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Cited by 582

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Genome-wide association study identifies five loci associated with lung function

Open access
Wellcome Trust Case Control Consortium, Repapi, Emmanouela, The NSHD Respiratory Study Team, Sayers, Ian, Wain, Louise V, Burton, Paul R, Johnson, Toby, Obeidat, Ma'en, Zhao, Jing Hua, Ramasamy, Adaikalavan, Zhai, Guangju, Vitart, Veronique, Huffman, Jennifer E, Igl, Wilmar, Albrecht, Eva, Deloukas, Panos, Henderson, John, Granell, Raquel, McArdle, Wendy L, Rudnicka, Alicja R, Barroso, Inês, Loos, Ruth J F, Wareham, Nicholas J, Mustelin, Linda, Rantanen, Taina, Surakka, Ida, Imboden, Medea, Wichmann, H Erich, Grkovic, Ivica, Jankovic, Stipan, Zgaga, Lina, Hartikainen, Anna-Liisa, Peltonen, Leena, Gyllensten, Ulf, Johansson, Åsa, Zaboli, Ghazal, Campbell, Harry, Wild, Sarah H, Wilson, James F, Gläser, Sven, Homuth, Georg, Völzke, Henry, Mangino, Massimo, Soranzo, Nicole, Spector, Tim D, Polašek, Ozren, Rudan, Igor, Wright, Alan F, Heliövaara, Markku, Ripatti, Samuli, Pouta, Anneli, Naluai, Åsa Torinsson, Olin, Anna-Carin, Torén, Kjell, Cooper, Matthew N, James, Alan L, Palmer, Lyle J, Hingorani, Aroon D, Wannamethee, S Goya, Whincup, Peter H, Smith, George Davey, Ebrahim, Shah, McKeever, Tricia M, Pavord, Ian D, MacLeod, Andrew K, Morris, Andrew D, Porteous, David J, Cooper, Cyrus, Dennison, Elaine, Shaheen, Seif, Karrasch, Stefan, Schnabel, Eva, Schulz, Holger, Grallert, Harald, Bouatia-Naji, Nabila, Delplanque, Jérôme, Froguel, Philippe, Blakey, John D, Britton, John R, Morris, Richard W, Holloway, John W, Lawlor, Debbie A, Hui, Jennie, Nyberg, Fredrik, Jarvelin, Marjo-Riitta, Jackson, Cathy, Kähönen, Mika, Kaprio, Jaakko, Probst-Hensch, Nicole M, Koch, Beate, Hayward, Caroline, Evans, David M, Elliott, Paul, Strachan, David P, Hall, Ian P, Tobin, Martin D·2010·Nature Genetics

Abstract

Pulmonary function measures are heritable traits that predict morbidity and mortality and define chronic obstructive pulmonary disease (COPD). We tested genome-wide association with forced expiratory volume in 1 s (FEV1) and the ratio of FEV1 to forced vital capacity (FVC) in the SpiroMeta consortium (n = 20,288 individuals of European ancestry). We conducted a meta-analysis of top signals with data from direct genotyping (n ≤ 32,184 additional individuals) and in silico summary association data from the CHARGE Consortium (n = 21,209) and the Health 2000 survey (n ≤ 883). We confirmed the reported locus at 4q31 and identified associations with FEV1 or FEV1/FVC and common variants at five additional loci: 2q35 in TNS1 (P = 1.11 × 10−12), 4q24 in GSTCD (2.18 × 10−23), 5q33 in HTR4 (P = 4.29 × 10−9), 6p21 in AGER (P = 3.07 × 10−15) and 15q23 in THSD4 (P = 7.24 × 10−15). mRNA analyses showed expression of TNS1, GSTCD, AGER, HTR4 and THSD4 in human lung tissue. These associations offer mechanistic insight into pulmonary function regulation and indicate potential targets for interventions to alleviate respiratory disease.

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Authors
Wellcome Trust Case Control Consortium, Repapi, E., The NSHD Respiratory Study Team, Sayers, I., Wain, L. V., Burton, P. R., Johnson, T., Obeidat, M., Zhao, J. H., Ramasamy, A., Zhai, G., Vitart, V., Huffman, J. E., Igl, W., Albrecht, E., Deloukas, P., Henderson, J., Granell, R., McArdle, W. L., Rudnicka, A. R., Barroso, I., Loos, R. J. F., Wareham, N. J., Mustelin, L., Rantanen, T., Surakka, I., Imboden, M., Wichmann, H. E., Grkovic, I., Jankovic, S., Zgaga, L., Hartikainen, A.-L., Peltonen, L., Gyllensten, U., Johansson, Å., Zaboli, G., Campbell, H., Wild, S. H., Wilson, J. F., Gläser, S., Homuth, G., Völzke, H., Mangino, M., Soranzo, N., Spector, T. D., Polašek, O., Rudan, I., Wright, A. F., Heliövaara, M., Ripatti, S., Pouta, A., Naluai, Å. T., Olin, A.-C., Torén, K., Cooper, M. N., James, A. L., Palmer, L. J., Hingorani, A. D., Wannamethee, S. G., Whincup, P. H., Smith, G. D., Ebrahim, S., McKeever, T. M., Pavord, I. D., MacLeod, A. K., Morris, A. D., Porteous, D. J., Cooper, C., Dennison, E., Shaheen, S., Karrasch, S., Schnabel, E., Schulz, H., Grallert, H., Bouatia-Naji, N., Delplanque, J., Froguel, P., Blakey, J. D., Britton, J. R., Morris, R. W., Holloway, J. W., Lawlor, D. A., Hui, J., Nyberg, F., Jarvelin, M.-R., Jackson, C., Kähönen, M., Kaprio, J., Probst-Hensch, N. M., Koch, B., Hayward, C., Evans, D. M., Elliott, P., Strachan, D. P., Hall, I. P., & Tobin, M. D.
Venue
Nature Genetics
Published
2009-12-13
Volume
42
Issue
1
Pages
36-44
ISSN
  • 1061-4036 (ISSN-L)
  • 1546-1718
OpenAlex
W2107766358
Cited by
582
References
5
FWCI
27.09
Type
journal article
Language
en
Open access
bronze

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CoChat. (2026). Citation check: Genome-wide association study identifies five loci associated with lung function. https://app.cochat.ai/papers/10.1038/ng.501
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Wellcome Trust Case Control Consortium, Repapi, E., The NSHD Respiratory Study Team, Sayers, I., Wain, L. V., Burton, P. R., Johnson, T., Obeidat, M., Zhao, J. H., Ramasamy, A., Zhai, G., Vitart, V., Huffman, J. E., Igl, W., Albrecht, E., Deloukas, P., Henderson, J., Granell, R., McArdle, W. L., . . . Tobin, M. D. (2010). Genome-wide association study identifies five loci associated with lung function. Nature Genetics. https://doi.org/10.1038/ng.501

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