Direct detection of DNA methylation during single-molecule, real-time sequencing

Flusberg, Benjamin A, Webster, Dale R, Lee, Jessica H, Travers, Kevin J, Olivares, Eric C, Clark, Tyson A, Korlach, Jonas, Turner, Stephen W·2010·Nature Methods

DOI 10.1038/nmeth.1459

Cited by (1,000)

Items 301–400 of 1,000

Detecting rare mutations and DNA damage with sequencing-based methods
Daniel B. Sloan, Amanda K. Broz, Joel Sharbrough, Zhi-Qiang Wu · 2018 · Trends in Biotechnology
Validation of high throughput sequencing and microbial forensics applications
Bruce Budowle, Nancy D Connell, Anna Bielecka-Oder, Rita R. Colwell, Cindi R. Corbett, Jacqueline Fletcher, Mats Forsman, Dana R. Kadavy, Alemka Markotić, Stephen Morse et al. · 2014 · Investigative Genetics
Genome and epigenome of a novel marine Thaumarchaeota strain suggest viral infection, phosphorothioation DNA modification and multiple restriction systems
Nathan A. Ahlgren, Yangyang Chen, David M. Needham, Alma E. Parada, Rohan Sachdeva, Vickie Trinh, Ting Chen, Jed A. Fuhrman · 2017 · Environmental Microbiology
MDR: an integrative DNA N6-methyladenine and N4-methylcytosine modification database for Rosaceae
Zhaoyu Liu, Jian-Feng Xing, Wei Chen, Meiwei Luan, Rui Xie, Jing Hua Huang, Shuang Xie, Chuan‐Le Xiao · 2019 · Horticulture Research
Nanopore sequencing meets epigenetics
Michael C. Schatz · 2017 · Nature Methods
Next generation sequencing based approaches to epigenomics
Martin Hirst, Marco A. Marra · 2010 · Briefings in Functional Genomics
Methods for detection of cytosine and thymine modifications in DNA
Mark Berney, Joanna F. McGouran · 2018 · Nature Reviews Chemistry
Direct full-length RNA sequencing reveals unexpected transcriptome complexity during Caenorhabditis elegans development
Runsheng Li, Xiaoliang Ren, Qiutao Ding, Yu Fang Bi, Dongying Xie, Zhongying Zhao · 2020 · Genome Research
Isoform Sequencing and State-of-Art Applications for Unravelling Complexity of Plant Transcriptomes
Dong An, Hieu X. Cao, Changsheng Li, Klaus Humbeck, Wenqin Wang · 2018 · Genes
Cutaneous Melanoma Classification: The Importance of High-Throughput Genomic Technologies
Cristian Scatena, Daniela Murtas, Sara Tomei · 2021 · Frontiers in Oncology
Photoelectrochemical biosensor for hydroxymethylated DNA detection and T4-β-glucosyltransferase activity assay based on WS2 nanosheets and carbon dots
Chengji Sui, Tingting Wang, Yunlei Zhou, Huanshun Yin, Xiangjian Meng, Shenran Zhang, Geoffrey I. N. Waterhouse, Qin Hua Xu, Yuping Zhuge, Shiyun Ai · 2018 · Biosensors and Bioelectronics
Gene-Specific Targeting of DNA Methylation in the Mammalian Genome
Arthur Urbano, Jim Smith, Robert J. Weeks, Aniruddha Chatterjee · 2019 · Cancers
From pharmacogenetics to pharmaco-omics: Milestones and future directions
Chiara Auwerx, Marie C. Sadler, Alexandre Reymond, Zoltán Kutalik · 2022 · Human Genetics and Genomics Advances
Ten Eleven Translocation Enzymes and 5-Hydroxymethylation in Mammalian Development and Cancer
Shannon R. Morey Kinney, Sriharsa Pradhan · 2012 · Advances in experimental medicine and biology
Micro- and nanoscale devices for the investigation of epigenetics and chromatin dynamics
Carlos A. Aguilar, Harold G. Craighead · 2013 · Nature Nanotechnology
Third-generation sequencing techniques and applications to drug discovery
Fatih Ozsolak · 2012 · Expert Opinion on Drug Discovery
A Litmus‐Type Colorimetric and Fluorometric Volatile Organic Compound Sensor Based on Inkjet‐Printed Polydiacetylenes on Paper Substrates
Bora Yoon, In‐Sung Park, Hyora Shin, Hye Jin Park, Chan Woo Lee, Jong‐Man Kim · 2013 · Macromolecular Rapid Communications
Cell-Free DNA-Methylation-Based Methods and Applications in Oncology
Francesca Galardi, Francesca De Luca, Dario Romagnoli, Chiara Biagioni, Erica Moretti, Laura Biganzoli, Angelo Di Leo, Ilenia Migliaccio, Luca Malorni, Matteo Benelli · 2020 · Biomolecules
Next‐generation technologies and data analytical approaches for epigenomics
Klaas Mensaert, Simon L. I. J. Denil, Geert Trooskens, Wim Van Criekinge, Olivier Thas, Tim De Meyer · 2013 · Environmental and Molecular Mutagenesis
Long read sequencing on its way to the routine diagnostics of genetic diseases
Giulia Olivucci, Emanuela Iovino, Giovanni Innella, Daniela Turchetti, Tommaso Pippucci, Pamela Magini · 2024 · Frontiers in Genetics
Interindividual Variability in Stress Susceptibility: A Role for Epigenetic Mechanisms in PTSD
Iva B. Zovkic, Jarrod P. Meadows, Garrett A. Kaas, J. David Sweatt · 2013 · Frontiers in Psychiatry
Real-time analysis and selection of methylated DNA by fluorescence-activated single molecule sorting in a nanofluidic channel
Benjamin R. Cipriany, Patrick J. Murphy, James A. Hagarman, Aline Cerf, David R. Latulippe, Stephen L. Levy, Jaime J. Benítez, Christine P. Tan, Juraj Topolancik, Paul D. Soloway et al. · 2012 · Proceedings of the National Academy of Sciences
The epigenomic interface between genome and environment in common complex diseases
Christopher G. Bell, Stephan Beck · 2010 · Briefings in Functional Genomics
Single‐Molecule Detection of 5‐Hydroxymethylcytosine in DNA through Chemical Modification and Nanopore Analysis
Wen‐Wu Li, Lingzhi Gong, Hagan Bayley · 2013 · Angewandte Chemie International Edition
The Translational Status of Cancer Liquid Biopsies
Siniša Bratulić, Francesco Gatto, Jens Nielsen · 2019 · Regenerative Engineering and Translational Medicine
Pull-down of 5-hydroxymethylcytosine DNA using JBP1-coated magnetic beads
Adam B. Robertson, John Arne Dahl, Rune Ougland, Arne Klungland · 2012 · Nature Protocols
Amplification-free long-read sequencing reveals unforeseen CRISPR-Cas9 off-target activity
Ida Höijer, Josefin Johansson, Sanna Gudmundsson, Chen-Shan Chin, Ignas Bunikis, Susana Häggqvist, Anastasia Emmanouilidou, Maria Wilbe, Marcel den Hoed, Marie-Louise Bondeson et al. · 2020 · Genome biology
DNA-m6A calling and integrated long-read epigenetic and genetic analysis with fibertools
Anupama Jha, Stephanie C. Bohaczuk, Yizi Mao, Jane Ranchalis, Benjamin J. Mallory, Alan Min, Morgan O. Hamm, Elliott G. Swanson, Danilo Dubocanin, Connor Finkbeiner et al. · 2024 · Genome Research
On the Use of Blood Samples for Measuring DNA Methylation in Ecological Epigenetic Studies
Arild Husby · 2020 · Integrative and Comparative Biology
Complete genome sequence of the Clostridium difficile laboratory strain 630Δerm reveals differences from strain 630, including translocation of the mobile element CTn5
Erika van Eijk, S. Anvar, H. Browne, Wai Y. Leung, J. Frank, Arnoud M. Schmitz, A. P. Roberts, W. K. Smits · 2015 · BMC Genomics
Nanostructured CMOS Wireless Ultra-Wideband Label-Free PCR-Free DNA Analysis SoC
Hamed Mazhab Jafari, Karim Abdelhalim, Leyla Soleymani, Edward Hartley Sargent, Shana O. Kelley, Roman Genov · 2014 · IEEE Journal of Solid-State Circuits
Centromere studies in the era of ‘telomere-to-telomere’ genomics
Karen H. Miga · 2020 · Experimental Cell Research
SMRT Sequencing Revealed Mitogenome Characteristics and Mitogenome-Wide DNA Modification Pattern in Ophiocordyceps sinensis
Xincong Kang, Liqin Hu, Pengyuan Shen, Rui Li, Dongbo Liu · 2017 · Frontiers in Microbiology
Deep6mA: A deep learning framework for exploring similar patterns in DNA N6-methyladenine sites across different species
Zutan Li, Hangjin Jiang, Lingpeng Kong, Yuanyuan Chen, Kun Lang, Xiaodan Fan, Liangyun Zhang, Cong Pian · 2021 · PLoS Computational Biology
Third‐Generation Sequencing of Epigenetic DNA
Bethany Searle, Markus Müller, Thomas Carell, Andrew Kellett · 2022 · Angewandte Chemie International Edition
Aluminum Metasurface with Hybrid Multipolar Plasmons for 1000-Fold Broadband Visible Fluorescence Enhancement and Multiplexed Biosensing
Radwanul Hasan Siddique, Shailabh Kumar, Vinayak Narasimhan, Hyounghan Kwon, Hyuck Choo · 2019 · ACS Nano
Whole-genome resequencing: changing the paradigms of SNP detection, molecular mapping and gene discovery
Xiangyang Xu, Guihua Bai · 2015 · Molecular Breeding
N6-Methyladenosine in RNA and DNA: An Epitranscriptomic and Epigenetic Player Implicated in Determination of Stem Cell Fate
Pengfei Ji, Xia Wang, Nina Xie, Yujing Li · 2018 · Stem Cells International
DNA mismatch and damage patterns revealed by single-molecule sequencing
Mei Hong Liu, Benjamin M. Costa, Emilia C. Bianchini, Una Choi, Rachel C. Bandler, Emilie Lassen, Marta Grońska-Pęski, Adam Schwing, Zachary R. Murphy, Daniel Rosenkjær et al. · 2024 · Nature
The Application of Next Generation Sequencing in DNA Methylation Analysis
Yingying Zhang, Albert Jeltsch · 2010 · Genes
Simultaneous single-molecule epigenetic imaging of DNA methylation and hydroxymethylation
Chun‐Xiao Song, Jiajie Diao, Axel T. Brünger, Stephen R. Quake · 2016 · Proceedings of the National Academy of Sciences
An electrochemical DNA biosensor analytic technique for identifying DNA methylation specific sites and quantify DNA methylation level
Jian Huang, Shu Zhang, Fei Mo, Shasha Su, Xi Chen, Yan Li, Lichao Fang, Hui Huang, Jun Deng, Huamin Liu et al. · 2018 · Biosensors and Bioelectronics
DNA methylation from a Type I restriction modification system influences gene expression and virulence in Streptococcus pyogenes
Taylor M. Nye, Kristin M. Jacob, Elena K. Holley, Juan M. Nevarez, Suzanne R. Dawid, Lyle A. Simmons, Michael E. Watson · 2019 · PLoS Pathogens
Perspectives of International Human Epigenome Consortium
Jae‐Bum Bae · 2013 · Genomics & Informatics
Deep-4mCW2V: A sequence-based predictor to identify N4-methylcytosine sites in Escherichia coli
Hasan Zulfiqar, Zi‐Jie Sun, Qin-Lai Huang, Shi-Shi Yuan, Hao Lv, Fanny Dao, Hao Lin, Yanwen Li · 2021 · Methods
An ecologist's guide for studying DNA methylation variation in wild vertebrates
Veronika N. Laine, Bernice Sepers, Melanie Lindner, Fleur Gawehns, Suvi Ruuskanen, Kees van Oers · 2022 · Molecular Ecology Resources
Comparative Genomics of the Campylobacter lari Group
William G. Miller, Emma Yee, Mary H. Chapman, Timothy P. L. Smith, James L. Bono, Steven Huynh, Craig Thomas Parker, Peter A. R. Vandamme, Khai Luong, Jonas Korlach · 2014 · Genome Biology and Evolution
Application of ChIP-Seq and Related Techniques to the Study of Immune Function
Daniel L. Northrup, Keji Zhao · 2011 · Immunity
Biochemical characterization of a Naegleria TET-like oxygenase and its application in single molecule sequencing of 5-methylcytosine
June E. Pais, Nan Dai, Esta Tamanaha, Romualdas Vaisvila, Alexey I. Fomenkov, Jurate Bitinaite, Zhiyi Sun, Shengxi Guan, Ivan Reis Correa Junior, Christopher J. Noren et al. · 2015 · Proceedings of the National Academy of Sciences
Quantitative Trait Loci, Epigenetics, Sugars, and MicroRNAs: Quaternaries in Phosphate Acquisition and Use
Carroll P. Vance · 2010 · PLANT PHYSIOLOGY
Genome and Methylome Variation in Helicobacter pylori With a cag Pathogenicity Island During Early Stages of Human Infection
Sandra Nell, Iratxe Estibariz, Juliane Krebes, Boyke Bunk, David Yates Graham, Jörg Overmann, Yi Song, Cathrin Spröer, Ines Yang, Thomas Wex et al. · 2017 · Gastroenterology
MASQC: Next Generation Sequencing Assists Third Generation Sequencing for Quality Control in N6-Methyladenine DNA Identification
Siqian Yang, Yaoxin Wang, Ying Chen, Qi Dai · 2020 · Frontiers in Genetics
Comparative Genome-Centric Analysis of Freshwater and Marine ANAMMOX Cultures Suggests Functional Redundancy in Nitrogen Removal Processes
Muhammad Ali, Dario Rangel Shaw, Mads Albertsen, Pascal Elias Saikaly · 2020 · Frontiers in Microbiology
Advances in mapping the epigenetic modifications of 5‐methylcytosine (5mC), N6‐methyladenine (6mA), and N4‐methylcytosine (4mC)
Hao Lv, Fanny Dao, Dan Zhang, Hui Qiong Yang, Hao Lin · 2021 · Biotechnology and Bioengineering
Amplification-free, CRISPR-Cas9 Targeted Enrichment and SMRT Sequencing of Repeat-Expansion Disease Causative Genomic Regions
Yu‐Chih Tsai, David Greenberg, James Powell, Ida Höijer, Adam Ameur, Maya Strahl, Ethan Ellis, Inger Jonasson, Ricardo Mouro Pinto, Vanessa Chantal Wheeler et al. · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
Low-Input High-Molecular-Weight DNA Extraction for Long-Read Sequencing From Plants of Diverse Families
Alessia Russo, Baptiste Mayjonade, Daniel Frei, Giacomo Potente, Roman T. Kellenberger, Léa Frachon, Dario Copetti, Bruno Studer, Jürg E. Frey, Ueli Grossniklaus et al. · 2022 · Frontiers in Plant Science
Profiling the epigenome using long-read sequencing
Tianyuan Liu, Ana Conesa · 2025 · Nature Genetics
Reversible Positioning of Single Molecules inside Zero-Mode Waveguides
Joseph Larkin, Mathieu Foquet, Stephen Turner, Jonas Korlach, Meni Wanunu · 2014 · Nano Letters
Environmental Heterogeneity and Phenotypic Divergence: Can Heritable Epigenetic Variation Aid Speciation?
Ruth Flatscher, Božo Frajman, Peter Schönswetter, Ovidiu Paun · 2012 · Genetics Research International
The current revolution in transposable element biology enabled by long reads
Saima Shahid, R. Keith Slotkin · 2020 · Current Opinion in Plant Biology
Experimental approaches to tracking mobile genetic elements in microbial communities
Christina Caroline Saak, Cong B. Dinh, Rachel J. Dutton · 2020 · FEMS Microbiology Reviews
DNA methylation across the tree of life, from micro to macro-organism
Nasrullah NASRULLAH, Abrar Hussain, Sagheer Ahmed, Mahmood Rasool, Abdul Jabbar Shah · 2022 · Bioengineered
Next Generation Sequencing: Chemistry, Technology and Applications
Pei Hui · 2012 · Topics in current chemistry
Base-resolution detection ofN4-methylcytosine in genomic DNA using 4mC-Tet-assisted-bisulfite- sequencing
Miao Yu, Lexiang Ji, Drexel A. Neumann, Dae-hwan Chung, Joseph D. Groom, Janet Westpheling, Chuan He, Robert J. Schmitz · 2015 · Nucleic Acids Research
Next-Generation Sequencing Approaches in Cancer: Where Have They Brought Us and Where Will They Take Us?
Véronique Leblanc, Marco A. Marra · 2015 · Cancers
DNA methylation profiling in nanochannels
Shuang Fang Lim, Alena Karpusenko, John J. Sakon, Joseph A. Hook, Tyra A. Lamar, Robert E. Riehn · 2011 · Biomicrofluidics
Epigenomic communication systems in humans and honey bees: From molecules to behavior
George L. Gabor Miklos, Ryszard Maleszka · 2010 · Hormones and Behavior
Sources of Fungal Genetic Variation and Associating It with Phenotypic Diversity
John William Taylor, Sara Branco, Cheng Da Gao, Christopher Hann-Soden, Liliam Montoya, Iman A. Sylvain, Pierre Gladieux · 2017 · Microbiology Spectrum
Photoelectrochemical biosensor for 5hmC detection based on the photocurrent inhibition effect of ZnO on MoS2/C3N4 heterojunction
Chengji Sui, Fei Li, Hanwen Wu, Huanshun Yin, Shenran Zhang, Geoffrey I. N. Waterhouse, Jun Wang, Lusheng Zhu, Shiyun Ai · 2019 · Biosensors and Bioelectronics
NanoGalaxy: Nanopore long-read sequencing data analysis in Galaxy
Willem de Koning, Milad Miladi, Saskia Hiltemann, Astrid P. Heikema, John Philip Hays, Stephan Flemming, Marius van den Beek, Dana A. M. Mustafa, Rolf Backofen, Björn Andreas Grüning et al. · 2020 · GigaScience
Recent advances in the analysis of 5-methylcytosine and its oxidation products
Bi‐Feng Yuan, Yu‐Qi Feng · 2013 · TrAC Trends in Analytical Chemistry
Epigenetic Optical Mapping of 5-Hydroxymethylcytosine in Nanochannel Arrays
Tslil Gabrieli, Hila Sharim, Gil Nifker, Jonathan Jeffet, Tamar Shahal, Rani Arielly, Michal Levy‐Sakin, Lily Hoch, Nissim Arbib, Yael Michaeli et al. · 2018 · ACS Nano
Label-free DNA methylation analysis using opto-fluidic ring resonators
Jonathan D. Suter, Daniel J. Howard, Huidong Shi, Charles W. Caldwell, Xudong Fan · 2010 · Biosensors and Bioelectronics
Bioinformatics Tools for Genome-Wide Epigenetic Research
Vladimir Espinosa Angarica, Antonio del Sol · 2017 · Advances in experimental medicine and biology
Epigenetics in Forest Trees
Mamadou Dia Sow, Isabel Allona, Christophe Ambroise, Daniel Conde, Régis Fichot, Svetlana Gribkova, Véronique Jorge, Grégoire Le Provost, Luc E. Pâques, Christophe Plomion et al. · 2018 · Advances in botanical research
Development of a metabolic pathway transfer and genomic integration system for the syngas-fermenting bacterium Clostridium ljungdahlii
Gabriele Philipps, Sebastian de Vries, Stefan Jennewein · 2019 · Biotechnology for Biofuels
Mapping chromatin modifications at the single cell level
Connor Ludwig, Lacramioara Bintu · 2019 · Development
BERT6mA: prediction of DNA N6-methyladenine site using deep learning-based approaches
Sho Tsukiyama, Md Mehedi Hasan, Hong‐Wen Deng, Hiroyuki Kurata · 2022 · Briefings in Bioinformatics
Moving Beyond DNA Sequence to Improve Plant Stress Responses
Faisal Saeed, Usman Khalid Chaudhry, Allah Bakhsh, Ali Raza, Yasir Saeed, Abhishek Bohra, Rajeev Kumar Varshney · 2022 · Frontiers in Genetics
DNA Sequencing by Hexagonal Boron Nitride Nanopore: A Computational Study
Liuyang Zhang, Xianqiao Wang · 2016 · Nanomaterials
Alterations of 5-Hydroxymethylcytosine in Human Cancers
Christopher J. Mariani, Jozef Madžo, Erika L. Moen, Ali E. Yesilkanal, Lucy A. Godley · 2013 · Cancers
DNA Methylation by Restriction Modification Systems Affects the Global Transcriptome Profile in Borrelia burgdorferi
Timothy Casselli, Yvonne Tourand, Adam Scheidegger, William K. Arnold, Anna Proulx, Brian Stevenson, Catherine Ayn Brissette · 2018 · Journal of Bacteriology
Phasevarions of bacterial pathogens – phase-variable epigenetic regulators evolving from restriction–modification systems
Zachary N. Phillips, Asma-Ul Husna, Michael P. Jennings, Kate L. Seib, John M. Atack · 2019 · Microbiology
Quantification and mapping of DNA modifications
Yi Dai, Bi‐Feng Yuan, Yu‐Qi Feng · 2021 · RSC Chemical Biology
Next-generation sequencing as an approach to dairy starter selection
Kelleher, Philip, Murphy, James, Mahony, Jennifer, van Sinderen, Douwe · 2015 · Dairy Science & Technology
Bacterial N4-methylcytosine as an epigenetic mark in eukaryotic DNA
Fernando Rodríguez, Irina A. Yushenova, DANIEL A. DICORPO, Irina R. Arkhipova · 2022 · Nature Communications
Exploring the crop epigenome: a comparison of DNA methylation profiling techniques
D. Agius, Aliki Kapazoglou, Evangelia V. Avramidou, Miroslav Baránek, Elena Carneros, Elena Caro, Stefano Castiglione, Angela Cicatelli, Aleksandra Radanović, Jean-Paul Ebejer et al. · 2023 · Frontiers in Plant Science
Application of next generation sequencing to molecular diagnosis of inherited diseases.
Wei Zhang, H. Cui, L. Wong · 2014 · Topics in current chemistry
Understanding posttraumatic stress disorder: insights from the methylome
Stefanie Malan‐Müller, Soraya Seedat, Sian M. J. Hemmings · 2013 · Genes Brain & Behavior
Detection of 5-methylcytosine and 5-hydroxymethylcytosine in DNA via host–guest interactions inside α-hemolysin nanopores
Tao Zeng, Lei Liu, Ting Li, Yuru Li, Juan Gao, Yuliang Zhao, Hai‐Chen Wu · 2015 · Chemical Science
A novel electrochemical immunosensor for the quantitative detection of 5-hydroxymethylcytosine in genomic DNA of breast cancer tissue
Zhiqing Yang, Wenjing Jiang, Fei Liu, Yunlei Zhou, Huanshun Yin, Shiyun Ai · 2015 · Chemical Communications
Single-Molecule Positioning in Zeromode Waveguides by DNA Origami Nanoadapters
Enrico Pibiri, Phil Holzmeister, Birka Lalkens, Guillermo P. Acuna, Philip Tinnefeld · 2014 · Nano Letters
Contribution of DNA adenine methylation to gene expression heterogeneity in Salmonella enterica
María Antonia Sánchez-Romero, David R. Olivenza, Gabriel Gutiérrez, Josep Casadesús · 2020 · Nucleic Acids Research
Towards DNA methylation detection using biosensors
Leila Syedmoradi, Fariba Esmaeili, Michael L. Norton · 2016 · The Analyst
Amperometric Bioplatforms To Detect Regional DNA Methylation with Single-Base Sensitivity
Eloy Povedano, Víctor Ruiz‐Valdepeñas Montiel, María Gamella, Marı́a Pedrero, Rodrigo Barderas, Alberto Peláez‐García, Marta Mendiola, David Hardisson, Jaime Feliú, Paloma Yáñez‐Sedeño et al. · 2020 · Analytical Chemistry
Detection of Cell Types Contributing to Cancer From Circulating, Cell-Free Methylated DNA
Megan E. Barefoot, Netanel Loyfer, Amber J. Kiliti, A. Patrick McDeed, Tommy Kaplan, Anton Wellstein · 2021 · Frontiers in Genetics
A mobile restriction–modification system provides phage defence and resolves an epigenetic conflict with an antagonistic endonuclease
Nils Birkholz, Simon A. Jackson, Robert D. Fagerlund, Peter C. Fineran · 2022 · Nucleic Acids Research
Synchronized long-read genome, methylome, epigenome and transcriptome profiling resolve a Mendelian condition
Mitchell Robert Vollger, Jonas Korlach, Kiara C. Eldred, Elliott G. Swanson, Jason G. Underwood, Stephanie C. Bohaczuk, Yizi Mao, Yong-Han Hank Cheng, Jane E. Ranchalis, Elizabeth Blue et al. · 2025 · Nature Genetics
AutoFE-Pointer: Auto-weighted feature extractor based on pointer network for DNA methylation prediction
Xin Feng, Ruihao Xin, Jiezhang Wu, Jiaxin Zheng, Chenyan Wang, Cuinan Yu · 2025 · International Journal of Biological Macromolecules
The complete methylome of Helicobacter pylori UM032
Woon Ching Lee, Brian P. Anton, Susana Wang, Primo A. Baybayan, Siddarth Singh, Meredith Ashby, Eng Guan Chua, Chin Yen Tay, Fanny Thirriot, Mun Fai Loke et al. · 2015 · BMC Genomics