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Expansion of an unstable trinucleotide CAG repeat in spinocerebellar ataxia type 1
Abstract
Spinocerebellar ataxia type 1 (SCA1) is an autosomal dominant disorder characterized by neurodegeneration of the cerebellum, spinal cord and brainstem. A 1.2-Megabase stretch of DNA from the short arm of chromosome 6 containing the SCA1 locus was isolated in a yeast artificial chromosome contig and subcloned into cosmids. A highly polymorphic CAG repeat was identified in this region and was found to be unstable and expanded in individuals with SCA1. There is a direct correlation between the size of the (CAG)n repeat expansion and the age-of-onset of SCA1, with larger alleles occurring in juvenile cases. We also show that the repeat is present in a 10 kilobase mRNA transcript. SCA1 is therefore the fifth genetic disorder to display a mutational mechanism involving an unstable trinucleotide repeat.
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“spinocerebellar ataxia type 1 (SCA1), a disease caused by a polyglutamine expansion in the protein ATAXIN1 (ATXN1).”
From Polyglutamine Disease Toxicity Is Regulated by Nemo-like Kinase in Spinocerebellar Ataxia Type 1 (2013) · cites this paper as Orr et al., 1993
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“In a recent study, loss of Purkinje cells in SCA1 transgenic mice was exaggerated by inactivation of the ubiqutin-proteasome pathway, even though the prevalence of intranuclear aggregates decreased (6).”
BackgroundYamamoto, K., Ikeda, S., Hanyu, N., Takeda, S., & Yanagisawa, N. (1998) · Journal of Medical Genetics · doi:10.1136/jmg.35.1.23 · Cited by 60
Matsumura, R., Futamura, N., Fujimoto, Y., Yanagimoto, S., Horikawa, H., Suzumura, A., & Takayanagi, T. (1997) · Neurology · doi:10.1212/wnl.49.5.1238 · Cited by 60
Goldman, A., Ramsay, M., & Jenkins, T. (1994) · Journal of Medical Genetics · doi:10.1136/jmg.31.1.37 · Cited by 60
Trinucleotide repeat expansions in neurological disease.
Warren, S. T., & Nelson, D. (1993) · Current Opinion in Neurobiology · doi:10.1016/0959-4388(93)90149-s · Cited by 60
Daniel, D. C., & Johnson, E. (2017) · Gene · doi:10.1016/j.gene.2017.12.004 · Cited by 59
“…myotonic dystrophy (Mulders et al., 2009), Huntington’s disease (La Spada et al., 1994; Kay et al., 2015), spinocerebellar ataxia type 1 (SCA1) (Orr et al., 1993; Andres et al., 2004), and dentatorubral-pallidoluysian atrophy (DRPLA) (Koide et al., 1994; La Spada et al., 1994; Evers et al.,…”
BackgroundGalatolo, D., Tessa, A., Filla, A., & Santorelli, F. (2017) · Neurogenetics · doi:10.1007/s10048-017-0532-6 · Cited by 59
Kraus-Perrotta, C., & Lagalwar, S. (2016) · Cerebellum & Ataxias · doi:10.1186/s40673-016-0058-y · Cited by 65
“and trinucleotide repeat length often increase in subsequent generations, a form of repeat instability that is indicative of genetic anticipation [4].”
InfluentialComputational neurobiology is a useful tool in translational neurology: the example of ataxia
Brown, S.-A. N., McCullough, L. D., & Loew, L. M. (2015) · Frontiers in Neuroscience · doi:10.3389/fnins.2015.00001 · Cited by 75
“…mutations in genes that code for ataxin 1, ataxin 2, ataxin 3, and the CACNA1A calcium channel, respectively (Supplementary Material, Table S1) (Gispert et al., 1993; Orr et al., 1993; Kawaguchi et al., 1994; Pulst et al., 1996; Zhuchenko et al., 1997; Tonelli et al., 2006; Bürk et al., 2014).”
BackgroundThe therapeutic potential of siRNA in gene therapy of neurodegenerative disorders.
Koutsilieri, E., Rethwilm, A., & Scheller, C. (2007) · Journal of neural transmission. Supplementum · doi:10.1007/978-3-211-73574-9_7 · Cited by 59
“SCA1 is a dominantly-inherited progressive disease, caused by extended (44–82) glutamine-coding (CAG)-repeats that are located within the ataxin-1 gene ( Orr et al., 1993 ).”
BackgroundSystematic review of autosomal recessive ataxias and proposal for a classification
Beaudin, M., Klein, C. J., Rouleau, G. A., & Dupré, N. (2017) · Cerebellum & Ataxias · doi:10.1186/s40673-017-0061-y · Cited by 74
Bergeron, D., Lapointe, C., Bissonnette, C., Tremblay, G., Motard, J., & Roucou, X. (2013) · Journal of Biological Chemistry · doi:10.1074/jbc.m113.472654 · Cited by 61
Damage to the reticulotegmental nucleus of the pons in spinocerebellar ataxia type 1, 2, and 3
Rüb, U., Bürk, K., Schöls, L., Brunt, E., de Vos, R., Díaz, G. O., Gierga, K., Ghebremedhin, E., Schultz, C., Turco, D. D., et al. (2004) · Neurology · doi:10.1212/01.wnl.0000140498.24112.8c · Cited by 58
Beauchemin, A., Gottlieb, B., Beitel, L. K., Elhaji, Y., Pinsky, L., & Trifiro, M. (2001) · Brain Research Bulletin · doi:10.1016/s0361-9230(01)00583-4 · Cited by 58
Age of onset evidence for anticipation in familial non‐Hodgkin's lymphoma
Wiernik, P., Wang, S. Q., Hu, X.-P., Marino, P., & Paietta, E. (2000) · British Journal of Haematology · doi:10.1046/j.1365-2141.2000.01815.x · Cited by 58
Okamura-Oho, Y., Miyashita, T., Ohmi, K., & Yamada, M. (1999) · Human Molecular Genetics · doi:10.1093/hmg/8.6.947 · Cited by 58
A unique origin and multistep process for the generation of expanded DRPLA triplet repeats.
Yanagisawa, H., Fujii, K., Nagafuchi, S., Nakahori, Y., Nakagome, Y., Akane, A., Nakamura, M., Sano, A., Komure, O., Kondo, I., et al. (1996) · Human Molecular Genetics · doi:10.1093/hmg/5.3.373 · Cited by 58
Uyama, E., Kondo, I., Uchino, M., Fukushima, T., Murayama, N., Kuwano, A., Inokuchi, N., Ohtani, Y., & Ando, M. (1995) · Journal of the Neurological Sciences · doi:10.1016/0022-510x(95)00019-x · Cited by 60
Mouse Models of Polyglutamine Diseases: Review and Data Table. Part I
Figiel, M., Szlachcic, W. J., Switonski, P. M., Gabka, A., & Krzyżosiak, W. J. (2012) · Molecular Neurobiology · doi:10.1007/s12035-012-8315-4 · Cited by 60
“spinal and bulbar muscular atrophy, X-linked 1 (SMAX1/ SBMA) [2, 3]; six spinocerebellar ataxias (SCA) type 1 [4], type 2 [5], Machado–Joseph disease (MJD/SCA3) [6], type 6 [7], type 7 [8], and type 17 [9, 10]; and dentatorubralpallidoluysian atrophy (DRPLA) [11, 12].”
BackgroundNeurotoxic effects of androgens in spinal and bulbar muscular atrophy
Parodi, S., & Pennuto, M. (2011) · Frontiers in Neuroendocrinology · doi:10.1016/j.yfrne.2011.06.003 · Cited by 59
The hereditary spinocerebellar ataxias in Japan
Sasaki, H., Yabe, I., & Tashiro, K. (2003) · Cytogenetic and Genome Research · doi:10.1159/000072855 · Cited by 57
“Subsequently, this HLA-linked SCA was assigned to 6p23 as SCA1, and it is now known to be caused by abnormal CAG repeat expansion in the coding region of the ataxin-1 gene (Orr et al., 1993).”
BackgroundAutosomal dominant cerebellar ataxia deafness and narcolepsy.
Melberg, A., Hetta, J., Dahl, N., Nennesmo, I., Bengtsson, M., Wibom, R., Grant, C., Gustavson, K., & Lundberg, P. (1995) · Journal of Neurological Sciences · doi:10.1016/0022-510x(95)00228-0 · Cited by 57
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Sigma-1 (σ1) Receptor in Memory and Neurodegenerative Diseases
Maurice, T., & Goguadze, N. (2017) · Handbook of experimental pharmacology · doi:10.1007/164_2017_15 · Cited by 65
Aberrant Cerebellar Circuitry in the Spinocerebellar Ataxias
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Gene Silencing in Higher Plants and Related Phenomena in Other Eukaryotes
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Lai, S., O’Callaghan, B. L., Zoghbi, H. Y., & Orr, H. T. (2011) · Journal of Biological Chemistry · doi:10.1074/jbc.m111.238527 · Cited by 54
Self-citationSocal, M., Emmel, V. E., Rieder, C., Hilbig, A., Saraiva-Pereira, M., & Jardim, L. B. (2009) · Parkinsonism & Related Disorders · doi:10.1016/j.parkreldis.2008.09.005 · Cited by 56
“ATXN1, ATXN2, ATXN3, CACNA1A, and ATXN7 screenings were performed by PCR amplification using fluorescent primers [11,18–20].”
MethodBang, O., Lee, P., Kim, S. Y., Kim, H. J., & Huh, K. (2004) · Journal of Neurology Neurosurgery & Psychiatry · doi:10.1136/jnnp.2003.029819 · Cited by 56
Dorschner, M., Barden, D., & Stephens, K. (2002) · Journal of Molecular Diagnostics · doi:10.1016/s1525-1578(10)60689-7 · Cited by 56
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The androgen receptor CAG repeat polymorphism and its relationship to prostate cancer.
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Genomic structure of the human gene for spinocerebellar ataxia type 2 (SCA2) on chromosome 12q24.1.
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McMurray, C. T. (1995) · Chromosoma · doi:10.1007/bf00352220 · Cited by 126
“type I (Chung et al. 1993; Orr et al. 1993), hereditary dentorubral-pallidoluysian atrophy (DRPLA) (Koide et”
BackgroundAnalysis of spinocerebellar ataxia type 1 (SCA1)-related CAG trinucleotide expansion in Japan
Kameya, T., Abe, K., Aoki, M., Sahara, M., Tobita, M., Konno, H., & Itoyama, Y. (1995) · Neurology · doi:10.1212/wnl.45.8.1587 · Cited by 54
Miki, Y., Tanji, K., Mori, F., & Wakabayashi, K. (2014) · Neurobiology of Disease · doi:10.1016/j.nbd.2014.11.005 · Cited by 54
“HD is now known to be one of the nine polyglutamine diseases caused by the expansion of trinucleotide repeats encoding polyglutamine in their causative genes (Orr et al., 1993; Kawaguchi et al., 1994; Koide et al., 1994; Nagafuchi et al., 1994; Pulst et al., 1996; Martindale et al., 1998).”
Oligonucleotide-based strategies to combat polyglutamine diseases
Fiszer, A., & Krzyżosiak, W. J. (2014) · Nucleic Acids Research · doi:10.1093/nar/gku385 · Cited by 70
“SCA1: spinocerebellar ataxia type 1 (292) ATXN1 8–44/45–82 Ubiquitous Ataxin-1/∼85 kDa/transcription regulation, alternative splicing Purkinje cells, dentate nucleus, brainstem,”
BackgroundMariotti, C., Brusco, A., Bella, D. D., Cagnoli, C., Seri, M., Gellera, C., Donato, S. D., & Taroni, F. (2008) · Cerebellum · doi:10.1007/s12311-008-0053-9 · Cited by 55
“Since the identification of the first gene responsible for spinocerebellar ataxia type 1 (SCA1) in 1993 (4), an increasing number of genes and chromosomal loci have been characterized, demonstrating a large genetic heterogeneity in these hereditary disorders (2,3,5).”
BackgroundBasri, R., Yabe, I., Soma, H., & Sasaki, H. (2007) · Journal of Human Genetics · doi:10.1007/s10038-007-0182-x · Cited by 48
“To date, 29 different genetic loci have been reported to be responsible for ADCA (http://www.gene.ucl.ac.uk/cgi-bin/nomenclature): Spinocerebellar ataxia type 1 (SCA1) on chromosome 6p22-p23 (Orr et al. 1993); SCA2 on 12q23-q24.”
BackgroundResultInfluentialIdentification and expression of a mouse ortholog of A2BP1
Kiehl, T., Shibata, H., Vo, T., Huynh, D., & Pulst, S. (2001) · Mammalian Genome · doi:10.1007/s00335-001-2056-4 · Cited by 55
“…disease (The Huntington’s Disease Collaborative Research Group 1993), spinobulbar muscular atrophy (SBMA; La Spada et al. 1991) and the spinocerebellar ataxias (SCA1: Orr et al. 1993; SCA2; Pulst et al. 1996; SCA3: Kawaguchi et al. 1994; SCA6: Zhuchenko et al. 1997; SCA7: David et al. 1997).”
BackgroundThe androgen receptor: Physiology and pathophysiology
Quigley, C. A. (1998) · Springer eBooks · doi:10.1007/978-3-642-72185-4_2 · Cited by 50
Storey, E. (2014) · Seminars in neurology · doi:10.1055/s-0034-1386766 · Cited by 54
Mutations in American families with spinocerebellar ataxia (SCA) type 3
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Neuropsychological test performance in patients with dominantly inherited spinocerebellar ataxia
Kish, S., El-Awar, M., Stuss, D., Nobrega, J., Currier, R., Aita, J., Schut, L., Zoghbi, H., & Freedman, M. (1994) · Neurology · doi:10.1212/wnl.44.9.1738 · Cited by 54
Self-citationPrevalence of Inherited Ataxias in the Province of Padua, Italy
Zortea, M., Armani, M., Pastorello, E., Núñez, G. G., Lombardi, S., Tonello, S., Rigoni, M., Zuliani, L., Mostacciuolo, M., Gellera, C., et al. (2004) · Neuroepidemiology · doi:10.1159/000080092 · Cited by 53
Metadata
- Authors
- Orr, H. T., Chung, M.-Y., Banfi, S., Kwiatkowski, T. J., Servadio, A., Beaudet, A. L., McCall, A. E., Duvick, L. A., Ranum, L. P. W., & Zoghbi, H. Y.
- Affiliations
- University of Minnesota (US)
- Baylor College of Medicine (US)
- Howard Hughes Medical Institute (US)
- ORCID
- Venue
- Nature Genetics
- Published
- 1993-07
- Volume
- 4
- Issue
- 3
- Pages
- 221-226
- ISSN
- 1061-4036 (ISSN-L)
- 1546-1718
- OpenAlex
- W2255469197
- Cited by
- 1,632
- References
- 0
- Citations by year
- 2026: 20 · 2025: 24 · 2024: 30 · 2023: 37 · 2022: 45 · 2021: 35 · 2020: 41 · 2019: 27 · 2018: 42 · 2017: 35 · 2016: 23 · 2015: 19 · 2014: 41 · 2013: 50 · 2012: 34
- FWCI
- 40.91
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Genetics (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Genetic Neurodegenerative Diseases
- Health Sciences › Medicine › Pathology and Forensic Medicine › Genetic factors in colorectal cancer
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
- Keywords
- spinocerebellar ataxia type 1, CAG repeat expansion, trinucleotide repeat instability, age of onset, chromosome 6, repeat polymorphism, mRNA transcripts, neurodegeneration
- MeSH terms
- Base Sequence, Chromosome Mapping, Chromosomes, Human, Pair 6, Cloning, Molecular, DNA, Female, Humans, Male, Molecular Sequence Data, Oligodeoxyribonucleotides, Pedigree, Repetitive Sequences, Nucleic Acid, Spinocerebellar Degenerations, Transcription, Genetic, Polymerase Chain Reaction
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