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Explosive diversification of marine fishes at the Cretaceous–Palaeogene boundary
Abstract
The Cretaceous-Palaeogene (K-Pg) mass extinction is linked to the rapid emergence of ecologically divergent higher taxa (for example, families and orders) across terrestrial vertebrates, but its impact on the diversification of marine vertebrates is less clear. Spiny-rayed fishes (Acanthomorpha) provide an ideal system for exploring the effects of the K-Pg on fish diversification, yet despite decades of morphological and molecular phylogenetic efforts, resolution of both early diverging lineages and enormously diverse subclades remains problematic. Recent multilocus studies have provided the first resolved phylogenetic backbone for acanthomorphs and suggested novel relationships among major lineages. However, these new relationships and associated timescales have not been interrogated using phylogenomic approaches. Here, we use targeted enrichment of >1,000 ultraconserved elements in conjunction with a divergence time analysis to resolve relationships among 120 major acanthomorph lineages and provide a new timescale for acanthomorph radiation. Our results include a well-supported topology that strongly resolves relationships along the acanthomorph backbone and the recovery of several new relationships within six major percomorph subclades. Divergence time analyses also reveal that crown ages for five of these subclades, and for the bulk of the species diversity in the sixth, coincide with the K-Pg boundary, with divergences between anatomically and ecologically distinctive su…
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The study's results challenge previous hypotheses suggesting a continuous increase in diversification rates following the K-Pg extinction.
“Additionally, our results challenge previous hypotheses suggesting a continuous increase in diversification rates following the K-Pg extinction.58,59,60,61”
From A genomic compendium of hundreds of teleost fishes reveals their evolutionary landscape (2026) · cites this paper as [58]
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Prum, R. O., Berv, J. S., Dornburg, A., Field, D. J., Townsend, J. P., Lemmon, E. M., & Lemmon, A. R. (2016) · Nature · doi:10.1038/nature19417 · Cited by 928 · cited 1×
“24 presents a topology with multiple points of disagreement among these lineages including: (1) the relative position of gobiarians and syngnatharians + pelagiarians; (2) the relationship between labrids and other percomorph lineages; (3) the sister group of the centrarchiforms; and (4) the position of Serranoidei and…”
BackgroundSelecting optimal partitioning schemes for phylogenomic datasets
Lanfear, R., Calcott, B., Kainer, D., Mayer, C., & Stamatakis, A. (2014) · BMC Evolutionary Biology · doi:10.1186/1471-2148-14-82 · Cited by 762
Diversification and Extinction in the History of Life
Benton, M. J. (1995) · Science · doi:10.1126/science.7701342 · Cited by 654
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Sorted by citations
Davesne, D., Meunier, F. J., Schmitt, A. D., Friedman, M., Otero, O., & Benson, R. B. J. (2019) · Biological Reviews · doi:10.1111/brv.12505 · Cited by 57
Self-citationA genomic compendium of hundreds of teleost fishes reveals their evolutionary landscape
Song, Y., Yuan, Z., Fang, C., Zhang, S., Yang, L., Hu, M., Seim, I., Liu, S., Tian, X., Wang, C., et al. (2026) · The Innovation · doi:10.1016/j.xinn.2025.101177 · Cited by 3
Metadata
- Authors
- Alfaro, M. E., Faircloth, B. C., Harrington, R. C., Sorenson, L., Friedman, M., Thacker, C. E., Oliveros, C. H., Černý, D., & Near, T. J.
- ORCID
- Venue
- Nature Ecology & Evolution
- Published
- 2018-03-12
- Volume
- 2
- Issue
- 4
- Pages
- 688-696
- ISSN
- 2397-334X
- Cited by
- 206
- References
- 4
- Language
- en
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