Detection of sharing by descent, long-range phasing and haplotype imputation
Kong, Augustine, Masson, Gisli, Frigge, Michael L, Gylfason, Arnaldur, Zusmanovich, Pasha, Thorleifsson, Gudmar, Olason, Pall I, Ingason, Andres, Steinberg, Stacy, Rafnar, Thorunn, Sulem, Patrick, Mouy, Magali, Jonsson, Frosti, Thorsteinsdottir, Unnur, Gudbjartsson, Daniel F, Stefansson, Hreinn, Stefansson, Kari·2008·Nature Genetics
DOI 10.1038/ng.216
Cited by (447)
Items 301–400 of 447
- Genome-wide association study on 13 167 individuals identifies regulators of blood CD34+cell levelsAitzkoa Lopez de Lapuente Portilla, Ludvig Ekdahl, Caterina Cafaro, Zain Ali, Natsumi Miharada, Guðmar Þorleifsson, Kristijonas Žemaitis, Antton Lamarca Arrizabalaga, Malte Thodberg, Maroulio Pertesi et al. · 2022 · Blood
- Atlas of Cryptic Genetic Relatedness Among 1000 Human GenomesLarisa V. Fedorova, Shuhao Qiu, Rajib Kumar Dutta, Alexei Fedorov · 2016 · Genome Biology and Evolution
- HLA alleles, disease severity, and age associate with T-cell responses following infection with SARS-CoV-2Thorunn Asta Olafsdottir, Kristbjörg Bjarnadóttir, Gudmundur Logi Norddahl, Gisli Hreinn Halldorsson, Páll Melsted, Kristbjörg Gunnarsdóttir, Erna V. Ivarsdottir, Þórhildur Ólafsdóttir, Asgeir Orn Arnthorsson, Fannar Theódórs et al. · 2022 · Communications Biology
- The recombination landscape of the barn owl, from families to populationsAlexandros Topaloudis, Tristan Cumer, Eléonore Lavanchy, Anne‐Lyse Ducrest, Céline Simon, Ana Paula Machado, Nika Paposhvili, Alexandre Roulin, Jérôme Goudet · 2024 · Genetics
- A population-based survey of FBN1 variants in Iceland reveals underdiagnosis of Marfan syndromeElín Óla Klemenzdóttir, Gudny Anna Arnadottir, Brynjar Ö. Jensson, Aðalbjörg Jónasdóttir, Hildigunnur Katrínardóttir, Rún Friðriksdóttir, Áslaug Jónasdóttir, Ásgeir Sigurðsson, Sigurjon Axel Gudjonsson, Jón J. Jónsson et al. · 2023 · European Journal of Human Genetics
- Haplotype-based membership inference from summary genomic dataDiyue Bu, Xiaofeng Wang, Haixu Tang · 2021 · Bioinformatics
- A Two-Stage Approximation for Analysis of Mixture Genetic Models in Large PedigreesDavid Habier, Liviu Radu Totir, Rohan L. Fernando · 2010 · Genetics
- Sequence variants influencing the regulation of serum IgG subclass levelsThorunn Asta Olafsdottir, Guðmar Þorleifsson, Aitzkoa Lopez de Lapuente Portilla, Stefan Jonsson, Lilja Stefánsdóttir, Abhishek Niroula, Áslaug Jónasdóttir, Hannes P. Eggertsson, Gisli Hreinn Halldorsson, Guðný Ella Thorlacius et al. · 2024 · Nature Communications
- Polygenic Interactions With Environmental Exposures in Blood Pressure Regulation: The HUNT StudyKarsten Øvretveit, Emma Ingeström, Michail Spitieris, Vinicius Tragante, Laurent F. Thomas, Ingelin Steinsland, Ben Michael Brumpton, Daniel Fannar Gudbjartsson, Hilma Hólm, Kāri Stefánsson et al. · 2024 · Journal of the American Heart Association
- Rare variant associations with birth weight identify genes involved in adipose tissue regulation, placental function and insulin-like growth factor signallingKatherine A. Kentistou, Brandon E. M. Lim, Lena R Kaisinger, Valgerður Steinthórsdóttir, Luke N Sharp, Kashyap Amratlal Patel, Vinicius Tragante, Gareth Hawkes, Eugene J. Gardner, Þórhildur Ólafsdóttir et al. · 2025 · Nature Communications
- The genetic architecture of fibromyalgia across 2.5 million individualsIsabel Kerrebijn, Gyða Björnsdóttir, Keon Arbabi, Lea Urpa, Hele Haapaniemi, Guðmar Þorleifsson, Lilja Stefánsdóttir, Stephan G. Frangakis, Jesse Valliere, Lovemore Kunorozva et al. · 2026 · Nature Medicine
- Chromosome-Range Whole-Genome High-Throughput Experimental Haplotyping by Single-Chromosome MicrodissectionLi Ma, Wenzhi Li, Qing Song · 2017 · Methods in molecular biology
- Genetic propensities for verbal and spatial ability have opposite effects on body mass index and risk of schizophreniaGuðrún A. Jónsdóttir, Guðmundur Einarsson, Guðmar Þorleifsson, Sigurður H. Magnússon, Arni F. Gunnarsson, Michael L. Frigge, Rósa S. Gísladóttir, Unnur Unnsteinsdóttir, Bjarni Gunnarsson, G. Bragi Walters et al. · 2021 · Intelligence
- Accurate genome-wide phasing from IBD dataKeith Noto, Luong Ruiz · 2022 · BMC Bioinformatics
- Pedigree-Free Descent-Based Gene Mapping from Population SamplesChris Glazner, E. A. Thompson · 2015 · Human Heredity
- Use of haplotypes to identify regions harbouring lethal recessive variants in pigsDavid M. Howard, Ricardo Pong‐Wong, Pieter W. Knap, John Arthur Woolliams · 2017 · Genetics Selection Evolution
- Supervised Classification of CYP2D6 Genotype and Metabolizer Phenotype With Postmortem Tramadol-Exposed FinnsFrank R. Wendt, Nicole M.M. Novroski, Anna‐Liina Rahikainen, Antti Sajantila, Bruce Budowle · 2018 · American Journal of Forensic Medicine & Pathology
- HLA Haplotypes In 250 Families: The Baylor Laboratory Results And A Perspective On A Core NGS Testing Model For The 17th International HLA And Immunogenetics WorkshopMedhat Z. Askar, Abeer S. Madbouly, Leah Zhrebker, Amanda Willis, Shawna Kennedy, Karin Padrós, Maria Beatriz Rodriguez, Christian Bach, Bernd M. Spriewald, Reem M. Ameen et al. · 2019 · Human Immunology
- The role of genomics in pig improvementDorian J. Garrick · 2017 · Animal Production Science
- Multi-ancestry GWAS deciphers genetic architecture of abdominal aortic aneurysm and highlights PCSK9 as a therapeutic targetTanmoy Roychowdhury, Derek M. Klarin, Michael G. Levin, Joshua Michael Spin, Yae Hyun Rhee, Alicia C. Deng, Colwyn Ansel Headley, Ida L. Surakka, Noah L. Tsao, Corry Gellatly et al. · 2022 · medRxiv
- Advances in haplotype phasing and genotype imputationQuan Sun, Yun Li · 2025 · Nature Reviews Genetics
- Sequence variant affects GCSAML splicing, mast cell specific proteins, and risk of urticariaRagnar P. Kristjansson, Gudjon R. Oskarsson, Ástrós Skúladóttir, Ásmundur Oddsson, Sölvi Rögnvaldsson, Garðar Sveinbjörnsson, Sigrún H. Lund, Brynjar Ö. Jensson, Edda L. Styrmisdottir, Gisli Hreinn Halldorsson et al. · 2023 · Communications Biology
- HaploShare: identification of extended haplotypes shared by cases and evaluation against controlsDingge Ying, Pak Chung Sham, David Keith Smith, Lu Zhang, YL Lau, Wanling Yang · 2015 · Genome biology
- Phasing and imputation of single nucleotide polymorphism data of missing parents of biparental plant populationsSerap Gonen, Valentin Wimmer, R. Chris Gaynor, Ed Byrne, Gregor Gorjanc, John M. Hickey · 2020 · Crop Science
- A maternal germline mutator phenotype in a family affected by heritable colorectal cancerCandice Young, Annabel C. Beichman, David Mas-Ponte, Shelby L. Hemker, Luke Zhu, Jacob Otto Kitzman, Brian H. Shirts, Kelley Harris · 2024 · Genetics
- The Clark Phase-able Sample Size Problem: Long-Range Phasing and Loss of Heterozygosity in GWASBjarni V. Halldórsson, Derek Aguiar, Ryan Tarpine, Sorin Istrail · 2010 · Lecture notes in computer science
- Haplotype sharing test maps genes for familial cardiomyopathies†P. van der Zwaag, J. Peter van Tintelen, Frans Gerbens, Jan D.H. Jongbloed, Ludolf G. Boven, Jasper J. van der Smagt, Wilma P. van der Roest, Irene M. van Langen, Hennie Bikker, Richard N.W. Hauer et al. · 2010 · Clinical Genetics
- Indications for Potential Parent-of-Origin Effects within the FTO GeneXuanshi Liu, Anke Hinney, Markus R. Scholz, André Scherag, Anke Tönjes, Michael Stümvoll, Peter Florian Stadler, Johannes Hebebrand, Yvonne Böttcher · 2015 · PLoS ONE
- Highly Accurate and Efficient Data-Driven Methods for Genotype ImputationOlivia Choudhury, Ankush Chakrabarty, Scott Emrich · 2017 · IEEE Transactions on Computational Biology and Bioinformatics
- Genotype phasing in pedigrees using whole-genome sequence dataAugust N. Blackburn, Lucy Blondell, Mark Z. Kos, Nicholas B. Blackburn, Juan M. Peralta, P. Stevens, Donna M. Lehman, John Blangero, Harald H.H. Göring · 2020 · European Journal of Human Genetics
- Genome-wide association study provides new insights into the genetic architecture and pathogenesis of heart failureSonia H Shah, Albert Henry, Carolina Roselli, Honghuang Lin, Garðar Sveinbjörnsson, Ghazaleh Fatemifar, Åsa K. Hedman, Jemma B. Wilk, Michael P. Morley, Mark D. Chaffin et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
- Deltapine 15 contributes to the genomic architecture of modern upland cotton cultivarsYingfei Liu, Mian Faisal Nazir, Shoupu He, Hongge Li, Zhaoe Pan, Gaofei Sun, Panhong Dai, Liyuan Wang, Xiongming Du · 2022 · Theoretical and Applied Genetics
- Universal tumor screening in a population with MSH6- and PMS2-associated Lynch syndromeHaukur Einarsson, Johanna Run Runarsdottir, Thordur Tryggvason, Pétur Snæbjörnsson, Agnes Smáradóttir, Vigdís Stefánsdóttir, Ásgeir Thoroddsen, Reynir Arngrı́msson, Jon Gunnlaugur Jonasson, Sigurdís Haraldsdóttir · 2022 · Genetics in Medicine
- Thirty novel sequence variants impacting human intracranial volumeMuhammad Sulaman Nawaz, Guðmundur Einarsson, Mariana Bustamante, Rósa S. Gísladóttir, G. Bragi Walters, Guðrún A. Jónsdóttir, Ástrós Skúladóttir, Gyða Björnsdóttir, Sigurður H. Magnússon, Bergrún Ásbjörnsdóttir et al. · 2022 · Brain Communications
- Robust physical methods that enrich genomic regions identical by descent for linkage studies: confirmation of a locus for osteogenesis imperfectaPeter Brooks, Charles Marcaillou, Maud Vanpeene, Jean‐Paul Saraiva, Daniel Stockholm, Stephan Francke, Reyna Favis, Nadine Cohen, Francis Rousseau, Frédéric Torès et al. · 2009 · BMC Genetics
- The use of genomic data and imputation methods in dairy cattle breedingAnita Klímová, Eva Kašná, Karolína Machová, Michaela Brzáková, Josef Přibyl, Luboš VOSTRÝ · 2020 · Czech Journal of Animal Science
- Evaluation of Four Forensic Investigative Genetic Genealogy Analysis Approaches with Decreased Numbers of SNPs and Increased Genotyping ErrorsYu Zang, Enlin Wu, Tingjun Li, Jiajun Liu, Riga Wu, Ran Li, Hongyu Sun · 2024 · Genes
- Realizing the full potential of Our Future Health through data linkage and trans-biobank effortsVincent John Straub, Stefania Benónísdóttir, Augustine Kong, Melinda C Mills · 2025 · Nature Genetics
- Off the street phasing (OTSP): no hassle haplotype phasing for molecular PGD applicationsDavid A. Zeevi, Fouad Zahdeh, Yehuda Kling, Shai Carmi, Gheona Altarescu · 2019 · Journal of Assisted Reproduction and Genetics
- Sequence variants associated with BMI affect disease risk through BMI itselfGuðmundur Einarsson, Guðmar Þorleifsson, Valgerður Steinthórsdóttir, Florian Zink, Hannes Helgason, Þórhildur Ólafsdóttir, Sölvi Rögnvaldsson, Vinicius Tragante, Magnus Orn Ulfarsson, Garðar Sveinbjörnsson et al. · 2024 · Nature Communications
- Haplotype phasing after joint estimation of recombination and linkage disequilibrium in breeding populationsLuis Gomez‐Raya, Amanda M. Hulse‐Kemp, David S. Thain, Wendy M. Rauw · 2013 · Journal of Animal Science and Biotechnology/Journal of animal science and biotechnology
- Pharmacogenomics: accessing important alleles by imputation from commercial genome-wide SNP arraysRaquel Liboredo, Sérgio D.J. Pena · 2014 · Genetics and Molecular Research
- Kinpute: using identity by descent to improve genotype imputationMark Abney, Aisha ElSherbiny · 2019 · Bioinformatics
- Sequence variants in malignant hyperthermia genes in Iceland: classification and actionable findings in a population databaseRún Friðriksdóttir, Arnar J. Jonsson, Brynjar Ö. Jensson, Kristinn Sverrisson, Gudny Anna Arnadottir, Sigurbjorg J. Skarphedinsdottir, Hildigunnur Katrínardóttir, Steinunn Snaebjornsdottir, Hákon Jónsson, Ögmundur Eiríksson et al. · 2021 · European Journal of Human Genetics
- Estimating the time since admixture from phased and unphased molecular dataThijs Janzen, Verónica Miró Pina · 2021 · Molecular Ecology Resources
- Addressing the feasibility of people of African descent finding living African relatives using direct‐to‐consumer genetic testingLaKisha Tawanda David · 2023 · American Journal of Biological Anthropology
- Joint Inference of Identity by Descent Along Multiple Chromosomes from Population SamplesChaozhi Zheng, Mary K. Kuhner, E. A. Thompson · 2014 · Journal of Computational Biology
- GenomeLaser: fast and accurate haplotyping from pedigree genotypesWenzhi Li, Guoxing Fu, Weinian Rao, Wei Xu, Li Ma, Shiwen Guo, Qing Song · 2015 · Bioinformatics
- HLA Type Inference via Haplotypes Identical by DescentManu N. Setty, Alexander Gusev, Itsik Pe’er · 2010 · Lecture notes in computer science
- A strategy to improve phasing of whole-genome sequenced individuals through integration of familial information from dense genotype panelsPierre Faux, Tom Druet · 2017 · Genetics Selection Evolution
- Detecting the dominance component of heritability in isolated and outbred human populationsAnthony F. Herzig, Teresa Nutile, Daniela Ruggiero, Marina Ciullo, Hervé Perdry, Anne‐Louise Leutenegger · 2018 · Scientific Reports
- Whole genome sequencing identifies common and rare structural variants contributing to hematologic traits in the NHLBI TOPMed programMarsha M. Wheeler, Adrienne M. Stilp, Shuquan Rao, Bjarni V. Halldórsson, Doruk Beyter, Jia Wen, Anna V. Mikhaylova, Caitlin McHugh, John Lane, Min-Zhi Jiang et al. · 2021 · medRxiv
- Phasing millions of samples achieves near perfect accuracy, enabling parent-of-origin classification of variantsCole M. Williams, Jared O’Connell, William A. Freyman, Christopher R. Gignoux, Sohini Ramachandran, Amy L. Williams · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
- A Pipeline for Phasing and Genotype Imputation on Mixed Human Data (Parents-Offspring Trios and Unrelated Subjects) by Reviewing Current Methods and SoftwareGiulia Nicole Baldrighi, Andrea Nova, Luisa Bernardinelli, Teresa Fazia · 2022 · Life
- SURFBAT: a surrogate family based association test building on large imputation reference panelsAnthony F. Herzig, Simone Rubinacci, Gaëlle Marenne, Hervé Perdry, Emmanuelle Génin, Dominique Campion, Jean‐François Dartigues, Jean‐François Deleuze, Jean‐Charles Lambert, Richard Redon et al. · 2024 · G3 Genes Genomes Genetics
- PedBLIMP: Extending Linear Predictors to Impute Genotypes in PedigreesWenan Chen, Daniel J. Schaid · 2014 · Genetic Epidemiology
- Review Routes for breaching and protecting genetic privacyYaniv Erlich, Arvind Narayanan · 2013
- The impact of reference composition and genome build on the accuracy of genotype imputation in Australian Angus cattleHassan Aliloo, Sam Clark · 2021 · Animal Production Science
- Whole genome SNP genotype piecemeal imputationYining Wang, Tim Wylie, Paul Stothard, Guohui Lin · 2015 · BMC Bioinformatics
- Genomic evaluation considering the mosaic genome of the crossbred pigClaudia A. Sevillano · 2018
- Ultra-fast Identity by Descent Detection in Biobank-Scale Cohorts using Positional Burrows–Wheeler TransformArdalan Naseri, Xiaoming Liu, Shaojie Zhang, Degui Zhi · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
- ImputeCoVNet: 2D ResNet Autoencoder for Imputation of SARS-CoV-2 SequencesAhmad Pesaranghader, Justin Pelletier, Jean‐Christophe Grenier, Raphaël Poujol, Julie Hussin · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Reconstructing parent genomes using siblings and other relativesYing Qiao, Ethan M. Jewett, Kimberly F. McManus, William A. Freyman, Joanne E. Curran, Sarah Williams‐Blangero, John Blangero, Amy L. Williams · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
- Methodological Considerations When Using Polygenic Scores to Explore Parent-Offspring Genetic Nurturing EffectsMelisa Chuong, M.J. Adams, A.S.F. Kwong, Chris Haley, C. Amador, Andrew Mark McIntosh · 2026 · Wellcome Open Research
- Security, privacy, and trust management in DNA computingFernandes, Maria, Decouchant, Jérémie, Couto, Francisco M. · 2023 · Advances in Computers
- Missense variants in FRS3 affect body mass index in populations of diverse ancestriesAndrea B. Jonsdottir, Garðar Sveinbjörnsson, Rósa B. Þórólfsdóttir, Max Tamlander, Vinicius Tragante, Þórhildur Ólafsdóttir, Sölvi Rögnvaldsson, Ásgeir Sigurðsson, Hannes P. Eggertsson, Hildur M. Aegisdottir et al. · 2025 · Nature Communications
- Phasing millions of samples achieves near perfect accuracy, enabling parent-of-origin analysesCole M Williams, Jared O’Connell, Ethan M. Jewett, William A. Freyman, Christopher R. Gignoux, Sohini Ramachandran, Amy L. Williams · 2025 · Human Genetics and Genomics Advances
- Chromosomal phase improves aneuploidy detection in non-invasive prenatal testing at low fetal DNA fractionsGiulio Genovese, Curtis J. Mello, Po‐Ru Loh, Robert E. Handsaker, Seva Kashin, Christopher W. Whelan, Lucy A. Bayer-Zwirello, Steven A. McCarroll · 2022 · Scientific Reports
- A Random Forests Framework for Modeling Haplotypes as Mosaics of Reference HaplotypesPierre Faux, Pierre Geurts, Tom Druet · 2019 · Frontiers in Genetics
- Optimized variant calling for estimating kinship.A. Woerner, Sammed N. Mandape, Kapema Bupe Kapema, Tiffany Duque, Amy Smuts, J. King, Benjamin Crysup, Xue-Wen Wang, Meng Huang, Jian-Ye Ge et al. · 2022 · Forensic Science International: Genetics
- Identifying mutation regions for closely related individuals without a known pedigreeWenjuan Cui, Lusheng Wang · 2012 · BMC Bioinformatics
- The genome as pharmacopeia: Association of genetic dose with phenotypic responseSamir Wadhawan, Heiko Runz, Julja Burchard · 2015 · Biochemical Pharmacology
- Family genome browser: visualizing genomes with pedigree informationLiran Juan, Yongzhuang Liu, Yongtian Wang, Mingxiang Teng, Yadong Wang, Yadong Wang · 2015 · Bioinformatics
- A practical approach to detect ancestral haplotypes in livestock populationsEnrique Sánchez-Molano, Dimitrios Tsiokos, Dimitrios Chatziplis, H. Jorjani, Lorenzo Degano, Clara Díaz, A. Rossoni, Hermann Schwarzenbacher, Franz R. Seefried, L. Varona et al. · 2016 · BMC Genetics
- Incorporating information from markers in LD with test locus for detecting imprinting and maternal effectsFangyuan Zhang, Shili Lin · 2020 · European Journal of Human Genetics
- HaploMaker: An improved algorithm for rapid haplotype assembly of genomic sequencesMario Fruzangohar, William A Timmins, Olena Y. Kravchuk, Julian Taylor · 2022 · GigaScience
- Genetic risk of cholangiocarcinoma is linked to the autophagy gene ATG7Stephanie Greer, Margret Helga Ogmundsdottir, Jiamin Chen, Billy T. Lau, Richard Glenn C. Delacruz, Imelda T. Sandoval, Sigrún Kristjánsdóttir, David A. Jones, Derrick S. Haslem, Robin Romero et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
- Pedigree-assisted genotype imputation enables cost-effective genomic prediction in Penaeus vannameiMianyu Liu, Qiang Fu, Ping Wang, Guangfeng Qiang, Kun Luo, Baolong CHEN, Sheng Luan, Jie Kong, Pao Xu · 2026 · Scientific Reports
- Public policymaking and its analysis at National and European LevelsGiandomenico Majone · 2015 · Studia z Polityki Publicznej
- Genetic architecture of band neutrophil fraction in IcelandGudjon R. Oskarsson, M. K. Magnusson, A. Oddsson, B. Jensson, Run Fridriksdottir, G. Arnadottir, Hildigunnur Katrínardóttir, S. Rognvaldsson, G. Halldorsson, G. Sveinbjornsson et al. · 2022 · Communications Biology
- Haplotyping-Assisted Diploid Assembly and Variant Detection with Linked ReadsYunfei Hu, Chao Yang, Lu Zhang, Xin Zhou · 2022 · Methods in molecular biology
- The overview of forensic genetic genealogyUrszula Rogalla-Ładniak · 2023 · Archives of Forensic Medicine and Criminology
- CCS‐Consensuser: A Haplotype‐Aware Consensus Generator for PacBio Amplicon SequencesCarlos Congrains, Forest T. Bremer, J. Dupuis, N. Barr, Ivonne J. Garzón-Orduña, D. Rubinoff, Camiel Doorenweerd, M. Jose, K. Morris, A. Kauwe et al. · 2025 · Molecular Ecology Resources
- Extending long-range phasing and haplotype library imputation algorithms to large and heterogeneous datasetsDaniel Money, David L. Wilson, Janez Jenko, Andrew Whalen, S. Thorn, Gregor Gorjanc, John M. Hickey · 2020 · Genetics Selection Evolution
- Making a haplotype catalog with estimated frequencies based on SNP homozygotesYumi Yamaguchi‐Kabata, Tatsuhiko Tsunoda, Atsushi Takahashi, Naoya Hosono, Michiaki Kubo, Yusuke Nakamura, Naoyuki Kamatani · 2010 · Journal of Human Genetics
- HAPI-GenOlivia Choudhury, Ankush Chakrabarty, Scott Emrich · 2016 · ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB)
- Population IsolatesIlenia Zara · 2015 · Springer eBooks
- Impact of co-occurrent assortative mating and vertical cultural transmission on measures of genetic associationsAnthony F. Herzig, Camille Noûs, Aude Saint Pierre, Hervé Perdry · 2026 · Theoretical Population Biology
- Privacy in the Genomic EraMuhammad Naveed, Erman Ayday, Ellen Wright Clayton, Jacques Fellay, Carl A. Gunter, Jean‐Pierre Hubaux, Bradley Malin, Xiaofeng Wang · 2014 · arXiv (Cornell University)
- Large-scale comparison of immunoassay- and aptamer-based plasma proteomics through genetics and diseaseGrímur Hjörleifsson Eldjárn, Egil Ferkingstad, Sigrún H. Lund, Hannes Helgason, Ólafur Þ. Magnússon, Thorunn Asta Olafsdottir, Bjarni V. Halldórsson, Pall I. Olason, Florian Zink, Sigurjon Axel Gudjonsson et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Characterizing identity by descent segments in Chinese interpopulation unrelated individual pairsQiqi Ji, Yining Yao, Zhimin Li, Zhihan Zhou, Jinglei Qian, Qiqun Tang, Jianhui Xie · 2024 · Molecular Genetics and Genomics
- InPhaDel: integrative shotgun and proximity-ligation sequencing to phase deletions with single nucleotide polymorphismsAnand D. Patel, Peter Edge, Siddarth Selvaraj, Vikas Bansal, Vineet Bafna · 2016 · Nucleic Acids Research
- Tools for genetic data management and strategies for optimized imputation of missing genotypesFengshen Kuo · 2014
- A Look to the FutureErick R. Scott, Richard L. Wallsten · 2019 · Elsevier eBooks
- Phased Genome Sequencing Through Chromosome SortingXi Chen, Hong Yang, Wing Hung Wong · 2017 · Methods in molecular biology
- Dissection of identical‐by‐descent segments during the formation of foundation parents derived from Suwan germplasm of maizeXiangyang Guo, Xun Wu, Wu WenQiang, Angui Wang, Pengfei Liu, Yunfang Zhu, Hong Ren, Zehui Chen, Hongbing Luo · 2020 · Plant Breeding
- Improved haplotyping of rare variants using next-generation sequence dataFouad Zakharia, Carlos D. Bustamante · 2012 · arXiv (Cornell University)
- Pydigree: a python library for manipulation and forward-time simulation and of genetic datasetsJames E. Hicks · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
- Faculty Opinions recommendation of DNA methylation as a mediator of HLA-DRB1*15:01 and a protective variant in multiple sclerosis.Robyn Marjorie Lucas · 2018 · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
- Pregnancy-Associated Bleeding and Genetics: Five Sequence Variants in the Myometrium and Progesterone Signaling Pathway are associated with postpartum hemorrhageDavid Westergaard, Valgerður Steinthórsdóttir, Lilja Stefánsdóttir, Palle Duun Rohde, Xiaoping Wu, Frank Geller, Jaakko S. Tyrmi, Aki Samuli Havulinna, Pol Solé-Navais, Christopher J. Flatley et al. · 2023 · medRxiv