Digitally encoded DNA nanostructures for multiplexed, single-molecule protein sensing with nanopores

Bell, Nicholas A. W., Keyser, Ulrich F.·2016·Nature Nanotechnology

Cited by (345)

Items 301–345 of 345

  1. Probing when dCas9 tolerates DNA mismatches
    Weihua Guan · 2023 · Nature Biomedical Engineering
  2. Nanopore sensitization based on a double loop hybridization chain reaction and G-quadruplex
    Yanru Li, Chunmiao Yu, Yesheng Wang, Jin Zheng Yu, Huaning Wang, Bingling Li · 2024 · Chemical Communications
  3. Simultaneous Detection of Multiple Biomarkers by Peptide Nucleic Acids‐Based Triplex Molecular Beacon in a Nanopore
    Bingyuan Guo, Yun Zhang, Qianyuan Ren, Ke Zhou, Lei Liu, Hai‐Chen Wu · 2024 · Analysis & Sensing
  4. Nano Trees: nanopore signal processing and sublevel fitting using decision trees
    Deekshant Wadhwa, Philipp Mensing, James L. Harden, Paula Branco, Vincent Tabard‐Cossa, Kyle Briggs · 2025 · Digital Discovery
  5. Oligonucleotide-Directed Protein Threading Through a Rigid Nanopore
    Garbiñe Celaya, David Rodríguez‐Larrea · 2020 · Methods in molecular biology
  6. Bioanalytical Chemistry, Biosensors
    Jian‐Hui Jiang, Hao Tang · 2015 · Wiley eBooks
  7. New Sensing Technologies: Nanopore Sensing
    Jiye Fu, Linlin Wu, Guohao Xi, Jing Tu · 2021 · Elsevier eBooks
  8. Aptamer-functionalized nanopore for the detection of closely-related proteins
    Lucile Reynaud · 2020
  9. Lysenin Channels as Single Molecule Nano-Sensors and Nano-Switches for Controlled Membrane Permeability
    Nisha Shrestha · 2017
  10. Bayesian inference for nanopore data analysis
    Niklas Ermann, Kaikai Chen, Ulrich F. Keyser · 2019 · arXiv (Cornell University)
  11. A Confined Nanopipette: From Fundamental to Application
    Ru‐Jia Yu, Yongxu Hu, Si‐Min Lu, Suwen Xu, Yao Lin, Yi‐Lun Ying, Yi‐Tao Long · 2020 · Royal Society of Chemistry eBooks
  12. Solid-state Nanopore Confinement for Single Molecule Detection
    Yao Lin, Qiao Li, Shao-Chuang Liu, Si‐Min Lu, Yi‐Lun Ying, Yi‐Tao Long · 2020 · Royal Society of Chemistry eBooks
  13. Bioanalytical Chemistry, Biosensors
    Jian‐Hui Jiang, Hao Tang · 2018 · Wiley eBooks
  14. DNA as a Self-programming Module for Nanodesigns
    2021 · Royal Society of Chemistry eBooks
  15. Real-time detection of dopamine -- aptamer interactions in a nanopore: a label-free toolkit for study of nucleic-acid-based molecular sensors.
    George Rugare Chingarande · 2021
  16. Drilling accurate nanopores for biosensors by energetic multi-wall carbon nanotubes: a molecular dynamics investigation
    Changsheng Li, Zilin Wang, Lei Ma · 2022 · Journal of Molecular Modeling
  17. Real-time controlling a single DNA in hotspot for back-and-forth programmable site-specified SERS characterizations in solution
    Wenhao Fu, Xin Dai, King Wai Chiu, Vince St. Dollente Mesias, Hongni Zhu, Wei Liu, Jinqing Huang · 2023 · Research Square
  18. Multiplexed Digital Characterisation of Misfolded Protein Oligomers via Solid-State Nanopores
    Sarah E. Sandler, Robert I. Horne, Sara Rocchetti, Robert W. Novak, Nai‐Shu Hsu, Marta Castellana-Cruz, Z. Faidon Brotzakis, Rebecca C. Gregory, Sean Chia, Gonçalo J. L. Bernardes et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  19. Stacking effects on mutation detection by T4 DNA ligation within dimeric DNA origami triangle barcodes for single-molecule nanopore analysis
    Dorothy Aboagye-Mensah, Samuel Confederat, Fahad Alammar, Lekshmi Kailas, Abimbola Feyisara Adedeji Olulana, Alex Stopar, Allen W. Nicholson, Neil H. Thomson, Paolo Actis, Matteo Castronovo · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  20. Modular RNA:DNA nanostructures enable nanopore profiling of ribosomal RNA processing and rRNA variants
    Filip Bošković, Sarah E. Sandler, Simon Brauburger, Yuan Shui, Bhavik Kumar, Joana Pereira Dias, Plamena Naydenova, Jinbo Zhu, Stephen G. Baker, Ulrich F. Keyser · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  21. Differentiating amino acids from nanopore sequencing
    Jiahao Zhang, Jia Meng, Yuxin Zhang · 2024 · International Conference on Bioinformatics and Biomedical Technology (ICBBT)
  22. Accurate Molecular Sensing based on a Modular and Customizable CRISPR/Cas‐Assisted Nanopore Operational Nexus (CANON)
    Huaning Wang, Rujian Zhao, Bing Zhang, Yao Xiao, Chunmiao Yu, Yesheng Wang, Chunxu Yu, Yidan Tang, Yanru Li, Baiyang Lu et al. · 2025 · Angewandte Chemie
  23. 3659 DNA nanotechnology for drug delivery
    Natalia Navarro, Carme Fàbrega, Ramón Eritja · 2025 · De Gruyter eBooks
  24. Supramolecular Interactions Modulate RNA:DNA Folding Observed via Nanopore Sensing
    Thieme T. Schmidt, Max K. Earle, Gerardo Patiño‐Guillén, Yunxuan Li, Raluca‐Elena Alexii, Jeremy J. Baumberg, Ulrich F. Keyser, Casey M. Platnich · 2025 · Angewandte Chemie
  25. Resolution Enhancement of Nanopore Molecular Assay Based on the Repeating Sequences-Duplex Polymerization Strategy, a Kind of “Self-Tag” Strategy
    Bing Zhang, Huaning Wang, Yidan Tang, Bingling Li, Xiurong Yang · 2025 · Analytical Chemistry
  26. Decoding noise in nanofluidic systems: Adsorption vs diffusion signatures in power spectra
    Anna Drummond Young, Alice L. Thorneywork, Sophie Marbach · 2025 · The Journal of Chemical Physics
  27. Nanopore-Based Profiling of PEGylation in Nucleic Acid Therapeutics
    Gerardo Patiño‐Guillén, Thieme T. Schmidt, Jeremy J. Baumberg, Jack W. Szostak, Ulrich F. Keyser, Filip Bošković · 2026 · Journal of the American Chemical Society
  28. 29.3 A 256-Channel Event-Driven Readout for Solid-State Nanopore Single-Molecule Sensing with 193pArms Noise in a 1MHz Bandwidth
    Sander Crols, Carolina Mora López, Filip Tavernier, Marian Verhelst, Nick Van Helleputte · 2026 · Digest of technical papers/Digest of technical papers - IEEE International Solid-State Circuits Conference
  29. Visualizing and Quantifying microRNA‐Induced DNA Origami Separation at the Nanoscale
    Chalmers Chi Cheng Chau, Varun Gupta, George R. Heath, Ch. Wälti, Paolo Actis · 2026 · Angewandte Chemie
  30. Nanoscale electrophoresis of biomolecules
    Shakila H. Peli Thanthri, Suresh Shivanka, Indu A. Chandrasoma, Maximillian I. Chibuike, Steven A. Soper · 2026 · Elsevier eBooks
  31. Multiplexed electrochemical immunosensors modified with Ni and Co particles for the determination of cardiac troponin C in samples of clinical and biological interest
    Luiz Otávio Orzari, Jéssica Rocha Camargo, Bruno C. Janegitz · 2026 · Microchemical Journal
  32. Harnessing CRISPR and Nanopore Systems for Advanced Biosensing: A Review
    Stephan V. M. W. Boteju, Cherie S. Tan, Dong Ming · 2026 · IEEE Sensors Journal
  33. DNA origami snaps into place
    Kerstin Göpfrich · 2026 · Science Robotics
  34. Encoded DNA Nanoswitch Array for Multiplexed MicroRNA Profiling via Nanopore Readout
    Zhaowei Guan, Jiahuan Sun, Jingyuan Zhao, Li Wang, Hong Yuan, Jinbo Zhu · 2026 · Analytical Chemistry
  35. Pushing the Analytical Limits of Graphene Nanopores for Single-Molecule Protein Sensing: Noise Budgets, Transport Physics, and AI Decoding
    Yingying Jiang, 郑多楷, Huan Fang, Xinyi Li, Yong Hu · 2026 · Analytical Chemistry
  36. Fixed Aptamer-Functionalized DNA Carriers for Protein Detection with Movable Nanopores
    Helena Miljkovic, Wayne Yang, Aleksandra Rađenović · 2026 · Methods in molecular biology
  37. Preparation and Detection of Designed DNA Carriers for Nanopore Sensing
    Yaxian Liu, Chengwei Luo, Ran Ji, Yufei Li, Yuxia Nie, Zemin Zhou, Rui Hu, Kaikai Chen · 2026 · Methods in molecular biology
  38. The Power of Pristine Interfaces: Unmodified Glass Nanopores for Nucleic Acid Analysis
    Zhaowei Guan, Dezhi Feng, Jinbo Zhu · 2026 · Small Methods
  39. Quad-Nanopore Geometry Modulates Non-Markov DNA Transport Dynamics via Electric-Field Coupling
    Yanrong Chen, Yingzhuang Ma, Zhan Wang, 刘业翔, Ke Jiao, Lifeng Tian, Rui Hu, Qing Zhao · 2026 · Journal of Analysis and Testing
  40. Nontraditional molecular-bit DNA storage
    Xin Liu, Ranfeng Wu, Yuan Liang, Yucong Gong, Yongpeng Zhang, Cheng Zhang · 2026 · Chinese Science Bulletin (Chinese Version)
  41. Solid-state nanopore sensing: the next workhorse of biophysical characterization
    Casey M. Platnich, Raluca‐Elena Alexii, Ulrich F. Keyser · 2026 · Nature Methods
  42. Electrolyte debye length-controlled charge modulation at the real first interface for ionic current regulation in nanochannel biosensors
    Daisan Zha, Defang Ding, Xueqin Luo, Ying Chen, Meihua Lin, Yu Huang, Fan Xia · 2026 · Sensors and Actuators B Chemical
  43. Near-exact resistance of an orifice in a 2D membrane blocked by a cylindrical obstruction
    Martin Charron, Vincent Tabard‐Cossa · 2026 · Applied Physics Letters
  44. Advanced Nucleic Acid Architectures: Classification, Assembly Mechanisms, and Biomedical Applications
    Yan Liu, Caiyun Zhao, Chengke Zhao, Siying Li, Chang Xu, Han Wu, Xiaojing Pei, Hong Meng · 2026 · Pharmaceutics
  45. Probe‐Free, Primer‐Programmed Amplicon Encoding Enables Nanopore‐Based Multiplex Detection With Deep Learning Decoding
    Md. Ahasan Ahamed, Muhammad Asad Ullah Khalid, Wahid Uz Zaman, Anthony J. Politza, Weihua Guan · 2026 · Advanced Science