Interactions Modeling Perspective
    Chengqiang Lu, Qi Liu, Chao Wang, Zhenya Huang, Peize Lin, Lixin He · 2019 · Proceedings of the AAAI Conference on Artificial Intelligence
  67. Machine Learning for Predicting the Band Gaps of ABX 3 Perovskites from Elemental Properties
    Vladislav Gladkikh, Dong Yeon Kim, Amir Hajibabaei, Atanu Jana, Chang Woo Myung, Kwang S. Kim · 2020 · The Journal of Physical Chemistry C
  68. Machine learning for chemical discovery
    Alexandre Tkatchenko · 2020 · Nature Communications
  69. Choosing the right molecular machine learning potential
    Max Pinheiro, Fuchun Ge, Nicolas Ferré, Pavlo O. Dral, Mario Barbatti · 2021 · Chemical Science
  70. Review of Pedestrian Trajectory Prediction Methods: Comparing Deep Learning and Knowledge-Based Approaches
    Raphael Korbmacher, Antoine Tordeux · 2022 · IEEE Transactions on Intelligent Transportation Systems
  71. Roadmap on Machine learning in electronic structure
    Heather J. Kulik, Thomas Hammerschmidt, Jonathan Schmidt, Silvana Botti, Miguel A. L. Marques, Mario Boley, Matthias Scheffler, Milica Todorović, Patrick Rinke, Corey Oses et al. · 2022 · Electronic Structure
  72. Accurate global machine learning force fields for molecules with hundreds of atoms
    Stefan Chmiela, Valentín Vassilev-Galindo, Oliver T. Unke, Adil Kabylda, Huziel E. Sauceda, Alexandre Tkatchenko, Klaus‐Robert Müller · 2023 · Science Advances
  73. DPA-2: a large atomic model as a multi-task learner
    Duo Zhang, Xinzijian Liu, Xiangyu Zhang, Chengqian Zhang, Chun Cai, Hangrui Bi, Yiming Du, Xuejian Qin, Anyang Peng, Jiameng Huang et al. · 2024 · npj Computational Materials
  74. Machine-learned multi-system surrogate models for materials prediction
    Chandramouli Nyshadham, Matthias Rupp, Brayden Bekker, Alexander V. Shapeev, Tim Mueller, Conrad W. Rosenbrock, Gábor Cśanyi, David Wingate, Gus L. W. Hart · 2019 · npj Computational Materials
  75. Non-covalent interactions across organic and biological subsets of chemical space: Physics-based potentials parametrized from machine learning
    Tristan Bereau, Robert A. DiStasio, Alexandre Tkatchenko, O. Anatole von Lilienfeld · 2018 · The Journal of Chemical Physics
  76. Combining electronic and structural features in machine learning models to predict organic solar cells properties
    Daniele Padula, Jack D. Simpson, Alessandro Troisi · 2018 · Materials Horizons
  77. Machine learning of solvent effects on molecular spectra and reactions
    Michael Gastegger, Kristof T. Schütt, Klaus‐Robert Müller · 2021 · Chemical Science
  78. Molecule Attention Transformer
    Łukasz Maziarka, Tomasz Danel, Sławomir Mucha, Krzysztof Rataj, Jacek Tabor, Stanisław Jastrzȩbski · 2020 · arXiv (Cornell University)
  79. Machine learning dihydrogen activation in the chemical space surrounding Vaska's complex
    Friederich, Pascal, dos Passos Gomes, Gabriel, De Bin, Riccardo, Aspuru-Guzik, Alán, Balcells, David · 2020 · Chemical Science
  80. Deep learning and the Schrödinger equation
    Kyle Mills, Michael Spanner, Isaac Tamblyn · 2017 · Physical Review A
  81. Machine learning of molecular properties: Locality and active learning
    Konstantin Gubaev, Evgeny V. Podryabinkin, Alexander V. Shapeev · 2018 · The Journal of Chemical Physics
  82. End-to-end Symmetry Preserving Inter-atomic Potential Energy Model for Finite and Extended Systems
    Linfeng Zhang, Jiequn Han, Han Wang, Wissam Abdo Saidi, Roberto Car, E Weinan · 2018 · arXiv (Cornell University)
  83. Recent advances in machine learning towards multiscale soft materials design
    Nicholas E. Jackson, Michael A. Webb, Juan Pablo · 2019 · Current Opinion in Chemical Engineering
  84. Molecular design in drug discovery: a comprehensive review of deep generative models
    Yu Cheng, Yongshun Gong, Yuansheng Liu, Bosheng Song, Quan Zou · 2021 · Briefings in Bioinformatics
  85. Inclusion of Machine Learning Kernel Ridge Regression Potential Energy Surfaces in On-the-Fly Nonadiabatic Molecular Dynamics Simulation
    Deping Hu, Yu Yang Xie, Xusong Li, Lingyue Li, Zhenggang Lan · 2018 · The Journal of Physical Chemistry Letters
  86. Message Passing Neural Networks
    Justin Gilmer, Samuel S. Schoenholz, Patrick F. Riley, Oriol Vinyals, George E. Dahl · 2020 · Lecture notes in physics
  87. Graph neural networks for an accurate and interpretable prediction of the properties of polycrystalline materials
    Minyi Dai, Mehmet F. Demirel, Yingyu Liang, Jia-Mian Hu · 2021 · npj Computational Materials
  88. Applications of Artificial Intelligence and Machine Learning Algorithms to Crystallization
    Christos Xiouras, Fabio Cameli, Gustavo Lunardon Quilló, Michail E. Kavousanakis, Dionisios G. Vlachos, Georgios D. Stefanidis · 2022 · Chemical Reviews
  89. Machine learning interatomic potential: Bridge the gap between small-scale models and realistic device-scale simulations
    Guanjie Wang, Changrui Wang, Xuanguang Zhang, Zefeng Li, Jian Zhou, Zhimei Sun · 2024 · iScience
  90. DPA-2: a large atomic model as a multi-task learner
    Zhang, Duo, Liu, Xinzijian, Zhang, Xiangyu, Zhang, Chengqian, Cai, Chun, Bi, Hangrui, Du, Yiming, Qin, Xuejian, Peng, Anyang, Huang, Jiameng et al. · 2023 · arXiv
  91. QM7-X, a comprehensive dataset of quantum-mechanical properties spanning the chemical space of small organic molecules
    Johannes Hoja, Leonardo Medrano Sandonas, Brian G. Ernst, Álvaro Vázquez‐Mayagoitia, Robert A. DiStasio, Alexandre Tkatchenko · 2021 · Scientific Data
  92. Development of Multimodal Machine Learning Potentials: Toward a Physics-Aware Artificial Intelligence
    Tetiana A. Zubatiuk, Olexandr Isayev · 2021 · Accounts of Chemical Research
  93. Accurate and scalable graph neural network force field and molecular dynamics with direct force architecture
    Cheol Woo Park, Mordechai Kornbluth, Jonathan Vandermause, Chris M. Wolverton, Boris Kozinsky, Jonathan P. Mailoa · 2021 · npj Computational Materials
  94. Structure-based sampling and self-correcting machine learning for accurate calculations of potential energy surfaces and vibrational levels
    Pavlo O. Dral, Alec Owens, Sergei N. Yurchenko, Walter Thiel · 2017 · The Journal of Chemical Physics
  95. Motif-based Graph Self-Supervised Learning for Molecular Property Prediction
    Zaixi Zhang, Qi Liu, Hao Wang, Chengqiang Lu, Chee‐Kong Lee · 2021 · arXiv (Cornell University)
  96. Low rank tensor completion for multiway visual data
    Zhen Long, Yipeng Liu, Longxi Chen, Ce Zhu · 2018 · Signal Processing
  97. Representations of molecules and materials for interpolation of quantum-mechanical simulations via machine learning
    Marcel F. Langer, Alex Goeßmann, Matthias Rupp · 2022 · npj Computational Materials
  98. JAX, M.D. A framework for differentiable physics*
    Samuel S. Schoenholz, Ekin D. Cubuk · 2021 · Journal of Statistical Mechanics Theory and Experiment
  99. Atomistic modeling of the mechanical properties: the rise of machine learning interatomic potentials
    Bohayra Mortazavi, Xiaoying Zhuang, Timon Rabczuk, Alexander V. Shapeev · 2023 · Materials Horizons
  100. Message-passing neural networks for high-throughput polymer screening
    Peter C. St. John, Caleb T. Phillips, Travis W. Kemper, A. Nolan Wilson, Yanfei Guan, Michael F. Crowley, Mark R. Nimlos, Ross E. Larsen · 2019 · The Journal of Chemical Physics