Cited by 14Receptor Mechanisms and SignalingNeuropeptides and Animal PhysiologyProtein Structure and Dynamics

Structure and dynamics of the pyroglutamylated RF-amide peptide QRFP receptor GPR103

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Iwama, Aika, Kise, Ryoji, Akasaka, Hiroaki, Sano, Fumiya K., Oshima, Hidetaka S., Inoue, Asuka, Shihoya, Wataru, Nureki, Osamu·2024·Nature Communications

Published version of a preprint

Abstract

Pyroglutamylated RF-amide peptide (QRFP) is a peptide hormone with a C-terminal RF-amide motif. QRFP selectively activates a class A G-protein-coupled receptor (GPCR) GPR103 to exert various physiological functions such as energy metabolism and appetite regulation. Here, we report the cryo-electron microscopy structure of the QRFP26-GPR103-G q complex at 3.19 Å resolution. QRFP26 adopts an extended structure bearing no secondary structure, with its N-terminal and C-terminal sides recognized by extracellular and transmembrane domains of GPR103 respectively. This movement, reminiscent of class B1 GPCRs except for orientation and structure of the ligand, is critical for the high-affinity binding and receptor specificity of QRFP26. Mutagenesis experiments validate the functional importance of the binding mode of QRFP26 by GPR103. Structural comparisons with closely related receptors, including RY-amide peptide-recognizing GPCRs, revealed conserved and diversified peptide recognition mechanisms, providing profound insights into the biological significance of RF-amide peptides. Collectively, this study not only advances our understanding of GPCR-ligand interactions, but also paves the way for the development of novel therapeutics targeting metabolic and appetite disorders and emergency medical care.

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Authors
Iwama, A., Kise, R., Akasaka, H., Sano, F. K., Oshima, H. S., Inoue, A., Shihoya, W., & Nureki, O.
Affiliations
  • The University of Tokyo (JP)
  • Tohoku University (JP)
Corresponding author
  • Inoue, Asuka
  • Shihoya, Wataru
  • Nureki, Osamu
Venue
Nature Communications
Published
2024-06-19
Volume
15
Issue
1
Pages
4769-4769
ISSN
2041-1723 (ISSN-L)
OpenAlex
W4399810062
Cited by
14
References
5
Citations by year
2026: 6 · 2025: 7 · 2024: 1
FWCI
1.91
Type
journal article
Language
en
Open access
Locations
  • Nature Communications (publishedVersion, cc-by)
  • Research Square (acceptedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • RePEc: Research Papers in Economics (submittedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
Funders
  • MEXT | Japan Society for the Promotion of Science (JP21H05037)
  • Japan Agency for Medical Research and Development (JP233fa627001, 22ck0106533h0003, JP22ama121002)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Receptor Mechanisms and Signaling
  • Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuropeptides and Animal Physiology
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
Keywords
QRFP, GPR103, G protein-coupled receptors, receptor specificity, appetite regulation, energy metabolism
MeSH terms
Humans, Ligands, Protein Binding, Cryoelectron Microscopy, Intercellular Signaling Peptides and Proteins, Receptors, G-Protein-Coupled, HEK293 Cells

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