Personalized copy number and segmental duplication maps using next-generation sequencing
Alkan, Can, Kidd, Jeffrey M, Marques-Bonet, Tomas, Aksay, Gozde, Antonacci, Francesca, Hormozdiari, Fereydoun, Kitzman, Jacob O, Baker, Carl, Malig, Maika, Mutlu, Onur, Sahinalp, S Cenk, Gibbs, Richard A, Eichler, Evan E·2009·Nature Genetics
DOI 10.1038/ng.437
Cited by (749)
Items 701–749 of 749
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- Additional file 2 of Technology dictates algorithms: recent developments in read alignmentMohammed Alser, Jeremy Rotman, Dhrithi Deshpande, Kodi Taraszka, Huwenbo Shi, Pelin Icer Baykal, Yang, Harry Taegyun, Victor Xue, Knyazev, Sergey, Singer, Benjamin D. et al. · 2021 · Figshare
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- Additional file 2 of Pattern matching for high precision detection of LINE-1s in human genomesJuan O. López, Jaime Seguel, Chamorro, Andres, Ramos, Kenneth S. · 2022 · Figshare
- Additional file 2 of CHOP: haplotype-aware path indexing in population graphsTom Mokveld, Jasper Linthorst, Zaid Al-Ars, Henne H. Holstege, Marcel J. T. Reinders · 2020 · Figshare
- Additional file 1 of VALOR2: characterization of large-scale structural variants using linked-readsFatih Karaoğlanoğlu, Camir Ricketts, Ezgi Ebren, Marzieh Eslami Rasekh, Hajirasouliha, Iman, Alkan, Can · 2020 · Figshare
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- Additional file 3 of Distinct structural variants and repeat landscape shape the genomes of the ancient grapes Aglianico and FalanghinaRiccardo Aversano, Marina Iovene, Esposito, Salvatore, Alberto L’Abbate, Clizia Villano, Ermanno Di Serio, Maria Francesca Cardone, Carlo Bergamini, Cigliano, Riccardo Aiese, Vincenzo D’Amelia et al. · 2024 · Figshare
- Additional file 2 of Detecting copy number variation in next generation sequencing data from diagnostic gene panelsSingh, Ashish Kumar, Maren Fridtjofsen Olsen, Liss Anne Solberg Lavik, Trine Vold, Finn Drabløs, Wenche Sjursen · 2021 · Figshare
- Additional file 2 of CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein structureAles Varabyou, Markus J. Sommer, Beril Erdogdu, Ida Shinder, Ilia Minkin, Chao, Kuan-Hao, Sukhwan Park, Jakob Heinz, Christopher Pockrandt, Alaina Shumate et al. · 2024 · Figshare
- Additional file 1 of HATCHet2: clone- and haplotype-specific copy number inference from bulk tumor sequencing dataMyers, Matthew A., Brian Arnold, Vineet Bansal, Metin Balaban, Katelyn M. Mullen, Simone Zaccaria, Benjamin J. Raphael · 2024 · Figshare
- Additional file 2 of Genomic reproducibility in the bioinformatics eraPelin Icer Baykal, Pawel Labaj, Florian M. Markowetz, Lynn M. Schriml, Daniel Johannes Stekhoven, Mangul, Serghei, Niko Beerenwinkel · 2024 · Figshare
- Additional file 4 of Detecting copy number variation in next generation sequencing data from diagnostic gene panelsSingh, Ashish Kumar, Maren Fridtjofsen Olsen, Liss Anne Solberg Lavik, Trine Vold, Finn Drabløs, Wenche Sjursen · 2021 · Figshare
- Joint Segmental Duplication Co-option Drives Human-specific Transcriptional Readthrough and Expression Fine-tuning of NPEPPS - TBC1D3Kaiyue Ma, Zikun Yang, Zhengtong Li, Jingyi Guo, Da Lian, Ziyi Wang, Hongyi Ma, Shilong Zhang, Lianting Fu, Hezheng Lyu et al. · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
- Caractérisation des différences de structures chromosomiques dans l'espèce Musa acuminata par re-séquençage NGS : le cas de l'accession "Pahang"Guillaume Martin · 2014 · theses.fr (ABES)
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