Cited by 4Glycogen Storage Diseases and MyoclonusProtein Kinase Regulation and GTPase SignalingMetabolism, Diabetes, and Cancer

Architecture and activation of human muscle phosphorylase kinase

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Yang, Xiaoke, Zhu, Mingqi, Lu, Xue, Wang, Yuxin, Xiao, Junyu·2024·Nature Communications

Published version of a preprint

Abstract

The study of phosphorylase kinase (PhK)-regulated glycogen metabolism has contributed to the fundamental understanding of protein phosphorylation; however, the molecular mechanism of PhK remains poorly understood. Here we present the high-resolution cryo-electron microscopy structures of human muscle PhK. The 1.3-megadalton PhK α 4 β 4 γ 4 δ 4 hexadecamer consists of a tetramer of tetramer, wherein four αβγδ modules are connected by the central β 4 scaffold. The α- and β-subunits possess glucoamylase-like domains, but exhibit no detectable enzyme activities. The α-subunit serves as a bridge between the β-subunit and the γδ subcomplex, and facilitates the γ-subunit to adopt an autoinhibited state. Ca 2+ -free calmodulin (δ-subunit) binds to the γ-subunit in a compact conformation. Upon binding of Ca 2+ , a conformational change occurs, allowing for the de-inhibition of the γ-subunit through a spring-loaded mechanism. We also reveal an ADP-binding pocket in the β-subunit, which plays a role in allosterically enhancing PhK activity. These results provide molecular insights of this important kinase complex.

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Authors
Yang, X., Zhu, M., Lu, X., Wang, Y., & Xiao, J.
Affiliations
Peking University (CN)
Corresponding author
Xiao, Junyu
Venue
Nature Communications
Published
2024-03-28
Volume
15
Issue
1
Pages
2719-2719
ISSN
2041-1723 (ISSN-L)
OpenAlex
W4393277981
Cited by
4
References
2
Citations by year
2025: 4
FWCI
1.29
Type
journal article
Language
en
Open access
Locations
  • Nature Communications (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • RePEc: Research Papers in Economics (submittedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
Funders
National Natural Science Foundation of China (32325018)
Topics
  • Health Sciences › Medicine › Rheumatology › Glycogen Storage Diseases and Myoclonus
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Kinase Regulation and GTPase Signaling
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Metabolism, Diabetes, and Cancer
Keywords
phosphorylase kinase, glycogen metabolism, protein phosphorylation, cryo-EM structure, calmodulin, calcium binding, autoinhibition, allosteric regulation, muscle
MeSH terms
Humans, Muscles, Phosphorylase Kinase, Cryoelectron Microscopy, Protein Subunits

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