Role of priority effects in the early-life assembly of the gut microbiota

The “Golden Age” of Probiotics: A Systematic Review and Meta-Analysis of Randomized and Observational Studies in Preterm Infants

Dermyshi, E., Wang, Y., Yan, C., Hong, W., Qiu, G., Gong, X., & Zhang, T. (2017) · Neonatology · doi:10.1159/000454668 · Cited by 24,586

An obesity-associated gut microbiome with increased capacity for energy harvest

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A core gut microbiome in obese and lean twins

Turnbaugh, P. J., Hamady, M., Yatsunenko, T., Cantarel, B. L., Duncan, A., Ley, R. E., Sogin, M. L., Jones, W. J., Roe, B. A., Affourtit, J. P., et al. (2009) · Nature · doi:10.1038/nature07540 · Cited by 7,823

Human gut microbiome viewed across age and geography

Yatsunenko, T., Rey, F. E., Manary, M. J., Trehan, I., Dominguez-Bello, M. G., Contreras, M., Magris, M., Hidalgo, G., Baldassano, R. N., Anokhin, A. P., et al. (2012) · Nature · doi:10.1038/nature11053 · Cited by 7,815

The Unified Neutral Theory of Biodiversity and Biogeography

Jetschke, G., & Hubbell, S. P. (2002) · Ecology · doi:10.2307/3071998 · Cited by 5,699

Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns

Dominguez-Bello, M. G., Costello, E. K., Contreras, M., Magris, M., Hidalgo, G., Fierer, N., & Knight, R. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1002601107 · Cited by 4,774

Intestinal microbiota metabolism of l-carnitine, a nutrient in red meat, promotes atherosclerosis

Koeth, R. A., Wang, Z., Levison, B. S., Buffa, J. A., Org, E., Sheehy, B. T., Britt, E. B., Fu, X., Wu, Y., Li, L., et al. (2013) · Nature Medicine · doi:10.1038/nm.3145 · Cited by 4,386

Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

Ridaura, V. K., Faith, J. J., Rey, F. E., Cheng, J., Duncan, A. E., Kau, A. L., Griffin, N. W., Lombard, V., Henrissat, B., Bain, J. R., et al. (2013) · Science · doi:10.1126/science.1241214 · Cited by 3,788

Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life

Bäckhed, F., Roswall, J., Peng, Y., Feng, Q., Jia, H., Kovatcheva-Datchary, P., Li, Y., Xia, Y., Xie, H., Zhong, H., et al. (2015) · Cell Host & Microbe · doi:10.1016/j.chom.2015.04.004 · Cited by 3,315

The Unified Neutral Theory of Biodiversity and Biogeography

Jetschke, G. (2002) · Ecology · doi:10.1890/0012-9658(2002)083[1771:tuntob]2.0.co;2 · Cited by 3,285

Stool Dynamics and the Developing Gut Microbiome During Infancy

Al-Andoli, M., Schoch, S. F., Markovic, A., Mühlematter, C., Beaugrand, M., Jenni, O. G., Liamlahi, R., Walser, J., Nielsen, D. S., & Kurth, S. (2026) · Journal of Biological Rhythms · doi:10.1177/07487304251407313 · Cited by 2

Comprehensive Analysis of the Microbiome and Metabolome: Unveiling Interactions Between Intestinal Flora and Metabolites in Schizophrenia

Chen, L., Li, W., Mo, D., Meng, X., Yao, L., Zhang, X., & Liu, H. (2025) · Neuropsychiatric Disease and Treatment · doi:10.2147/ndt.s523570 · Cited by 2

Maternal and infant gut microbiome

Wang, H., Tin, F., Chen, H., Jiao, F., Wu, M., Sun, S., Lin, L., Li, D., Zheng, H., Niu, Z., et al. (2026) · iMeta · doi:10.1002/imt2.70151 · Cited by 2

Future Therapeutic Prospects in Dealing with Autoimmune Diseases: Treatment Based on the Microbiome Model

Tsigalou, C., Konstantinidis, T., Aloizou, A., Bezirtzoglou, E., & Tsakris, A. (2022) · Springer eBooks · doi:10.1007/978-981-19-4800-8_25 · Cited by 2

Milk mineral composition is strongly associated with the human milk microbiome

Leyva, L. L., González, E., Maurice, C. F., & Koski, K. G. (2025) · Frontiers in Nutrition · doi:10.3389/fnut.2025.1550292 · Cited by 2

Sea Urchin Larvae (Strongylocentrotus purpuratus) Select and Maintain a Unique Microbiome Compared to Environmental Sources

French, K. B., Herrera, M. J., & German, D. P. (2024) · Biological Bulletin · doi:10.1086/736931 · Cited by 2

Toward a porcine in vivo model to analyze the pathogenesis of TLR5-dependent enteropathies

Pieper, R., van Best, N., van Vorst, K., Ebner, F., Reißmann, M., Hornef, M. W., & Fulde, M. (2020) · Gut Microbes · doi:10.1080/19490976.2020.1782163 · Cited by 2

The Mighty Microbiota: Regulator of the Human Body

Gupta, P. (2021) · Clinical Research and Clinical Trials · doi:10.31579/2693-4779/048 · Cited by 2

Microbes, human milk, and prebiotics

Kujawska, M., Collado, M. C., & Hall, L. J. (2020) · Elsevier eBooks · doi:10.1016/b978-0-12-818097-6.00009-2 · Cited by 1

The effect of induced changes in gut microbiota on fish performance

Deng, Y. (2022) · doi:10.18174/559128 · Cited by 2

Extensive inheritance of gut microbial communities in a superorganismal termitePreprint

Sinotte, V. M., Renelies‐Hamilton, J., Andreu‐Sánchez, S., Vasseur-Cognet, M., & Poulsen, M. (2022) · Research Square · doi:10.21203/rs.3.rs-1978279/v1 · Cited by 2

The Intestine Is an Important Hub for Development and Regulation of Innate and Adaptive Immunity

Conte, M. L., & Montini, F. (2025) · The microbiomes of humans, animals, plants, and the environment · doi:10.1007/978-3-031-84065-4_1 · Cited by 2

Experimental systems are essential for strengthening ecological modeling of microbiomes beyond observational data

Özkurt, E. (2025) · mSystems · doi:10.1128/msystems.01745-24 · Cited by 2

Applicability of synthetic communities of the infant gut microbiota to understand microbial dynamics in an interchanging glycan landscape

Ioannou, A., & Belzer, C. (2025) · Current Opinion in Microbiology · doi:10.1016/j.mib.2025.102659 · Cited by 1

Nested ecologies of childhood: A microbial turn in developmental theory

Millei, Z., Lee, N. M., Alminde, S., Breinholt, A., Grönroos, M., Hohti, R., Keto, S., Roslund, M. I., Spyrou, S., Tammi, T., et al. (2026) · Journal of Childhood Education & Society · doi:10.37291/2717638x.202671712 · Cited by 1

Prebiotics partially protect offspring from maternal antibiotic-induced obesity risk by altering maternal milk microbiota and gut colonization in Sprague-Dawley rats

Lowry, D. E., Cho, N. A., Sampsell, K., Sales, K. M., Tuplin, E. W. N., Biddle, M. S., Wang, W., Chleilat, F., Chow, M. R., Buzatto, A. Z., et al. (2026) · The Journal of Nutritional Biochemistry · doi:10.1016/j.jnutbio.2026.110337 · Cited by 1

The perinatal microbiota in dogs and cats: a narrative review from human research to veterinary practice

Banchi, P., Mila, H., Selma‐Royo, M., Tal, S., Péron, F., & Gaillard, V. (2026) · Frontiers in Veterinary Science · doi:10.3389/fvets.2026.1817504 · Cited by 1

Longitudinal dynamics and characterization of discriminative taxa in fecal microbiota of suckling and weaned piglets

Song, B., Yang, S., Yang, B., Xu, Z., Deng, F., & Li, Y. P. (2026) · Frontiers in Microbiology · doi:10.3389/fmicb.2026.1783640 · Cited by 1

Early supplementation with live combined Bacillus subtilis and Enterococcus faecium: association with feeding intolerance and gut microbiota composition in antibiotic-exposed preterm infants

Ye, C., Li, L., Zhang, H., Lyu, Q., Xu, Y., & Li, Y. (2026) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2026.1826157 · Cited by 1

Fermented corn germ meal modulates intestinal inflammation and influences gut microbial succession in broiler chickens

Ji, X., He, B., Wang, L., Liu, K., Shi, J., Cheng, J., Song, D., Ma, H., Li, A., Qiao, L., et al. (2026) · Animal nutrition · doi:10.1016/j.aninu.2026.01.013 · Cited by 1

Gut microbiome–metabolome interactions during varied low-carbohydrate food consumption

Nearing, J. T., Kuntz, T., Perdomo, V., Nickols, W. A., Branck, T. A., Bhosle, A., Badri, D. V., Huttenhower, C., Jackson, M. I., & Thompson, K. N. (2026) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2533462123 · Cited by 1

Glucose dependent resistance associated with intestinal microbiota facilitate teleost to survive bacterial infection

Zhao, N., Liu, Y., Guo, J., Shen, Y., Zhang, B., & Li, J. (2024) · Aquaculture · doi:10.1016/j.aquaculture.2024.740865 · Cited by 1

Effects of parental care on skin microbial community composition in poison frogs

Fischer, M., Xue, K. S., Costello, E. K., Dvorak, M., Raboisson, G., Robaczewska, A., Caty, S. N., Relman, D. A., & O’Connell, L. A. (2025) · eLife · doi:10.7554/elife.103331.3 · Cited by 1

Role of oral-gut-brain axis in psychiatric and neurological disorders

Duan, Z.-M., & Wu, L.-F. (2024) · World Chinese Journal of Digestology · doi:10.11569/wcjd.v32.i12.878 · Cited by 1

Bayesian Sequential Pragmatic Cluster Randomized Clinical Trial Design for PrEventive Effect of MEditerranean Diet in Children: PEMED Trial Research Protocol

Azzolina, D., Auricchio, S., Greco, L., & Auricchio, R. (2025) · Journal of Clinical Medicine · doi:10.3390/jcm14010240 · Cited by 1

Key Drivers of Ecological Assembly in the Hindgut of Atlantic Cod (Gadus morhua) when Fed with a Macroalgal Supplemented diet – How Robust Is the Gut to Taxonomic Perturbation?Preprint

Keating, C., Bolton‐Warberg, M., Hinchcliffe, J., Davies, R., Whelan, S., Wan, A. H. L., FitzGerald, R. D., Davies, S. J., Smith, C. J., & Ijaz, U. Z. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.08.24.457479 · Cited by 1

Wolbachia interacts with the microbiome to shape fitness-associated traits during seasonal adaptation in Drosophila melanogasterPreprint

Henry, L. P., Fernandez, M., Wolf, S., & Ayroles, J. F. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.05.31.494239 · Cited by 1

Within-host adaptation alters priority effects within the phyllosphere microbiomePreprint

Debray, R., Conover, A. E., Zhang, X., Dewald-Wang, E. A., & Koskella, B. L. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.08.19.504580 · Cited by 1

Gut microbiota promotes enteroendocrine cell maturation and mitochondrial functionPreprint

Alsudayri, A., Perelman, S. V., Chura, A., Brewer, M., McDevitt, M., Drerup, C. M., & Ye, L. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.09.27.558332 · Cited by 1

The zebrafish gut microbiome influences benzo[a]pyrene developmental neurotoxicityPreprint

Stagaman, K., Alexiev, A., Sieler, M. J., Hammer, A. J., Kasschau, K. D., Truong, L., Tanguay, R. L., & Sharpton, T. J. (2024) · Research Square · doi:10.21203/rs.3.rs-3944268/v1 · Cited by 1

Coalescence of soil microbial communities: consequences, mechanisms, and influential factorsPreprint

Chen, D., Wang, Z., Chen, M., Liu, K., Liu, D., Cui, X., Xu, Z. H., Xue, K., Wang, Y., & Che, R. (2024) · Research Square · doi:10.21203/rs.3.rs-4024260/v1 · Cited by 1

Effects of parental care on skin microbial community composition in poison frogsPreprint

Fischer, M., Xue, K. S., Costello, E. K., Dvorak, M., Raboisson, G., Robaczewska, A., Caty, S. N., Relman, D. A., & O’Connell, L. A. (2025) · eLife · doi:10.7554/elife.103331 · Cited by 1

Effects of parental care on skin microbial community composition in poison frogsPreprint

Fischer, M., Xue, K. S., Costello, E. K., Dvorak, M., Raboisson, G., Robaczewska, A., Caty, S. N., Relman, D. A., & O’Connell, L. A. (2025) · eLife · doi:10.7554/elife.103331.2 · Cited by 1

Microbiota development and mucosal IgA responses during childhood in health and allergic disease

Dzidic, M. (2019) · RiuNet (Universitat Politècnica de València) · doi:10.4995/thesis/10251/125479

Development and dynamics of the normal gut microbiota

Olsson, L. M. (2020) · Gothenburg University Publications Electronic Archive (Gothenburg University)

Impact of perinatal factors on the maternal- neonatal microbiota and influence on health outcomes

Selma‐Royo, M. (2020) · doi:10.4995/thesis/10251/153159

Maternal Gut Microbes Contribute to Rapid Acquisition of Intestinal Microbiota and High-Altitude Adaptation of Pre-Weaning Yak CalvesPreprint

Zhang, J., Liang, Z., Kao, R. D., Han, J., Du, M., Ahmad, A. A., Wang, S., Salekdeh, G. H., Long, R., Yan, P., et al. (2021) · Research Square · doi:10.21203/rs.3.rs-170399/v1

Arthrose et microbiote intestinal

Binvignat, M., Sokol, H., Mariotti‐Ferrandiz, E., Berenbaum, F., & Sellam, J. (2021) · Revue du Rhumatisme Monographies · doi:10.1016/j.monrhu.2021.02.001

Inter-microbial relations shape the preterm gut

Licht, T. R. (2021) · Nature Microbiology · doi:10.1038/s41564-021-00883-2

Faculty Opinions recommendation of Initial soil microbiome composition and functioning predetermine future plant health.

Malone, J. G. (2020) · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature · doi:10.3410/f.736664134.793571907

Faculty Opinions recommendation of Gut microbiota and mucosal immunity in the neonate.

Hall, L. J. (2020) · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature · doi:10.3410/f.733665223.793574615

Ecological Dynamics Imposes Fundamental Challenges in Microbial Source TrackingPreprint

Wang, X., Wu, L. H., Dai, L., Yin, X., Zhang, T., Weiss, S. T., & Liu, Y. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.05.21.492809

Extensive inheritance of gut microbial communities in a superorganismal termitePreprint

Sinotte, V. M., Renelies‐Hamilton, J., Andreu‐Sánchez, S., Vasseur-Cognet, M., & Poulsen, M. (2023) · Research Square · doi:10.21203/rs.3.rs-1978279/v2

Life stage and vaccination shape the gut microbiome of hatchery-reared Atlantic salmon ( Salmo salar )Preprint

Andres, K. J., Liu, B., Johnson, L., Kapuscinski, K. L., Moerke, A. H., Ling, F., & Knouft, J. H. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.02.21.529474

Microbial dispersion in the human gut through the lens of fecal transplantPreprint

Algavi, Y. M., & Borenstein, E. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.08.29.555267

Metagenomics approaches for microbiome analysis

Hazarika, P., Chattopadhyay, I., Ghosh, S., Umpo, M., Choudhury, Y., & Sharma, I. (2024) · Elsevier eBooks · doi:10.1016/b978-0-323-98372-3.00003-4

Additional file 1 of GACNNMDA: a computational model for predicting potential human microbe-drug associations based on graph attention network and CNN-based classifier

Ma, Q., Tan, Y., & Wang, L. (2023) · Figshare · doi:10.6084/m9.figshare.22615340

Additional file 6 of GACNNMDA: a computational model for predicting potential human microbe-drug associations based on graph attention network and CNN-based classifier

Ma, Q., Tan, Y., & Wang, L. (2023) · Figshare · doi:10.6084/m9.figshare.22615355

Additional file 3 of GACNNMDA: a computational model for predicting potential human microbe-drug associations based on graph attention network and CNN-based classifier

Ma, Q., Tan, Y., & Wang, L. (2023) · Figshare · doi:10.6084/m9.figshare.22615346

Additional file 8 of GACNNMDA: a computational model for predicting potential human microbe-drug associations based on graph attention network and CNN-based classifier

Ma, Q., Tan, Y., & Wang, L. (2023) · Figshare · doi:10.6084/m9.figshare.22615361

Additional file 4 of GACNNMDA: a computational model for predicting potential human microbe-drug associations based on graph attention network and CNN-based classifier

Ma, Q., Tan, Y., & Wang, L. (2023) · Figshare · doi:10.6084/m9.figshare.22615349

Additional file 7 of GACNNMDA: a computational model for predicting potential human microbe-drug associations based on graph attention network and CNN-based classifier

Ma, Q., Tan, Y., & Wang, L. (2023) · Figshare · doi:10.6084/m9.figshare.22615358

Additional file 5 of GACNNMDA: a computational model for predicting potential human microbe-drug associations based on graph attention network and CNN-based classifier

Ma, Q., Tan, Y., & Wang, L. (2023) · Figshare · doi:10.6084/m9.figshare.22615352

Additional file 2 of GACNNMDA: a computational model for predicting potential human microbe-drug associations based on graph attention network and CNN-based classifier

Ma, Q., Tan, Y., & Wang, L. (2023) · Figshare · doi:10.6084/m9.figshare.22615343

GVNNVAE: A Novel Microbe-Drug Association Prediction Model based on an Improved Graph Neural Network and the Variational Auto-Encoder

Chen, Y., Zhang, Z., Liu, X., Zeng, B., & Wang, L. (2024) · Current Bioinformatics · doi:10.2174/0115748936331907240927141428

Effects of parental care on skin microbial community composition in poison frogsPreprint

Fischer, M., Xue, K. S., Costello, E. K., Dvorak, M., Raboisson, G., Robaczewska, A., Caty, S. N., Relman, D. A., & O’Connell, L. A. (2025) · eLife · doi:10.7554/elife.103331.1

Effect of Maternal Probiotic and Piglet Dietary Tryptophan Level on Performance and Piglet Intestinal Health Parameters Pre-Weaning

Kiernan, D. P., O’Doherty, J. V., Ryan, M. T., & Sweeney, T. (2025) · Microorganisms · doi:10.3390/microorganisms13061264

Microbial Network Stability and Stochastic Assembly Mediate Pathogen Resistance in Potato Rhizosphere Under Healthy Soil MicrobiomePreprint

Tang, Z., Tan, W., Weng, L., Yu, H., Fu, Q., & Lv, D. (2025) · SSRN Electronic Journal · doi:10.2139/ssrn.5348238

Early matrine intervention of gut microbiota for type 2 diabetes prevention

Sun, Z., Lyu, H., Xu, H., Qin, X., & Li, W. (2025) · iMetaOmics. · doi:10.1002/imo2.70046

The gut microbiota of two rodents varies over fine spatial scales yet is minimally influenced by the environmental microbiotaPreprint

Figueiredo, A. R. T., Wanelik, K. M., Quicray, M., Lamberth, C., Raulo, A., & Knowles, S. C. L. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.09.07.673794

Infant gut microbiota in multi-child families converges with adults without a sibling-specific signaturePreprint

Hanski, E., Ponsero, A. J., Kolho, K., de Vos, W. M., & Salonen, A. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.10.31.685886

Priority effects determine community composition at the strain level in the honeybee gut microbiotaPreprint

Prasad, A., Santos-Matos, G., Szigeti, A., Mazel, F., & Engel, P. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.11.22.689826

Additional file 4 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435887

Additional file 5 of Perinatal environment shapes microbiota colonization and infant growth: impact on host response and intestinal function

Selma-Royo, M., Calatayud Arroyo, M., García‐Mantrana, I., Parra-Llorca, A., Escuriet, R., Martínez‐Costa, C., & Collado, M. C. (2020) · Figshare · doi:10.6084/m9.figshare.13278689

Additional file 5 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435890

Additional file 2 of Perinatal environment shapes microbiota colonization and infant growth: impact on host response and intestinal function

Selma-Royo, M., Calatayud Arroyo, M., García‐Mantrana, I., Llorca, A. P., Escuriet, R., Martínez‐Costa, C., & Collado, M. C. (2020) · Figshare · doi:10.6084/m9.figshare.13278680

Additional file 5 of Parental care contributes to vertical transmission of microbes in a skin-feeding and direct-developing caecilian

Kouete, M. T., Bletz, M. C., LaBumbard, B. C., Woodhams, D. C., & Blackburn, D. C. (2024) · Figshare · doi:10.6084/m9.figshare.26589546

Additional file 9 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435902

Additional file 7 of Parental care contributes to vertical transmission of microbes in a skin-feeding and direct-developing caecilian

Kouete, M. T., Bletz, M. C., LaBumbard, B. C., Woodhams, D. C., & Blackburn, D. C. (2024) · Figshare · doi:10.6084/m9.figshare.26589552

Additional file 9 of Parental care contributes to vertical transmission of microbes in a skin-feeding and direct-developing caecilian

Kouete, M. T., Bletz, M. C., LaBumbard, B. C., Woodhams, D. C., & Blackburn, D. C. (2024) · Figshare · doi:10.6084/m9.figshare.26589558

Additional file 3 of Hen raising helps chicks establish gut microbiota in their early life and improve microbiota stability after H9N2 challenge

Li, X., Bi, R., Xiao, K., Roy, A., Zhang, Z., Chen, X., Peng, J., Wang, R., Yang, R., Shen, X., et al. (2022) · Figshare · doi:10.6084/m9.figshare.19028964

Additional file 6 of Parental care contributes to vertical transmission of microbes in a skin-feeding and direct-developing caecilian

Kouete, M. T., Bletz, M. C., LaBumbard, B. C., Woodhams, D. C., & Blackburn, D. C. (2024) · Figshare · doi:10.6084/m9.figshare.26589549

Additional file 12 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435875

Additional file 12 of Perinatal environment shapes microbiota colonization and infant growth: impact on host response and intestinal function

Selma-Royo, M., Calatayud Arroyo, M., García‐Mantrana, I., Parra-Llorca, A., Escuriet, R., Martínez‐Costa, C., & Collado, M. C. (2020) · Figshare · doi:10.6084/m9.figshare.13278671

Additional file 1 of Perinatal environment shapes microbiota colonization and infant growth: impact on host response and intestinal function

Selma-Royo, M., Calatayud Arroyo, M., García‐Mantrana, I., Llorca, A. P., Escuriet, R., Martínez‐Costa, C., & Collado, M. C. (2020) · Figshare · doi:10.6084/m9.figshare.13278677

Additional file 10 of Perinatal environment shapes microbiota colonization and infant growth: impact on host response and intestinal function

Selma-Royo, M., Calatayud Arroyo, M., García‐Mantrana, I., Llorca, A. P., Escuriet, R., Martínez‐Costa, C., & Collado, M. C. (2020) · Figshare · doi:10.6084/m9.figshare.13278665

Additional file 8 of Parental care contributes to vertical transmission of microbes in a skin-feeding and direct-developing caecilian

Kouete, M. T., Bletz, M. C., LaBumbard, B. C., Woodhams, D. C., & Blackburn, D. C. (2024) · Figshare · doi:10.6084/m9.figshare.26589555

Additional file 2 of Parental care contributes to vertical transmission of microbes in a skin-feeding and direct-developing caecilian

Kouete, M. T., Bletz, M. C., LaBumbard, B. C., Woodhams, D. C., & Blackburn, D. C. (2024) · Figshare · doi:10.6084/m9.figshare.26589537

Additional file 7 of Perinatal environment shapes microbiota colonization and infant growth: impact on host response and intestinal function

Selma-Royo, M., Calatayud Arroyo, M., García‐Mantrana, I., Llorca, A. P., Escuriet, R., Martínez‐Costa, C., & Collado, M. C. (2020) · Figshare · doi:10.6084/m9.figshare.13278695

Additional file 9 of Perinatal environment shapes microbiota colonization and infant growth: impact on host response and intestinal function

Selma-Royo, M., Calatayud Arroyo, M., García‐Mantrana, I., Parra-Llorca, A., Escuriet, R., Martínez‐Costa, C., & Collado, M. C. (2020) · Figshare · doi:10.6084/m9.figshare.13278701

Additional file 11 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435872

Additional file 6 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435893

Additional file 1 of Hen raising helps chicks establish gut microbiota in their early life and improve microbiota stability after H9N2 challenge

Li, X., Bi, R., Xiao, K., Roy, A., Zhang, Z., Chen, X., Peng, J., Wang, R., Yang, R., Shen, X., et al. (2022) · Figshare · doi:10.6084/m9.figshare.19028955

Additional file 2 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435881

Additional file 1 of Meconium microbiota in naturally delivered canine puppies

Bertero, A., Banchi, P., Carro, A. D., Corrò, M., Colitti, B., Van Soom, A., Bertolotti, L., & Rota, A. (2024) · Figshare · doi:10.6084/m9.figshare.26549337

Additional file 4 of Hen raising helps chicks establish gut microbiota in their early life and improve microbiota stability after H9N2 challenge

Li, X., Bi, R., Xiao, K., Roy, A., Zhang, Z., Chen, X., Peng, J., Wang, R., Yang, R., Shen, X., et al. (2022) · Figshare · doi:10.6084/m9.figshare.19028967

Additional file 8 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435899

Additional file 4 of Perinatal environment shapes microbiota colonization and infant growth: impact on host response and intestinal function

Selma-Royo, M., Calatayud Arroyo, M., García‐Mantrana, I., Parra-Llorca, A., Escuriet, R., Martínez‐Costa, C., & Collado, M. C. (2020) · Figshare · doi:10.6084/m9.figshare.13278686

Additional file 3 of Parental care contributes to vertical transmission of microbes in a skin-feeding and direct-developing caecilian

Kouete, M. T., Bletz, M. C., LaBumbard, B. C., Woodhams, D. C., & Blackburn, D. C. (2024) · Figshare · doi:10.6084/m9.figshare.26589540

Additional file 1 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435878

Additional file 3 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435884

Additional file 1 of Divergent maturational patterns of the infant bacterial and fungal gut microbiome in the first year of life are associated with inter-kingdom community dynamics and infant nutrition

Mercer, E. M., Ramay, H. R., Moossavi, S., Laforest‐Lapointe, I., Reyna, M. E., Becker, A. B., Simons, E., Mandhane, P. J., Turvey, S. E., Moraes, T. J., et al. (2024) · Figshare · doi:10.6084/m9.figshare.25183204

Additional file 3 of Perinatal environment shapes microbiota colonization and infant growth: impact on host response and intestinal function

Selma-Royo, M., Calatayud Arroyo, M., García‐Mantrana, I., Parra-Llorca, A., Escuriet, R., Martínez‐Costa, C., & Collado, M. C. (2020) · Figshare · doi:10.6084/m9.figshare.13278683

Additional file 7 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435896

Additional file 8 of Perinatal environment shapes microbiota colonization and infant growth: impact on host response and intestinal function

Selma-Royo, M., Calatayud Arroyo, M., García‐Mantrana, I., Llorca, A. P., Escuriet, R., Martínez‐Costa, C., & Collado, M. C. (2020) · Figshare · doi:10.6084/m9.figshare.13278698

Additional file 4 of Parental care contributes to vertical transmission of microbes in a skin-feeding and direct-developing caecilian

Kouete, M. T., Bletz, M. C., LaBumbard, B. C., Woodhams, D. C., & Blackburn, D. C. (2024) · Figshare · doi:10.6084/m9.figshare.26589543

Additional file 10 of The Pregnancy and EARly Life study (PEARL) - a longitudinal study to understand how gut microbes contribute to maintaining health during pregnancy and early life

Phillips, S., Watt, R., Atkinson, T., Savva, G. M., Hayhoe, A., & Hall, L. J. (2021) · Figshare · doi:10.6084/m9.figshare.16435869

Additional file 5 of Hen raising helps chicks establish gut microbiota in their early life and improve microbiota stability after H9N2 challenge

Li, X., Bi, R., Xiao, K., Roy, A., Zhang, Z., Chen, X., Peng, J., Wang, R., Yang, R., Shen, X., et al. (2022) · Figshare · doi:10.6084/m9.figshare.19028970

Additional file 6 of Perinatal environment shapes microbiota colonization and infant growth: impact on host response and intestinal function

Selma-Royo, M., Calatayud Arroyo, M., García‐Mantrana, I., Llorca, A. P., Escuriet, R., Martínez‐Costa, C., & Collado, M. C. (2020) · Figshare · doi:10.6084/m9.figshare.13278692

Additional file 2 of Hen raising helps chicks establish gut microbiota in their early life and improve microbiota stability after H9N2 challenge

Li, X., Bi, R., Xiao, K., Roy, A., Zhang, Z., Chen, X., Peng, J., Wang, R., Yang, R., Shen, X., et al. (2022) · Figshare · doi:10.6084/m9.figshare.19028958

Priority effects in microbiome assembly

Debray, R., Herbert, R. A., Jaffe, A. L., Crits‐Christoph, A., Power, M. E., & Koskella, B. (2021) · Nature Reviews Microbiology · doi:10.1038/s41579-021-00604-w · Cited by 620

Human milk oligosaccharides modify the strength of priority effects in the Bifidobacterium community assembly during infancy

Laursen, M. F., & Roager, H. M. (2023) · The ISME Journal · doi:10.1038/s41396-023-01525-7 · Cited by 63

Priority effects shape the structure of infant-type Bifidobacterium communities on human milk oligosaccharides

Ojima, M. N., Jiang, L., Arzamasov, A. A., Yoshida, K., Odamaki, T., Xiao, J., Nakajima, A., Kitaoka, M., Hirose, J., Urashima, T., et al. (2022) · The ISME Journal · doi:10.1038/s41396-022-01270-3 · Cited by 118

Strain‐dependent and host genotype–dependent priority effects in gut microbiome assembly affect host fitness in Daphnia

Gurung, A., Mukherjee, S., Declercq, M., Souffreau, C., & Meester, L. D. (2024) · Limnology and Oceanography · doi:10.1002/lno.12614 · Cited by 11

Primary succession of Bifidobacteria drives pathogen resistance in neonatal microbiota assembly

Shao, Y., García-Mauriño, C., Clare, S., Dawson, N. J. R., Mu, A., Adoum, A., Harcourt, K., Liu, J., Browne, H. P., Stares, M., et al. (2024) · Nature Microbiology · doi:10.1038/s41564-024-01804-9 · Cited by 79