Direct selection of human genomic loci by microarray hybridization
Albert, Thomas J, Molla, Michael N, Muzny, Donna M, Nazareth, Lynne, Wheeler, David, Song, Xingzhi, Richmond, Todd A, Middle, Chris M +4 more·2007·Nature Methods
Cited by (682)
Items 301–400 of 682
- Molecular characterization of a long range haplotype affecting protein yield and mastitis susceptibility in Norwegian Red cattleMarte Sodeland, Harald Grove, Matthew Kent, Simon Taylor, Morten Svendsen, Ben J. Hayes, Sigbjørn Lien · 2011 · BMC Genetics
- Clinical exome sequencing in neurogenetic and neuropsychiatric disordersBrent L. Fogel, Hane Lee, Samuel P. Strom, Joshua L. Deignan, Stanley F. Nelson · 2015 · Annals of the New York Academy of Sciences
- Photolithographic Synthesis of High-Density DNA and RNA Arrays on Flexible, Transparent, and Easily Subdivided Plastic SubstratesMatthew T. Holden, Matthew C. D. Carter, Cheng‐Hsien Wu, Jamison D. Wolfer, Eric Codner, Michael R. Sussman, David M. Lynn, Lloyd M. Smith · 2015 · Analytical Chemistry
- Mechanisms of genetic regulation in gene expression: examples from drug metabolizing enzymes and transportersDylan M. Glubb, Federico Innocenti · 2010 · WIREs Systems Biology and Medicine
- Reduced-representation methylation mappingJeffrey A. Jeddeloh, John M. Greally, Oliver J. Rando · 2008 · Genome biology
- The LuWD40-1 Gene Encoding WD Repeat Protein Regulates Growth and Pollen Viability in Flax (Linum Usitatissimum L.)Santosh Kumar, Mark C. Jordan, Raju Datla, Sylvie Cloutier · 2013 · PLoS ONE
- Next-Generation Mapping of Complex Traits with Phenotype-Based Selection and IntrogressionEric J. Earley, Corbin D. Jones · 2011 · Genetics
- Finishing the finished human chromosome 22 sequenceCharlotte G. Cole, Owen T McCann, John E Collins, Karen L. Oliver, David L. Willey, Susan M. Gribble, Fengtang Yang, Karen McLaren, Jane Rogers, Zemin Ning et al. · 2008 · Genome biology
- Haplotype sorting using human fosmid clone end-sequence pairsJeffrey M. Kidd, Z. Cheng, Tina Graves, Bob Fulton, Richard K. Wilson, Evan E. Eichler · 2008 · Genome Research
- Gene Saturation: An Approach to Assess Exploration Stage of Gene Interaction NetworksZiqiao Yin, Binghui Guo, Zhilong Mi, Jiahui Li, Zhiming Zheng · 2019 · Scientific Reports
- Homozygosity mapping with SNP arrays confirms 3p21 as a recessive locus for gray platelet syndrome and narrows the interval significantlyShay Fabbro, Walter H.A. Kahr, Jesse D. Hinckley, Kai Wang, Jack Moseley, Gi‐Yung Ryu, Brie Nixon, James G. White, Thomas Bair, Brian C. Schutte et al. · 2011 · Blood
- High-throughput sequencing of microdissected chromosomal regionsAnja Weise, Bernd Timmermann, Manfred G. Grabherr, Martin Werber, Patricia Cristine Heyn, Nadezda Kosyakova, Thomas Liehr, Heidemarie Neitzel, Kateryna Konrat, Christiane Bommer et al. · 2009 · European Journal of Human Genetics
- Next Generation Sequencing in the Clinical Domain: Clinical Advantages, Practical, and Ethical ChallengesRose Thompson, Cheney J. G. Drew, Rhys Huw Thomas · 2012 · Advances in protein chemistry and structural biology
- Multiplex Chromosomal Exome Sequencing Accelerates Identification of ENU-Induced Mutations in the MouseMiao Sun, Kajari Mondal, Viren Patel, Vanessa L. Horner, Alyssa Bushey Long, David J. Cutler, Tamara Caspary, Michael E. Zwick · 2012 · G3 Genes Genomes Genetics
- Design and development of exome capture sequencing for the domestic pig (Sus scrofa)Christelle Robert, Pablo Fuentes‐Utrilla, K. Troup, Julia Loecherbach, Frances S Turner, Richard Talbot, Alan L. Archibald, Alan J. Mileham, Nader Deeb, David Arthur Hume et al. · 2014 · BMC Genomics
- Target enrichment improves phylogenetic resolution in the genus Zanthoxylum (Rutaceae) and indicates both incomplete lineage sorting and hybridization eventsNiklas Reichelt, Jun Wen, Claudia Paetzold, Marc S. Appelhans · 2021 · Annals of Botany
- Efficient oligonucleotide probe selection for pan-genomic tiling arraysAdam M. Phillippy, Xiangyu Deng, Wei Zhang, Steven L. Salzberg · 2009 · BMC Bioinformatics
- Linkage analysis and the study of Mendelian disease in the era of whole exome and genome sequencingM. Dawn Teare, Mauro Santibanez‐Koref · 2014 · Briefings in Functional Genomics
- Evaluation of human gene variant detection in amplicon pools by the GS-FLX parallel PyrosequencerRoberta Bordoni, Raoul J.P. Bonnal, Ermanno Rizzi, Paola Carrera, Sara Benedetti, Laura Cremonesi, Stefania Stenirri, Alessio Colombo, Cristina Montrasio, Sara Bonalumi et al. · 2008 · BMC Genomics
- A probabilistic approach for SNP discovery in high-throughput human resequencing dataRose Hoberman, Joana Dias, Bing Ge, Eef Harmsen, Michael B. Mayhew, Dominique J. Verlaan, Tony Kwan, Ken Dewar, Mathieu Blanchette, Tomi Pastinen · 2009 · Genome Research
- Physical and Chemicals Mutagenesis in Plant BreedingSouleymane Bado, Brian Peter Forster, Fatemeh Maghuly · 2023 · Springer eBooks
- Chromosome genomics uncovers plant genome organization and functionJana Zwyrtková, Hana Šimková, Jaroslav Doležel · 2020 · Biotechnology Advances
- PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identificationFaouzi Jaziri, Nicolas Parisot, A. Abid, Jérémie Denonfoux, Céline Ribière, Cyrielle Gasc, Delphine Boucher, Jean‐François Brugère, Antoine Mahul, David R.C. Hill et al. · 2014 · Database
- Mendelian, Non-Mendelian, Multigenic Inheritance, and EpigeneticsTamar Harel, Davut Pehli̇van, C. Thomas Caskey, James R. Lupski · 2014 · Elsevier eBooks
- Developmental Genetics and New Sequencing Technologies: The Rise of Nonmodel OrganismsBeth A. Rowan, Detlef Weigel, Daniel Koenig · 2011 · Developmental Cell
- Practical, ethical and regulatory considerations for the evolving medical and research genomics landscapeGholson J. Lyon, Jeremy P. Segal · 2013 · Applied & Translational Genomics
- Genetic etiologic analysis in 74 Chinese Han women with idiopathic premature ovarian insufficiency by combined molecular genetic testingJiandong Shen, Dianyun Qu, Yan Gao, Fangxi Sun, Jiazi Xie, Xueping Sun, Dao Wu Wang, Xiang Ma, Yugui Cui, Jiayin Liu et al. · 2021 · Journal of Assisted Reproduction and Genetics
- Emerging technologies for prenatal diagnosis: The application of whole genome and RNA sequencingPengfei Liu, Liesbeth Vossaert · 2022 · Prenatal Diagnosis
- New technologies in the genetic approach to sudden cardiac death in the youngMarı́a Brión, Inés Quintela, Beatriz Sobrino, Maria Luisa Torres, Catarina Allegue, Ángel Carracedo · 2010 · Forensic Science International
- Sequence Capture and Next-Generation Resequencing of Multiple Tagged Nucleic Acid Samples for Mutation Screening of Urea Cycle DisordersUrsula Amstutz, Gisela Andrey, Dominic Suciu, Rolf B. Jaggi, Johannes Häberle, Carlo Rodolfo Largiadèr · 2010 · Clinical Chemistry
- Capturing Darwin's dreamTravis C. Glenn, Brant C. Faircloth · 2016 · Molecular Ecology Resources
- Genomic sequence capture of haemosporidian parasites: Methods and prospects for enhanced study of host–parasite evolutionLisa N. Barrow, Julie M. Allen, Xi Huang, Staffan Bensch, Christopher C. Witt · 2018 · Molecular Ecology Resources
- Capturing prokaryotic dark matter genomesCyrielle Gasc, Céline Ribière, Nicolas Parisot, Réjane Beugnot, Clémence Defois, Corinne Biderre‐Petit, Delphine Boucher, Éric Peyretaillade, Pierre Peyret · 2015 · Research in Microbiology
- Clinical Versus Research SequencingYuriy Shevchenko, Sherri J. Bale · 2016 · Cold Spring Harbor Perspectives in Medicine
- Targeted sequencing of the human X chromosome exomeKajari Mondal, Amol Carl Shetty, Viren Patel, David J. Cutler, Michael E. Zwick · 2011 · Genomics
- A bioinformatic platform to integrate target capture and whole genome sequences of various read depths for phylogenomicsPedro G. Ribeiro, María Fernanda Torres Jiménez, Tobias Andermann, Alexandre Antonelli, Christine D. Bacon, Pável F. Matos‐Maraví · 2021 · Molecular Ecology
- Advances in sarcoma molecular diagnosticsXue Q. Wang, Angela Goytain, Brendan Craig Dickson, Torsten O. Nielsen · 2022 · Genes Chromosomes and Cancer
- Benefits and Limits of Phasing Alleles for Network Inference of Allopolyploid ComplexesGeorge P. Tiley, Andrew A. Crowl, Paul S. Manos, Emily B. Sessa, Claudia Solís‐Lemus, Anne D. Yoder, J. Gordon Burleigh · 2024 · Systematic Biology
- SNP Discovery by Transcriptome PyrosequencingW. Brad Barbazuk, Patrick S. Schnable · 2011 · Methods in molecular biology
- Next-generation sequencing approaches for genetic mapping of complex diseasesFerrán Casals, Youssef Idaghdour, Julie Hussin, Philip Awadalla · 2012 · Journal of Neuroimmunology
- Sequence capture and massively parallel sequencing to detect mutations associated with malignant hyperthermiaAnja H. Schiemann, E.M. Dürholt, Neil Pollock, Kathryn M. Stowell · 2012 · British Journal of Anaesthesia
- Auditory and Vestibular Research2008 · Methods in molecular biology
- Sequence capture across large phylogenetic scales by using pooled PCR‐generated baits: A case study of LepidopteraYuan Clare Zhang, Shaohong Deng, Dan Liang, Peng Zhang · 2019 · Molecular Ecology Resources
- Rapid identification of heterozygous mutations in Drosophila melanogaster using genomic capture sequencingHui Wang, Abanti Chattopadhyay, Zhe Li, Bryce Daines, Yumei Li, Chunxu Gao, Richard A. Gibbs, Kun Zhang, Rui Chen · 2010 · Genome Research
- Exon capture and bulk segregant analysis: rapid discovery of causative mutations using high-throughput sequencingFlorencia Del Viso, Dipankan Bhattacharya, Yong Kong, Michael J. Gilchrist, Mustafa Kezar Khokha · 2012 · BMC Genomics
- Aiming off the target: recycling target capture sequencing reads for investigating repetitive DNALucas George Assunção Costa, André Marques, Christopher Evan Buddenhagen, William Wayt Thomas, Bruno Hüettel, Veit Schubert, Steven Dodsworth, Andreas Houben, Gustavo Souza, Andrea Pedrosa‐Harand · 2021 · Annals of Botany
- 161st ENMC International Workshop on nemaline myopathy and related disorders, Newcastle upon Tyne, 2008Nigel G. Laing, Carina Wallgren‐Pettersson · 2009 · Neuromuscular Disorders
- Bisulfite Methylation Profiling of Large GenomesJon Reinders, Jerzy Paszkowski · 2010 · Epigenomics
- The evolving role of next generation sequencing in myelodysplastic syndromesTravis P. Spaulding, Shannon Somer Stockton, Michael Robert Savona · 2019 · British Journal of Haematology
- Fine Mapping of Quantitative Trait Loci on Bovine Chromosome 6 Affecting Calving DifficultyHanne Gro Olsen, T.H.E. Meuwissen, H. Nilsen, M. Svendsen, Sigbjørn Lien · 2008 · Journal of Dairy Science
- Multiplex target capture with double-stranded DNA probesPeidong Shen, Wenyi Wang, Aung-Kyaw Chi, Yu Fan, Ronald Wayne Davis, Curt Scharfe · 2013 · Genome Medicine
- Sanger Sequencing Principles, History, and LandmarksC. Alexander Valencia, M. Ali Pervaiz, Ammar Husami, Yaping Qian, Kejian Zhang · 2013 · SpringerBriefs in genetics
- Solution-based targeted genomic enrichment for precious DNA samplesAiden Eliot Shearer, Michael S. Hildebrand, Richard JH Smith · 2012 · BMC Biotechnology
- Genomic medicine and neurological diseasePhilip M. Boone, W. Wiszniewski, J. Lupski · 2011 · Human Genetics
- Dynamic Magnetic Nanomixers for Improved Microarray Assays by Eliminating Diffusion LimitationQirong Xiong, An Eng Lim, Yun Lim, Yee Cheong Lam, Hongwei Duan · 2018 · Advanced Healthcare Materials
- Maximizing Ion-Tagged Oligonucleotide Loading on Magnetic Ionic Liquid Supports for the Sequence-Specific Extraction of Nucleic AcidsKevin D. Clark, Chenghui Zhu, Jared L. Anderson · 2019 · Analytical Chemistry
- Whole human exome capture for high-throughput sequencingDae-Won Kim, Seong-Hyeuk Nam, Ryong Nam Kim, Sang-Haeng Choi, Hong-Seog Park · 2010 · Genome
- Adult Genetic Risk ScreeningC. Thomas Caskey, Manuel L. Gonzalez‐Garay, Stacey Pereira, Amy L. McGuire · 2013 · Annual Review of Medicine
- Targeted sequencing with microfluidicsEwen F. Kirkness · 2009 · Nature Biotechnology
- Detection of Genomic Variation by Selection of a 9 Mb DNA Region and High Throughput SequencingSergey I. Nikolaev, Christian Iseli, Andrew J. Sharp, Daniel Robyr, Jacques Rougemont, Corinne Gehrig, Laurent Farinelli, Stylianos E. Antonarakis · 2009 · PLoS ONE
- A comparison of whole genome sequencing with exome sequencing for family-based association studiesSean Lacey, Jaeyoon Chung, Honghuang Lin · 2014 · BMC Proceedings
- Sequencing by Cyclic Ligation and Cleavage (CycLiC) directly on a microarray captured templateKalim U. Mir, Hong Qi, Oleg V. Salata, Giuseppe Scozzafava · 2008 · Nucleic Acids Research
- A regression model for estimating DNA copy number applied to capture sequencing dataGuillem J. Rigaill, Sidney Cadot, Roelof J.C. Kluin, Zheng Xue, René Bernards, Ian J. Majewski, Lodewyk F.A. Wessels · 2012 · Bioinformatics
- Target enrichment sequencing in cultivated peanut (Arachis hypogaea L.) using probes designed from transcript sequencesZe Peng, Wen Fan, Liping Wang, Dev Paudel, Dante Leventini, Barry L. Tillman, Jianping Wang · 2017 · Molecular Genetics and Genomics
- Next‐generation sequencing approaches in genetic rodent model systems to study functional effects of human genetic variationVictor Guryev, Edwin P. J. G. Cuppen · 2009 · FEBS Letters
- Technological advances in DNA sequence enrichment and sequencing for germline genetic diagnosisC. Ku, Meng-Chu Wu, D. Cooper, N. Naidoo, Y. Pawitan, B. Pang, B. Iacopetta, R. Soong · 2012 · Expert Review of Molecular Diagnostics
- Genomics and epigenomics: new promises of personalized medicine for cancer patientsMichal R. Schweiger, Christian Barmeyer, Bernd Timmermann · 2013 · Briefings in Functional Genomics
- Enrichment of low abundance DNA/RNA by oligonucleotide-clicked iron oxide nanoparticlesFereshte Damavandi, Weiwei Wang, Wei‐Zheng Shen, Sibel Çetinel, Tracy Jordan, Juan Jovel, Carlo David Montemagno, Gane Ka‐Shu Wong · 2021 · Scientific Reports
- What we have learned from the next-generation sequencing: Contributions to the genetic diagnoses and understanding of pathomechanisms of neurodegenerative diseasesYo‐Tsen Liu, Yi‐Chung Lee, Bing‐Wen Soong · 2015 · Journal of Neurogenetics
- Reliable resequencing of the human dystrophin locus by universal long polymerase chain reaction and massive pyrosequencing.R. Bonnal, M. Severgnini, A. Castaldi, R. Bordoni, M. Iacono, A. Trimarco, A. Torella, G. Piluso, S. Aurino, G. Condorelli et al. · 2010 · Analytical Biochemistry
- Targeted Enrichment of Specific Regions in the Human Genome by Array HybridizationCatherine Igartua, Emily H. Turner, Sarah Boon Hsi Ng, Emily C. Hodges, Gregory J. Hannon, Arindam Bhattacharjee, Mark J. Rieder, Deborah A. Nickerson, Jay Shendure · 2010 · Current Protocols in Human Genetics
- The Promise and Practicality of Population Genomics Research with Endangered SpeciesGeorge H. Perry · 2013 · International Journal of Primatology
- Clinical genomics: from a truly personal genome viewpointJ. Lupski · 2016 · Human Genetics
- Development of Target Sequence Capture and Estimation of Genomic Relatedness in a Mixed Oak StandIsabelle Lesur, Hermine Alexandre, Christophe Boury, Émilie Chancerel, Christophe Plomion, Antoine Kremer · 2018 · Frontiers in Plant Science
- Genetics of Chronic Obstructive Pulmonary Disease: A Succinct Review, Future Avenues and Prospective Clinical ApplicationsYohan Bossé · 2009 · Pharmacogenomics
- Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individualsHarshaVardhan Doddapaneni, Sara Javornik Cregeen, Richard Sucgang, Qingchang Meng, Xiang Qin, Vasanthi Avadhanula, Hsu Chao, Vipin K. Menon, Erin G. Nicholson, David Morgan Henke et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
- ConcatSeq: A method for increasing throughput of single molecule sequencing by concatenating short DNA fragmentsUlrich Schlecht, Janine Mok, Carolina Dallett, Jan Berka · 2017 · Scientific Reports
- Next generation sequencing in cardiomyopathy: towards personalized genomics and medicineAmitabh Biswas, Vadlamudi Raghavendra Rao, Sandeep Seth, SK Maulik · 2014 · Molecular Biology Reports
- Combining Microarray‐based Genomic Selection (MGS) with the Illumina Genome Analyzer Platform to Sequence Diploid Target RegionsDavid T. Okou, Adam E. Locke, Karyn Meltz Steinberg, Katie R. Hagen, Prashanth Athri, Amol Carl Shetty, Viren Patel, Michael E. Zwick · 2009 · Annals of Human Genetics
- Empirical Evaluation of Oligonucleotide Probe Selection for DNA MicroarraysJennifer Gladys Mulle, Viren C. Patel, Stephen T. Warren, Madhuri Hegde, David J. Cutler, Michael E. Zwick · 2010 · PLoS ONE
- Current status and future possibilities of molecular genetics techniques in Brassica napusMuhammad Afzal, Salem Safer Alghamdi, Muhammad Habib ur Rahman, Awais Ahmad, Tahir Farooq, Mukhtar Alam, Imtiaz Ali Khan, Hidayat Ullah, Wajid Nasim, Shah Fahad · 2018 · Biotechnology Letters
- Identification of Causal Sequence Variants of Disease in the Next Generation Sequencing EraChristopher B. Kingsley · 2010 · Methods in molecular biology
- Evolutionary history of Methyltransferase 1 genes in hexaploid wheatMélanie Thomas, Lise Pingault, Axel Poulet, Jorge Duarte, Mickaël Throude, Sébastien Faure, Jean-Philippe Pichon, Etienne Paux, Aline V. Probst, Christophe Tatout · 2014 · BMC Genomics
- LIFE‐Seq: a universal L arge I ntegrated DNA F ragment E nrichment Seq uencing strategy for deciphering the transgene integration of genetically modified organismsHanwen Zhang, Rong Li, Yongkun Guo, Yuchen Zhang, Dabing Zhang, Litao Yang · 2022 · Plant Biotechnology Journal
- Rapid and highly-specific generation of targeted DNA sequencing libraries enabled by linking capture probes with universal primersJoel Pel, Amy Leung, Wendy W. Y. Choi, Milenko Despotovic, W. Lloyd Ung, Gosuke Shibahara, Laura Gelinas, Andre Marziali · 2018 · PLoS ONE
- Increasing the specificity and function of DNA microarrays by processing arrays at different stringenciesMartin Dufva, Jesper Petersen, Lena Poulsen · 2009 · Analytical and Bioanalytical Chemistry
- An improved understanding of cancer genomics through massively parallel sequencing.Jamie K. Teer · 2014 · PubMed
- Identifying markers for resistance to sugarcane orange rust (Puccinia kuehnii) via selective genotyping and capture sequencingPer H. McCord, Neil C. Glynn, Jack C. Comstock · 2019 · Euphytica
- Sequencing Genomes: From Individuals to PopulationsKalim U. Mir · 2009 · Briefings in Functional Genomics and Proteomics
- Applications of Microarrays for Crop Improvement: Here, There, and EverywhereDavid W. Galbraith, Jeremy D. Edwards · 2010 · BioScience
- NewtCap : An Efficient Target Capture Approach to Boost Genomic Studies in Salamandridae (True Salamanders and Newts)Manon Chantal de Visser, James France, Evan McCartney‐Melstad, Gary M. Bucciarelli, Anagnostis Theodoropoulos, Howard Bradley Shaffer, Ben Wielstra · 2025 · Ecology and Evolution
- A massive parallel sequencing workflow for diagnostic genetic testing of mismatch repair genesMaren F. Hansen, Ulrike Neckmann, Liss Anne Solberg Lavik, Trine Vold, Bodil Gilde, Ragnhild K. Toft, Wenche Sjursen · 2014 · Molecular Genetics & Genomic Medicine
- microDuMIP: target-enrichment technique for microarray-based duplex molecular inversion probesJung-Ki Yoon, Jinwoo Ahn, Han Sang Kim, Soo Min Han, Hoon Sik Jang, Min Goo Lee, Ji Hyun Lee, Duhee Bang · 2014 · Nucleic Acids Research
- The Role and Future Possibilities of Next-Generation Sequencing in Studying Microbial DiversityVijay Nema · 2018 · Elsevier eBooks
- Impact of Mendelian Inheritance in Cardiovascular DiseaseK. McBride, V. Garg · 2010 · Annals of the New York Academy of Sciences
- Targeted deep resequencing of the human cancer genome using next-generation technologiesSamuel Myllykangas, Hanlee P. Ji · 2010 · Biotechnology and Genetic Engineering Reviews
- A Comprehensive Genetic Analysis of Candidate Genes Regulating Response to Trypanosoma congolense Infection in MiceIan Goodhead, Alan L. Archibald, Peris Wanza Amwayi, Andy Brass, John P. Gibson, Neil Hall, MARGARET A. HUGHES, Moses Limo, Fuad A. Iraqi, Stephen J. Kemp et al. · 2010 · PLoS neglected tropical diseases
- Experiences with array-based sequence capture; toward clinical applicationsRowida Almomani, Jaap van der Heijden, Yavuz Ariyürek, Yuching Lai, Egbert Bakker, Michiel van Galen, Martijn H. Breuning, Johan T. den Dunnen · 2010 · European Journal of Human Genetics
- 454 life sciences: illuminating the future of genome sequencing and personalized medicine.Kristin L. Patrick · 2007 · PubMed Central
- Concurrent typing of over 4000 samples by long-range PCR amplicon-based NGS and rSSO revealed the need to verify NGS typing for HLA allelic dropoutsDenice Kong, Nancy Lee, Imma Donna Dela Cruz, Charlyn Dames, Stalinraja Maruthamuthu, Todd Rabkin Golden, Raja Rajalingam · 2021 · Human Immunology