Genetics of global gene expression
DOI 10.1038/nrg1964
Cited by (599)
Items 201–300 of 599
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- Tissue‐dependent limited pleiotropy affects gene expression in barleyElena Potokina, Arnis Druka, Zewei Luo, Matthew Moscou, Roger P. Wise, Robbie Waugh, Mike J. Kearsey · 2008 · The Plant Journal
- Sasquatch: predicting the impact of regulatory SNPs on transcription factor binding from cell- and tissue-specific DNase footprintsSchwessinger, Ron, Suciu, Maria C., McGowan, Simon J., Telenius, Jelena, Taylor, Stephen, Higgs, Doug R., Hughes, Jim R. · 2017 · Genome Research
- Maximizing the Utility of Cancer Transcriptomic DataYu Xiang, Youqiong Ye, Zhao Zhang, Leng Han · 2018 · Trends in cancer
- Protein-species quantitative venomics: looking through a crystal ballJuan J. Calvete, Daniel Petras, Francisco Calderón‐Celis, Bruno Lomonte, Jorge Ruíz Encinar, Alfredo Sanz‐Medel · 2017 · The Journal of venomous animals and toxins including tropical diseases
- Drosophila melanogaster as a model for lead neurotoxicology and toxicogenomics researchHelmut V. B. Hirsch, Gregory A. Lnenicka, Debra R. Possidente, Bernard P. Possidente, Mark D. Garfinkel, Luan Wang, Xiangyi Lu, Douglas Mark Ruden · 2012 · Frontiers in Genetics
- Systems genetics, bioinformatics and eQTL mappingHong Li, Hongwen Deng · 2010 · Genetica
- Allelic imbalance (AI) identifies novel tissue-specificcis-regulatory variation for humanUGT2B15Chang Sun, Catherine Southard, David Witonsky, Olufunmilayo Ibironke Olopade, Anna Di Rienzo · 2009 · Human Mutation
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- Disease-specific eQTL screening reveals an anti-fibrotic effect of AGXT2 in nonalcoholic fatty liver diseaseTaekyeong Yoo, S. Joo, Hyo Jung Kim, Hyun Young Kim, H. Sim, Jieun Lee, Hee-Hoon Kim, Sunhee Jung, Youngha Lee, O. Jamialahmadi et al. · 2021 · bioRxiv
- De novo Transcriptome Assembly of Phomopsis liquidambari Provides Insights into Genes Associated with Different Lifestyles in Rice (Oryza sativa L.)Jun Zhou, Xin Li, Yan Chen, Chuan‐Chao Dai · 2017 · Frontiers in Plant Science
- Computational Analysis of Whole-Genome Differential Allelic Expression Data in HumanJames R. Wagner, Bing Ge, Dmitry Pokholok, Kevin L. Gunderson, Tomi Pastinen, Mathieu Blanchette · 2010 · PLoS Computational Biology
- Allele-specific expression and genetic determinants of transcriptomic variations in response to mild water deficit in tomato.Elise Albert, R. Duboscq, Muriel Latreille, S. Santoni, Matthieu Beukers, J. Bouchet, F. Bitton, J. Gricourt, C. Poncet, V. Gautier et al. · 2018 · The Plant Journal
- Genome-wide patterns of regulatory divergence revealed by introgression linesRafael F. Guerrero, Matthew W. Hahn, Leonie C. Moyle, Amanda L. Posto · 2016 · Evolution
- Elucidating Molecular Networks That Either Affect or Respond to Plasma Cortisol Concentration in Target Tissues of Liver and MuscleSiriluck Ponsuksili, Yang Du, Eduard Muráni, M. Schwerin, Klaus Wimmers · 2012 · Genetics
- Inferring regulatory mechanisms from patterns of evolutionary divergenceItay Tirosh, Naama Barkai · 2011 · Molecular Systems Biology
- Sex-specific gene expression in the BXD mouse liverDaniel M. Gatti, Ni Zhao, Elissa J. Chesler, Blair U. Bradford, Andrey A. Shabalin, Roumyana Yordanova, Lu Lu, Ivan Rusyn · 2010 · Physiological Genomics
- Genome-wide allele- and strand-specific expression profilingJ. Gagneur, Himanshu Sinha, F. Perocchi, Richard Bourgon, Wolfgang Huber, Lars M. Steinmetz · 2009 · Molecular Systems Biology
- Overexpression of native Saccharomyces cerevisiae ER-to-Golgi SNARE genes increased heterologous cellulase secretionJ. V. Van Zyl, R. den Haan, W. V. van Zyl · 2015 · Applied Microbiology and Biotechnology
- Using Expression Genetics to Study the Neurobiology of Ethanol and AlcoholismSean P. Farris, Aaron R. Wolen, Michael F. Miles · 2010 · International review of neurobiology
- Systems genetics in “-omics” era: current and future developmentHong Li · 2012 · Theory in Biosciences
- Fine mapping of regulatory loci for mammalian gene expression using radiation hybridsChristopher C. Park, Sangtae Ahn, J. Bloom, Andy Lin, Richard T. Wang, Tongtong Wu, Aswin Sekar, Arshad H. Khan, C. Farr, A. Lusis et al. · 2008 · Nature Genetics
- Aggregative trans-eQTL analysis detects trait-specific target gene sets in whole bloodDiptavo Dutta, Yuan Ming He, Ashis Saha, Marios Arvanitis, Alexis J. Battle, Nilanjan Chatterjee · 2022 · Nature Communications
- Functional mapping of drug response with pharmacodynamic-pharmacokinetic principles.K. Ahn, Jiang-Tao Luo, Arthur Berg, D. Keefe, Rong-Ling Wu · 2010 · TIPS - Trends in Pharmacological Sciences
- Genome-wide association studies identify the role of caspase-9 in kidney diseaseTomohito Doke, Shizheng Huang, Chengxiang Qiu, Xin Sheng, Matthew J. Seasock, Hongbo Liu, Ziyuan Ma, Matthew Palmer, Katalin Suszták · 2021 · Science Advances
- A gain-of-function single nucleotide variant creates a new promoter which acts as an orientation-dependent enhancer-blockerYavor K. Bozhilov, D. Downes, J. Telenius, A. M. Oudelaar, Emmanuel N. Olivier, J. Mountford, J. Hughes, R. Gibbons, D. Higgs · 2021 · Nature Communications
- Expression QTL (eQTLs) Analyses Reveal Candidate Genes Associated With Fruit Flesh Softening Rate in Peach [Prunus persica (L.) Batsch]Tomás Carrasco-Valenzuela, Claudia Muñoz-Espinoza, Aníbal Riveros, Romina Pedreschi, Pere Arús, Reinaldo Campos‐Vargas, Claudio Meneses · 2019 · Frontiers in Plant Science
- MeQTL analysis of childhood obesity links epigenetics with a risk SNP rs17782313 near MC4R from meta-analysisYuping Tang, Bo Jin, Lingling Zhou, Weifeng Lu · 2016 · Oncotarget
- Integrative Analysis Using Module-Guided Random Forests Reveals Correlated Genetic Factors Related to Mouse WeightZheng Chen, Weixiong Zhang · 2013 · PLoS Computational Biology
- Brain expression quantitative trait locus mapping informs genetic studies of psychiatric diseasesChunyu Liu · 2011 · Neuroscience Bulletin
- The evolution of genetic architectures underlying quantitative traitsÉtienne Rajon, Joshua B. Plotkin · 2013 · Proceedings of the Royal Society B Biological Sciences
- Future of Osteoporosis Genetics: Enhancing Genome-Wide Association StudiesCharles R. Farber, Aldons Jake Lusis · 2009 · Journal of Bone and Mineral Research
- Making the right connections: biological networks in the light of evolutionKnight Cg, John W. Pinney · 2009 · BioEssays
- Perspectives on Ecological and Evolutionary Systems BiologyChristina L. Richards, Yoshie Hanzawa, Manpreet Singh Katari, Ian M. Ehrenreich, Kathleen E. Engelmann, Michael D. Purugganan · 2009 · Wiley-Blackwell eBooks
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- Modeling the evolution of complex genetic systems: The gene network family treeJanna L. Fierst, Patrick C. Phillips · 2014 · Journal of Experimental Zoology Part B Molecular and Developmental Evolution
- Exploiting Gene Expression Variation to Capture Gene-Environment Interactions for DiseaseYoussef Idaghdour, Philip Awadalla · 2013 · Frontiers in Genetics
- Computational Tools for Discovery and Interpretation of Expression Quantitative Trait LociFred A. Wright, Andrey A. Shabalin, Ivan Rusyn · 2012 · Pharmacogenomics
- Use of Functional Genomics to Identify Candidate Genes Underlying Human Genetic Association Studies of Vascular DiseasesXia Yang · 2012 · Arteriosclerosis Thrombosis and Vascular Biology
- Genome‐wide analysis of transcriptomic divergence between laboratory colony and field Anopheles gambiae mosquitoes of the M and S molecular formsRuth Aguilar, Frédéric Simard, Colince Kamdem, Tim Shields, Gregory E. Glass, Lindsey S. Garver, George Dimopoulos · 2010 · Insect Molecular Biology
- The association between gene SNPs and cancer predisposition: Correlation or causality?Huan Tan · 2017 · EBioMedicine
- Dissection of expression‐quantitative trait locus and allele specificity using a haploid/diploid plant system – insights into compensatory evolution of transcriptional regulation within populationsJukka‐Pekka Verta, Christian R. Landry, John J. MacKay · 2016 · New Phytologist
- Comparative transcriptomics and gene expression in larval tiger salamander (Ambystoma tigrinum) gill and lung tissues as revealed by pyrosequencingSoo Hyung Eo, Jacqueline M. Doyle, Matthew C. Hale, Nicholas J. Marra, Joseph D. Ruhl, J. Andrew DeWoody · 2011 · Gene
- Comprehensive analysis of Arabidopsis expression level polymorphisms with simple inheritanceStéphanie Plantegenet, Johann Weber, Darlene R Goldstein, Georg Zeller, Cindy Nussbaumer, Jérôme Thomas, Detlef Weigel, Keith Harshman, Christian S. Hardtke · 2009 · Molecular Systems Biology
- Transcriptome resilience predicts thermotolerance in Caenorhabditis elegansK. Jovic, J. Grilli, M. Sterken, Basten L. Snoek, J. Riksen, S. Allesina, J. Kammenga · 2019 · BMC Biology
- The Future is The Past: Methylation QTLs in SchizophreniaAnke Hoffmann, Michael J. Ziller, Dietmar Spengler · 2016 · Genes
- Identification of Quantitative Trait Loci (QTLs) in Aquaculture SpeciesMuhammad Younis Laghari, Punhal Lashari, Yan Zhang, Xiaowen Sun · 2014 · Reviews in Fisheries Science & Aquaculture
- Development of gene-specific markers for acid soil/aluminium tolerance in barley (Hordeum vulgare L.)Miao Bian, Irene Waters, Sue Broughton, Xiaoqi Zhang, Meixue Zhou, Reg Lance, Dongfa Sun, Chengdao Li · 2013 · Molecular Breeding
- Lack of association of vitamin D receptor gene 3′‐haplotypes with psoriasis in Croatian patientsIvana Ručević, Mario Štefanić, Stana Tokić, Melita Vukšić, Ljubica Glavaš‐Obrovac, Vladimira Barišić-Druško · 2011 · The Journal of Dermatology
- Genomic analysis of the relationship between gene expression variation and DNA polymorphism in Drosophila simulansMara Lawniczak, Alisha K. Holloway, David J Begun, Corbin D. Jones · 2008 · Genome biology
- Intra- and inter-individual genetic differences in gene expressionMark J. Cowley, Chris J. Cotsapas, Rohan B. H. Williams, Eva K.F. Chan, Jeremy N. Pulvers, Michael Y. Liu, Oscar Junhong Luo, David John Nott, Peter Little · 2008 · Nature Precedings
- Genetics of murine type 2 diabetes and comorbiditiesIqbal M. Lone, Fuad A. Iraqi · 2022 · Mammalian Genome
- Ecological Speciation Promoted by Divergent Regulation of Functional Genes Within African Cichlid FishesMadeleine Carruthers, Duncan E. Edgley, Andrew D. Saxon, Nestory Peter Gabagambi, Asilatu Shechonge, Eric Alexander Miska, Richard Michael Durbin, Jon R. Bridle, George F. Turner, Martin J. Genner · 2022 · Molecular Biology and Evolution
- Adaptive divergence generates distinct plastic responses in two closely related Senecio speciesGreg M. Walter, James W. Clark, A. Cristaudo, Delia Terranova, B. Nevado, S. Catara, M. Paunov, V. Velikova, D. Filatov, S. Cozzolino et al. · 2020 · bioRxiv
- WormQTL2: an interactive platform for systems genetics in Caenorhabditis elegansBasten L. Snoek, M. Sterken, Margi Hartanto, Albert-Jan van Zuilichem, J. Kammenga, D. de Ridder, H. Nijveen · 2019 · bioRxiv
- Association of autoimmune hepatitis with Src homology 2 adaptor protein 3 gene polymorphisms in Japanese patientsT. Umemura, S. Joshita, H. Hamano, K. Yoshizawa, S. Kawa, E. Tanaka, M. Ota · 2017 · Journal of Human Genetics
- Genome-Wide Gene/Genome Dosage Imbalance Regulates Gene Expressions in Synthetic Brassica napus and Derivatives (AC, AAC, CCA, CCAA)Chen Tan, Q. Pan, C. Cui, Y. Xiang, Xian-Hong Ge, Zaiyun Li · 2016 · Frontiers in Plant Science
- eSNPO: An eQTL-based SNP Ontology and SNP functional enrichment analysis platformJin Li, Limei Wang, Tao Jiang, Jizhe Wang, Xue Li, Xiaoyan Liu, Chunyu Wang, Zhixia Teng, Ruijie Zhang, Hongchao Lv et al. · 2016 · Scientific Reports
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- Evaluating the Performance of Widely Used Phylogenetic Models for Gene Expression EvolutionJ. Dimayacyac, Shanyun Wu, D. Jiang, Matt Pennell · 2023 · bioRxiv
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- Overexpression of Scg5 increases enzymatic activity of PCSK2 and is inversely correlated with body weight in congenic miceCharles R. Farber, James Lee Chitwood, Sang‐Nam Lee, Ricardo A. Verdugo, Alma Islas‐Trejo, Gonzalo Rincón, Iris Lindberg, Juan F F Medrano · 2008 · BMC Genetics
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- A Genomewide Integrative Analysis of GWAS and eQTLs Data Identifies Multiple Genes and Gene Sets Associated with ObesityLi Liu, Qianrui Fan, Feng Zhang, Xiong Guo, Xiao Liang, Yanan Du, Ping Li, Yan Fei Wen, Jingcan Hao, Wenyu Wang et al. · 2018 · BioMed Research International
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