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Treating ICB-resistant cancer by inhibiting PD-L1 via DHHC3 degradation induced by cell penetrating peptide-induced chimera conjugates

Shi, Yu-Ying, Fan, Gang, Tan, Ruirong, Li, Shan, Sun, Hua-Bing, Li, Rui, Yang, Mengni, Gao, Shanshan, Liu, Miao, Dai, Meng-Yuan·2024·Cell Death & Disease

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Abstract

The current selection of ligands for both proteins of interest (POI) and E3 ubiquitin ligase significantly restricts the scope of targeted protein degradation (TPD) technologies. This study introduces cell-penetrating peptide-induced chimera conjugates (cp-PCCs) targeting the DHHC3 enzyme involved in PD-L1 palmitoylation. This approach disrupts PD-L1’s immunosuppressive function, enhancing anti-tumor immunity. We developed cp-PCCs to degrade DHHC3, directly linking DHHC3-mediated PD-L1 palmitoylation to PD-L1 stability on tumor cells. Our research utilized both in vitro assays and in vivo experiments in immune checkpoint blockade-resistant mouse models. We focused on a CRBN-based cp-PCC named PCC16, which demonstrated a DC50 of 102 nmol for DHHC3 degradation and significantly reduced PD-L1 levels. In resistant models, PCC16 not only robustly downregulated PD-L1 but also exhibited substantial anti-tumor activity in vivo without significant toxicity. This outperformed traditional inhibitors, showcasing the potential of cp-PCC technology to bypass current PROTAC limitations. Our findings suggest that cp-PCCs offer a promising method for targeting PD-L1 through DHHC3 inhibition and support their continued exploration as a versatile tool in cancer immunotherapy, especially for tumors resistant to standard treatments.

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  1. Zhang YD, Cui QL, Xu MM, Liu D, Yao SZ, Chen M. Current Advances in PD-1/PD-L1 Blockade in Recurrent Epithelial Ovarian Cancer. Front Immunol. 2022;13:901772. · DOI
  2. Sun Q, Hong Z, Zhang C, Wang L, Han Z, Ma D. Immune checkpoint therapy for solid tumours: clinical dilemmas and future trends. Signal Transduct Target Ther. 2023;8:320. · DOI · Paper page
  3. Cha JH, Chan LC, Li CW, Hsu JL, Hung MC. Mechanisms Controlling PD-L1 Expression in Cancer. Mol Cell. 2019;76:359–70. · DOI
  4. Liu J, Chen Z, Li Y, Zhao W, Wu J, Zhang Z. PD-1/PD-L1 Checkpoint Inhibitors in Tumor Immunotherapy. Front Pharm. 2021;12:731798. · DOI
  5. Fritz JM, Lenardo MJ. Development of immune checkpoint therapy for cancer. J Exp Med. 2019;216:1244–54. · DOI
  6. Kim MJ, Kim K, Park HJ, Kim GR, Hong KH, Oh JH, et al. Deletion of PD-1 destabilizes the lineage identity and metabolic fitness of tumor-infiltrating regulatory T cells. Nat Immunol. 2023;24:148–61. · DOI · Paper page
  7. Pu Y, Ji Q. Tumor-Associated Macrophages Regulate PD-1/PD-L1 Immunosuppression. Front Immunol. 2022;13:874589. · DOI
  8. Sun JY, Zhang D, Wu S, Xu M, Zhou X, Lu XJ, et al. Resistance to PD-1/PD-L1 blockade cancer immunotherapy: mechanisms, predictive factors, and future perspectives. Biomark Res. 2020;8:35. · DOI
  9. Jiang X, Wang J, Deng X, Xiong F, Ge J, Xiang B, et al. Role of the tumor microenvironment in PD-L1/PD-1-mediated tumor immune escape. Mol Cancer. 2019;18:10. · DOI
  10. Betof Warner A, Palmer JS, Shoushtari AN, Goldman DA, Panageas KS, Hayes SA, et al. Long-Term Outcomes and Responses to Retreatment in Patients With Melanoma Treated With PD-1 Blockade. J Clin Oncol. 2020;38:1655–63. · DOI
  11. Cohen EEW, Soulieres D, Le Tourneau C, Dinis J, Licitra L, Ahn MJ, et al. Pembrolizumab versus methotrexate, docetaxel, or cetuximab for recurrent or metastatic head-and-neck squamous cell carcinoma (KEYNOTE-040): a randomised, open-label, phase 3 study. Lancet. 2019;393:156–67. · DOI
  12. Saglam O, Conejo-Garcia J. PD-1/PD-L1 immune checkpoint inhibitors in advanced cervical cancer. Integr Cancer Sci Ther. 2018;5. https://doi.org/10.15761/ICST.1000272. · DOI
  13. O’Sullivan H, Collins D, O’Reilly S. Atezolizumab and Nab-Paclitaxel in Advanced Triple-Negative Breast Cancer. N Engl J Med. 2019;380:986.
  14. Kong X, Lu P, Liu C, Guo Y, Yang Y, Peng Y, et al. A combination of PD‑1/PD‑L1 inhibitors: The prospect of overcoming the weakness of tumor immunotherapy (Review). Mol Med Rep. 2021;23:362. · DOI
  15. Yang N, Kong B, Zhu ZH, Huang F, Zhang LL, Lu T, et al. Recent advances in targeted protein degraders as potential therapeutic agents. Mol Divers. 2024:28:309–33. · DOI
  16. Li X, Song YC. Proteolysis-targeting chimera (PROTAC) for targeted protein degradation and cancer therapy. J Hematol Oncol. 2020;13:50. · DOI
  17. Zhao HY, Xin M, Zhang SQ. Progress of small molecules for targeted protein degradation: PROTACs and other technologies. Drug Dev Res. 2023;84:337–94. · DOI
  18. Liu Z, Hu M, Yang Y, Du C, Zhou H, Liu C, et al. An overview of PROTACs: a promising drug discovery paradigm. Mol Biomed. 2022;3:46. · DOI
  19. He Y, Khan S, Huo Z, Lv D, Zhang X, Liu X, et al. Proteolysis targeting chimeras (PROTACs) are emerging therapeutics for hematologic malignancies. J Hematol Oncol. 2020;13:103. · DOI · Paper page
  20. Ishida T, Ciulli A. E3 Ligase Ligands for PROTACs: How They Were Found and How to Discover New Ones. Slas Discov. 2021;26:484–502. · DOI
  21. Dale B, Cheng M, Park KS, Kaniskan HÜ, Xiong Y, Jin J. Advancing targeted protein degradation for cancer therapy. Nat Rev Cancer. 2021;21:638–54. · DOI
  22. Shen FF, Dassama LMK. Opportunities and challenges of protein-based targeted protein degradation. Chem Sci. 2023;14:8433–47. · DOI
  23. Scognamiglio PL, Di Natale C, Perretta G, Marasco D. From Peptides to Small Molecules: An Intriguing but Intricated Way to New Drugs. Curr Med Chem. 2013;20:3803–17. · DOI
  24. Sakamoto KM, Kim KB, Kumagai A, Mercurio F, Crews CM, Deshaies RJ. Protacs: Chimeric molecules that target proteins to the Skp1-Cullin-F box complex for ubiquitination and degradation. Proc Natl Acad Sci USA. 2001;98:8554–9. · DOI · Paper page
  25. Bricelj A, Steinebach C, Kuchta R, Gutschow M, Sosic I. E3 Ligase Ligands in Successful PROTACs: An Overview of Syntheses and Linker Attachment Points. Front Chem. 2021;9:707317. · DOI
  26. Jiang HR, Xiong H, Gu SX, Wang ML. E3 ligase ligand optimization of Clinical PROTACs. Front Chem. 2023;11:1098331. · DOI
  27. Shi YY, Dong DR, Fan G, Dai MY, Liu M. A cyclic peptide-based PROTAC induces intracellular degradation of palmitoyltransferase and potently decreases PD-L1 expression in human cervical cancer cells. Front Immunol. 2023;14:1237964. · DOI
  28. Shi YY, Wang AJ, Liu XL, Dai MY, Cai HB. Stapled peptide PROTAC induced significantly greater anti-PD-L1 effects than inhibitor in human cervical cancer cells. Front Immunol. 2023;14:1193222. · DOI
  29. Qu J, Ren XX, Xue FQ, He Y, Zhang RH, Zheng Y, et al. Specific Knockdown of α-Synuclein by Peptide-Directed Proteasome Degradation Rescued Its Associated Neurotoxicity. Cell Chem Biol. 2020;27:751. · DOI
  30. Chu TT, Gao N, Li QQ, Chen PG, Yang XF, Chen YX, et al. Specific Knockdown of Endogenous Tau Protein by Peptide-Directed Ubiquitin-Proteasome Degradation. Cell Chem Biol. 2016;23:453–61. · DOI · Paper page
  31. Hameed DS, Sapmaz A, Gjonaj L, Merkx R, Ovaa H. Enhanced Delivery of Synthetic Labelled Ubiquitin into Live Cells by Using Next-Generation Ub-TAT Conjugates. Chembiochem. 2018;19:2553–7. · DOI
  32. Frankel AD, Pabo CO. Cellular uptake of the tat protein from human immunodeficiency virus. Cell. 1988;55:1189–93. · DOI
  33. Kardani K, Milani A, Bolhassani SHS. A. Cell penetrating peptides: the potent multi-cargo intracellular carriers. Expert Opin Drug Deliv. 2019;16:1227–58. · DOI
  34. Ziegler A, Nervi P, Dürrenberger M, Seelig J. The cationic cell-penetrating peptide Cpp derived from the HIV-1 protein TAT is rapidly transported into living fibroblasts:: Optical, biophysical, and metabolic evidence. Biochemistry. 2005;44:138–48. · DOI
  35. Lin J, Jin J, Shen Y, Zhang L, Gong G, Bian H, et al. Emerging protein degradation strategies: expanding the scope to extracellular and membrane proteins. Theranostics. 2021;11:8337–49. · DOI
  36. Sharma C, Hemler ME. Antioxidant and Anticancer Functions of Protein Acyltransferase DHHC3. Antioxidant. 2022;11:960. · DOI
  37. Yao H, Lan J, Li CS, Shi HB, Brosseau JP, Wang HB, et al. Inhibiting PD-L1 palmitoylation enhances T-cell immune responses against tumours. Nat Biomed Eng. 2019;3:306–17. · DOI
  38. Huang X, Wu F, Ye J, Wang L, Wang X, Li X, et al. Expanding the horizons of targeted protein degradation: A non-small molecule perspective. Acta Pharm Sin B. 2024;14:2402–27. · DOI
  39. Dai MY, Shi YY, Wang AJ, Liu XL, Liu M, Cai HB. High-potency PD-1/PD-L1 degradation induced by Peptide-PROTAC in human cancer cells. Cell Death Dis. 2022;13:924. · DOI
  40. Lu B, Ye J. Commentary: PROTACs make undruggable targets druggable: Challenge and opportunity. Acta Pharm Sin B. 2021;11:3335–6. · DOI
  41. Peng X, Hu Z, Zeng L, Zhang M, Xu C, Lu B, et al. Overview of epigenetic degraders based on PROTAC, molecular glue, and hydrophobic tagging technologies. Acta Pharmaceutica Sin B. 2024;14:533–78. · DOI
  42. Zhang G, Zhang J, Gao Y, Li Y, Li Y. Strategies for targeting undruggable targets. Expert Opin Drug Discov. 2022;17:55–69. · DOI
  43. Li YQ, Liu XL, Yu L, Huang X, Wang X, Han D, et al. Covalent LYTAC Enabled by DNA Aptamers for Immune Checkpoint Degradation Therapy. J Am Chem Soc. 2023;145:24506–21.
  44. Schmidt D, Scharf MM, Sydow D, Assmann E, Martí-Solano M, Keul M, et al. Analyzing Kinase Similarity in Small Molecule and Protein Structural Space to Explore the Limits of Multi-Target Screening. Molecules. 2021;26:629. · DOI
  45. Au YZ, Wang TJ, Sigua LH, Qi J. Peptide-Based PROTAC: The Predator of Pathological Proteins. Cell Chem Biol. 2020;27:637–9. · DOI · Paper page
  46. Li TW, Fu JX, Zeng ZX, Cohen D, Li J, Chen QM, et al. TIMER2.0 for analysis of tumor-infiltrating immune cells. Nucleic Acids Res. 2020;48:W509–14. · DOI

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Metadata

Authors
Shi, Y.-Y., Fan, G., Tan, R., Li, S., Sun, H.-B., Li, R., Yang, M., Gao, S., Liu, M., & Dai, M.-Y.
Venue
Cell Death & Disease
Published
2024-09-30
Volume
15
Issue
9
ISSN
2041-4889
Cited by
28
References
4
Language
en

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