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Bicoid signal extraction: Another powerful approach

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Deep Learning Benchmarks on L1000 Gene Expression Data

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Genomewide Analysis of Secretory Activation in Mouse Models

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Biomarker clustering to address correlations in proteomic data

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Illustrations on Using the Distribution of a P-value in High Dimensional Data Analyses.

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Identification of the Molecular Subgroups in Idiopathic Pulmonary Fibrosis by Gene Expression Profiles

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Constructing Endophenotypes of Complex Diseases Using Non-Negative Matrix Factorization and Adjusted Rand Index

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The Utility of Gene Expression Profiling from Tissue Samples to Support Drug Safety Assessments

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Challenges and Approaches to Statistical Design and Inference in High-Dimensional Investigations

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Interval estimation in a finite mixture model: Modeling -values in multiple testing applications

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Identification and functional validation of therapeutic targets for malignant melanoma

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Highly accurate two-gene signature for gastric cancer

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Estimating differential expression from multiple indicators

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Probing differentially expressed genes against a microarray database forin silicosuppressor/enhancer and inhibitor/activator screens

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The most informative spacing test effectively discovers biologically relevant outliers or multiple modes in expression

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Microarray Data Analysis for Transcriptome Profiling

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The Current Status of DNA Microarrays

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Introduction to the Statistical Analysis of Two-Color Microarray Data

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The “Window t test”: a simple and powerful approach to detect differentially expressed genes in microarray datasets

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Application of microarray outlier detection methodology to psychiatric research

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Finding rule groups to classify high dimensional gene expression datasets

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Validation of Transcriptomics-Based In Vitro Methods

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Using DNA Microarrays to Assay Part Function

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Using microarrays to study the microenvironment in tumor biology: The crucial role of statistics

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Assessing Statistical Significance in Microarray Experiments Using the Distance Between Microarrays

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Fish toxicogenomics

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Stochastic Resonance Reveals “Pilot Light” Expression in Mammalian Genes

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Proteomic and morphological divergence in micro-allopatric morphotypes of Melarhaphe neritoides in the absence of genetic differentiation

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Differential expression profile of long non‐coding RNA in cardiomyocytes autophagy induced by angiotensin II

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Registered Report: Transcriptional Analysis of Savings Memory Suggests Forgetting is Due to Retrieval Failure

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Deciphering Macromolecular Interactions Involved in Abiotic Stress Signaling: A Review of Bioinformatics Analysis

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Integrative set enrichment testing for multiple omics platforms

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Important options available — from start to finish — for translating proteomics results to clinical chemistry

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Gene Expression Profiling of Dendritic Cells in Different Physiological Stages under Cordyceps sinensis Treatment

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An Integrated Reaction-Transport Model for DNA Surface Hybridization: Implications for DNA Microarrays

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Functional genomics and networks: new approaches in the extraction of complex gene modules

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Priorities to Overcome Barriers Impacting Data Science Application in Emergency Care Research

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Effect of landiolol on sex-related transcriptomic changes in the myocardium during sepsis

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Unique age-related transcriptional signature in the nervous system of the long-lived red sea urchin Mesocentrotus franciscanus

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Optimized Ranking and Selection Methods for Feature Selection with Application in Microarray Experiments

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VisHiC--hierarchical functional enrichment analysis of microarray data

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GPU acceleration for statistical gene classification

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How Golden is Silence? Teaching Undergraduates the Power and Limits of RNA Interference

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Chondrocyte genomics: implications for disease modification in osteoarthritis

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Introduction to the Development and Validation of Predictive Biomarker Models from High-Throughput Data Sets

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Gene Expression Analysis: Current Methods

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Gene-expression profiles of abdominal perivascular adipose tissue distinguish aortic occlusive from stenotic atherosclerotic lesions and denote different pathogenetic pathways

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The impact of molecular biology on drug discovery

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Cellular transcriptomics – the next phase of endocrine expression profiling

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Deep learning benchmarks on L1000 gene expression data

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Blood transcriptomic analysis reveals a distinct molecular subtype of treatment resistant depression compared to non-treatment resistant depression

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Integration of Data from Omic Studies with the Literature-Based Discovery towards Identification of Novel Treatments for Neovascularization in Diabetic Retinopathy

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New insights into the Manila clam – Perkinsus olseni interaction based on gene expression analysis of clam hemocytes and parasite trophozoites through in vitro challenges

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SNAT1 and a family with high rates of suicidal behavior

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A Hypothesis Test for Equality of Bayesian Network Models

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Pediatric asthma and autism—genomic perspectives

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RNA Biosignatures in Adolescent Patients in a Pediatric Emergency Department With Pelvic Inflammatory Disease

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Integration and Weighing of Omics Data for Obesity

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RNA sequencing reveals niche gene expression effects of beta-hydroxybutyrate in primary myotubes

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Deep sequencing-based expression transcriptional profiling changes during Brucella infection

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Model validation for gene selection and regulation maps

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Distinct leaf litter drive the fungal communities in Panax ginseng-growing soil

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Available Software for Meta-Analyses of Genome-Wide Expression Studies

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Altered mRNA Expression of Genes Involved in Endocannabinoid Signalling in Squamous Cell Carcinoma of the Oral Tongue

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Interactive Bicluster Aggregation in Bipartite Graphs

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DNA Microarrays in Biological Discovery and Patient Care

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The use of gene expression datasets in feature selection research: 20 years of inherent bias?

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Comprehensive Analysis of Non-Small-Cell Lung Cancer Microarray Datasets Identifies Several Prognostic Biomarkers

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Systems biology and its impact on anti-infective drug development

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An Omics Strategy for Discovering Pulmonary Biomarkers Potentially Relevant to the Evaluation Of Tobacco products

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Novel statistical framework to identify differentially expressed genes allowing transcriptomic background differences

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Multigene Sets for Clinical Application in Glioma

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Selection and Validation of Reference Genes for Gene Expression Studies Using Quantitative Real-Time PCR in Prunus Necrotic Ringspot Virus-Infected Cucumis sativus

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Pattern Browsing and Query Adjustment for the Exploratory Analysis and Cooperative Visualisation of Microarray Time-Course Data

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Cancer class prediction: Two stage clustering approach to identify informative genes

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Measuring molecular biomarkers in epidemiologic studies: laboratory techniques and biospecimen considerations

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Single assay-wide variance experimental (SAVE) design for high-throughput screening

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Preprocessing Steps for Agilent MicroRNA Arrays: Does the Order Matter

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The MicroArray Quality Control (MAQC) Project and Cross-Platform Analysis of Microarray Data

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Attenuated behaviour in Cornelia de Lange and fragile X syndromes

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Allogenic Faecal Microbiota Transfer Induces Immune-Related Gene Sets in the Colon Mucosa of Patients with Irritable Bowel Syndrome

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Molecular Mechanisms Underlying the Acclimation of Chlamydomonas reinhardtii Against Nitric Oxide Stress

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Cross model validated feature selection based on gene clusters

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Attractive Feature Reduction Approach for Colon Data Classification

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Hybridization of Electrodeposited Magnetic Multilayer Micropillars

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Autonomous Self‐Evolving Research on Biomedical Data: The DREAM Paradigm

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Integrated pathway-based transcription regulation network mining and visualization based on gene expression profiles

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Data recovery and integration from public databases uncovers transformation-specific transcriptional downregulation of cAMP-PKA pathway-encoding genes

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Identification of early responsive genes in human amnion epithelial FL cells induced by N-methyl-N′-nitro-N-nitrosoguanidine using oligonucleotide microarray and quantitative real-time RT-PCR approaches

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Identification of pathway-based prognostic gene signatures in patients with multiple myeloma

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Microarray analysis of aging-associated immune system alterations in the rostral ventrolateral medulla of F344 rats

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Developing prognostic gene panel of survival time in lung adenocarcinoma patients using machine learning

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Pyroptosis-Related Signatures for Predicting Prognosis in Breast Cancer

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FDR-FET: an optimizing gene set enrichment analysis method

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