Student or educator? Sign up with your school email and get 6 months of Pro free.
Cited by 230

The DOI matches its Crossref record; 6 of the 6 references it cites were found in a registry or an index.

A universal strategy for the creation of machine learning-based atomistic force fields

Open access
Huan, Tran Doan, Batra, Rohit, Chapman, James, Krishnan, Sridevi, Chen, Lihua, Ramprasad, Rampi·2017·npj Computational Materials

Abstract

Emerging machine learning (ML)-based approaches provide powerful and novel tools to study a variety of physical and chemical problems. In this contribution, we outline a universal strategy to create ML-based atomistic force fields, which can be used to perform high-fidelity molecular dynamics simulations. This scheme involves (1) preparing a big reference dataset of atomic environments and forces with sufficiently low noise, e.g., using density functional theory or higher-level methods, (2) utilizing a generalizable class of structural fingerprints for representing atomic environments, (3) optimally selecting diverse and non-redundant training datasets from the reference data, and (4) proposing various learning approaches to predict atomic forces directly (and rapidly) from atomic configurations. From the atomistic forces, accurate potential energies can then be obtained by appropriate integration along a reaction coordinate or along a molecular dynamics trajectory. Based on this strategy, we have created model ML force fields for six elemental bulk solids, including Al, Cu, Ti, W, Si, and C, and show that all of them can reach chemical accuracy. The proposed procedure is general and universal, in that it can potentially be used to generate ML force fields for any material using the same unified workflow with little human intervention. Moreover, the force fields can be systematically improved by adding new training data progressively to represent atomic environments not encountered previously.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1038/s41524-017-0042-y

Cites

6 of 6 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Show all 6 references

Research works printed but not linked: 44

  1. Jain, A., Shin, Y. & Persson, K. A. Computational predictions of energy materials using density functional theory. Nat. Rev. Mater 1, 15004 (2016). · DOI · Paper page
  2. Mannodi-Kanakkithodi, A. et al. Rational co-design of polymer dielectrics for energy storage. Adv. Mater. 28, 6277–6291 (2016). · DOI · Paper page
  3. Sharma, V. et al. Rational design of all organic polymer dielectrics. Nat. Commun. 5, 4845 (2014). · DOI · Paper page
  4. Mueller, T., Kusne, A. G. & Ramprasad, R. in Reviews in Computational Chemistry, (eds Parrill, A. L. & Lipkowitz, K. B.) Ch. 4 (Wiley, 2016).
  5. Botu, V. & Ramprasad, R. Learning scheme to predict atomic forces and accelerate materials simulations. Phys. Rev. B 92, 094306 (2015). · DOI · Paper page
  6. Botu, V. & Ramprasad, R. Adaptive machine learning framework to accelerate ab initio molecular dynamics. Int. J. Quant. Chem. 115, 1074–1083 (2015). · DOI · Paper page
  7. Botu, V., Batra, R., Chapman, J. & Ramprasad, R. Machine learning force fields: Construction, validation, and outlook. J. Phys. Chem. C 121, 511–522 (2017). · DOI · Paper page
  8. Botu, V., Chapman, J. & Ramprasad, R. A study of adatom ripening on an al (111) surface with machine learning force fields. Comput. Mater. Sci. 129, 332–335 (2016). · DOI
  9. Suzuki, T., Tamura, R. & Miyazaki, T. Machine learning for atomic forces in a crystalline solid: Transferability to various temperatures. Int. J. Quant. Chem. 117, 33–39 (2017). · DOI
  10. Feynman, R. P. Forces in molecules. Phys. Rev. 56, 340–343 (1939). · DOI · Paper page
  11. Blank, T. B., Brown, S. D., Calhoun, A. W. & Doren, D. J. Neural network models of potential energy surfaces. J. Chem. Phys. 103, 4129–4137 (1995). · DOI · Paper page
  12. Behler, J. Perspective: machine learning potentials for atomistic simulations. J. Chem. Phys. 145, 170901 (2016). · DOI · Paper page
  13. Deringer, V. L. & Csányi, G. Machine learning based interatomic potential for amorphous carbon. Phys. Rev. B 95, 094203 (2017). · DOI · Paper page
  14. Bartók, A. P. & Csányi, G. Gaussian approximation potentials: a brief tutorial introduction. Int. J. Quant. Chem. 115, 1051–1057 (2015). · DOI · Paper page
  15. Shapeev, A. Moment tensor potentials: a class of systematically improvable interatomic potentials. Multiscale Model. Simul. 14, 1153–1173 (2016). · DOI · Paper page
  16. Szlachta, W. J., Bartók, A. P. & Csányi, G. Accuracy and transferability of Gaussian approximation potential models for tungsten. Phys. Rev. B 90, 104108 (2014). · DOI · Paper page
  17. Thompson, A. P., Swiler, L. P., Trott, C. R., Foiles, S. M. & Tucker, G. K. Spectral neighbor analysis method for automated generation of quantum-accurate interatomic potentials. J. Comput. Phys. 285, 316–330 (2015). · DOI · Paper page
  18. Glielmo, A., Sollich, P. & De Vita, A. Accurate interatomic force fields via machine learning with covariant kernels. Phys. Rev. B 95, 214302 (2017). · DOI · Paper page
  19. Faraji, S. et al. High accuracy and transferability of a neural network potential through charge equilibration for calcium fluoride. Phys. Rev. B 95, 104105 (2017). · DOI
  20. Chmiela, S. et al. Machine learning of accurate energy-conserving molecular force fields. Sci. Adv. 3, e1603015 (2017). · DOI · Paper page
  21. Li, Z., Kermode, J. R. & De Vita, A. Molecular dynamics with on-the-fly machine learning of quantum-mechanical forces. Phys. Rev. Lett. 114, 096405 (2015). · DOI · Paper page
  22. Pilania, G., Wang, C., Jiang, X., Rajasekaran, S. & Ramprasad, R. Accelerating materials property predictions using machine learning. Sci. Rep. 3, 2810 (2013). · DOI · Paper page
  23. Huan, T. D., Mannodi-Kanakkithodi, A. & Ramprasad, R. Accelerated materials property predictions and design using motif-based fingerprints. Phys. Rev. B 92, 014106 (2015). · DOI · Paper page
  24. Mannodi-Kanakkithodi, A., Pilania, G., Huan, T. D., Lookman, T. & Ramprasad, R. Machine learning strategy for the accelerated design of polymer dielectrics. Sci. Rep. 6, 20952 (2016). · DOI · Paper page
  25. Kim, C., Pilania, G. & Ramprasad, R. From organized high-throughput data to phenomenological theory using machine learning: the example of dielectric breakdown. Chem. Mater. 28, 1304–1311 (2016). · DOI · Paper page
  26. Kim, C., Pilania, G. & Ramprasad, R. Machine learning assisted predictions of intrinsic dielectric breakdown strength of abx3 perovskites. J. Phys. Chem. C 120, 14575–14580 (2016). · DOI · Paper page
  27. Huan, T. D. et al. A polymer dataset for accelerated property prediction and design. Sci. Data 3, 160012 (2016). · DOI · Paper page
  28. Kim, C., Huan, T. D., Krishnan, S. & Ramprasad, R. A hybrid organic-inorganic perovskite dataset. Sci. Data 4, 170057 (2017). · DOI · Paper page
  29. Wang, J., Neskovic, P. & Cooper, L. N. in Advances in Natural Computation: First International Conference, ICNC 2005, Changsha, China, August 27–29, 2005, Proceedings, Part I, (eds Wang, L., Chen, K. & Ong, Y. S.) 554–564 (Springer, 2005). · DOI
  30. Lessmann, S., Stahlbock, R. & Crone, S. F. Genetic algorithms for support vector machine model selection. The 2006 IEEE International Joint Conference on Neural Network Proceedings, 3063–3069 (2006). · DOI
  31. Hastie, T., Tibshirani, R. & Friedman, J. The Elements of Statistical Learning: Data Mining, Inference, and Prediction 2nd edn (Springer, 2009). · DOI · Paper page
  32. Hofmann, T., Schölkopf, B. & Smola, A. J. Kernel methods in machine learning. Ann. Stat. 36, 1171–1220 (2008). · DOI · Paper page
  33. Rupp, M., Ramakrishnan, R. & von Lilienfeld, O. A. Machine learning for quantum mechanical properties of atoms in molecules. J. Phys. Chem. Lett. 6, 3309–3313 (2015). · DOI · Paper page
  34. Hohenberg, P. & Kohn, W. Inhomogeneous electron gas. Phys. Rev. 136, B864–B871 (1964). · DOI · Paper page
  35. Kohn, W. & Sham, L. Self-consistent equations including exchange and correlation effects. Phys. Rev. 140, A1133–A1138 (1965). · DOI · Paper page
  36. Blöchl, P. E. Projector augmented-wave method. Phys. Rev. B 50, 17953–17979 (1994). · DOI · Paper page
  37. Kresse, G. & Hafner, J. Ab initio molecular dynamics for liquid metals. Phys. Rev. B 47, 558–561 (1993). · DOI · Paper page
  38. Kresse, G. Ab initio molekular dynamik für flüssige metalle. Ph.D. thesis, (Technische Universität Wien, 1993).
  39. Kresse, G. & Furthmüller, J. Efficiency of ab-initio total energy calculations for metals and semiconductors using a plane-wave basis set. Comput. Mater. Sci. 6, 15–50 (1996). · DOI · Paper page
  40. Kresse, G. & Furthmüller, J. Efficient iterative schemes for ab initio total-energy calculations using a plane-wave basis set. Phys. Rev. B 54, 11169–11186 (1996). · DOI · Paper page
  41. Kresse, G. & Joubert, D. From ultrasoft pseudopotentials to the projector augmented-wave method. Phys. Rev. B 59, 1758–1775 (1999). · DOI · Paper page
  42. Perdew, J. P., Burke, K. & Ernzerhof, M. Generalized gradient approximation made simple. Phys. Rev. Lett. 77, 3865–3868 (1996). · DOI · Paper page
  43. Sjostrom, T., Crockett, S. & Rudin, S. Multiphase aluminum equations of state via density functional theory. Phys. Rev. B 94, 144101 (2016). · doi:10.1103/physrevb.94.144101
  44. Karin, T., Dunham, S. & Fu, K.-M. Alignment of the diamond nitrogen vacancy center by strain engineering. Appl. Phys. Lett. 105, 053106 (2014). · DOI

Cited by

See all 230

Metadata

Authors
Huan, T. D., Batra, R., Chapman, J., Krishnan, S., Chen, L., & Ramprasad, R.
Venue
npj Computational Materials
Published
2017-09-18
Volume
3
Issue
1
ISSN
2057-3960 (ISSN-L)
OpenAlex
W2755837508
Cited by
230
References
6
FWCI
15.13
Type
journal article
Language
en
Open access
gold
Licence

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

How to cite

Cite CoChat for the checks on this page, and the paper for its own findings.

This page
CoChat. (2026). Citation check: A universal strategy for the creation of machine learning-based atomistic force fields. https://app.cochat.ai/papers/10.1038/s41524-017-0042-y
The paper
Huan, T. D., Batra, R., Chapman, J., Krishnan, S., Chen, L., & Ramprasad, R. (2017). A universal strategy for the creation of machine learning-based atomistic force fields. npj Computational Materials. https://doi.org/10.1038/s41524-017-0042-y

Data sources

Bibliographic data: Semantic Scholar, OpenAlex, Crossref.

Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.