Cited by 148Diabetes and associated disordersDiabetes Management and ResearchGenetic Associations and Epidemiology

A combined risk score enhances prediction of type 1 diabetes among susceptible children

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Ferrat, Lauric A., Vehik, Kendra, Sharp, Seth A., Lernmark, Åke, Rewers, Marian J., She, Jin-Xiong, Ziegler, Anette-G., Toppari, Jorma +406 more·2020·Nature Medicine

Abstract

Type 1 diabetes (T1D)-an autoimmune disease that destroys the pancreatic islets, resulting in insulin deficiency-often begins early in life when islet autoantibody appearance signals high risk 1. However, clinical diabetes can follow in weeks or only after decades, and is very difficult to predict. Ketoacidosis at onset remains common 2,3 and is most severe in the very young 4,5, in whom it can be life threatening and difficult to treat 6-9. Autoantibody surveillance programs effectively prevent most ketoacidosis 10-12 but require frequent evaluations whose expense limits public health adoption 13. Prevention therapies applied before onset, when greater islet mass remains, have rarely been feasible 14 because individuals at greatest risk of impending T1D are difficult to identify. To remedy this, we sought accurate, cost-effective estimation of future T1D risk by developing a combined risk score incorporating both fixed and variable factors (genetic, clinical and immunological) in 7,798 high-risk children followed closely from birth for 9.3 years. Compared with autoantibodies alone, the combined model dramatically improves T1D prediction at ≥2 years of age over horizons up to 8 years of age (area under the receiver operating characteristic curve ≥ 0.9), doubles the estimated efficiency of population-based newborn screening to prevent ketoacidosis, and enables individualized risk estimates for better prevention trial selection.

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  • These additional genetic factors may assist in assigning a probability of the diagnosis of type 1 diabetes of uncertain etiology, and genetic risk scores for type 1 diabetes have been developed.

    “These additional genetic factors may assist in assigning a probability of the diagnosis of type 1 diabetes of uncertain etiology, and genetic risk scores for type 1 diabetes have been developed (390).”

    From Guidelines and Recommendations for Laboratory Analysis in the Diagnosis and Management of Diabetes Mellitus (2023) · cites this paper as [390]

    The First Paragraph says genetic factors have been used in type 1 diabetes prediction and that combined risk factors improve the accuracy of diagnoses in adult incident cases. Extended Data Fig. 2 also describes several genetic risk scores. The paper does not show that these scores assign a probability of type 1 diabetes as the diagnosis when a patient's diabetes etiology is uncertain; its individual probability estimates concern future disease risk in children. (LLM, conf=0.83)

    Experimental — accuracy not yet measured
  • A genetic risk score may be used at birth to identify children with a particularly high genetic risk of development of islet autoimmunity or type 1 diabetes.

    “A genetic risk score may be used at birth to identify children with a particularly high genetic risk of development of islet autoimmunity or type 1 diabetes (388,390,392).”
  • Genetic risk stratification for type 1 diabetes has focused on assessment of HLA risk or more recently calculation of polygenic genetic risk scores that sum the effects of a large number of variants.

    “Genetic risk stratification has focused on assessment of HLA risk or more recently calculation of polygenic genetic risk scores that sum the effects of a large number of variants128.”

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References 59 · Cited by 148

Authors
Ferrat, L. A., Vehik, K., Sharp, S. A., Lernmark, Å., Rewers, M. J., She, J.-X., Ziegler, A.-G., Toppari, J., Akolkar, B., Krischer, J. P., Weedon, M. N., Oram, R. A., Hagopian, W. A., TEDDY Study Group, Colorado Clinical Center, Barbour, A., Bautista, K., Baxter, J., Felipe-Morales, D., Driscoll, K., Frohnert, B. I., Stahl, M., Gesualdo, P., Hoffman, M., Karban, R., Liu, E., Norris, J., Peacock, S., Shorrosh, H., Steck, A., Stern, M., Villegas, E., Waugh, K., Finland Clinical Center, Simell, O. G., Adamsson, A., Ahonen, S., Åkerlund, M., Hakola, L., Hekkala, A., Holappa, H., Hyöty, H., Ikonen, A., Ilonen, J., Jäminki, S., Jokipuu, S., Karlsson, L., Kero, J., Kähönen, M., Knip, M., Koivikko, M.-L., Koskinen, M., Koreasalo, M., Kurppa, K., Kytölä, J., Latva-aho, T., Lindfors, K., Lönnrot, M., Mäntymäki, E., Mattila, M., Miettinen, M., Multasuo, K., Mykkänen, T., Niininen, T., Niinistö, S., Nyblom, M., Oikarinen, S., Ollikainen, P., Othmani, Z., Pohjola, S., Rajala, P., Rautanen, J., Riikonen, A., Riski, E., Pekkola, M., Romo, M., Ruohonen, S., Simell, S., Sjöberg, M., Stenius, A., Tossavainen, P., Vähä-Mäkilä, M., Vainionpää, S., Varjonen, E., Veijola, R., Viinikangas, I., Virtanen, S. M., Georgia/Florida Clinical Center, Schatz, D., Hopkins, D., Steed, L., Bryant, J., Silvis, K., Haller, M., Gardiner, M., McIndoe, R., Sharma, A., Anderson, S. W., Jacobsen, L., Marks, J., Towe, P. D., Germany Clinical Center, Bonifacio, E., Gezginci, C., Heublein, A., Hohoff, E., Hummel, S., Knopff, A., Koch, C., Koletzko, S., Ramminger, C., Roth, R., Schmidt, J., Scholz, M., Stock, J., Warncke, K., Wendel, L., Winkler, C., Sweden Clinical Center, Agardh, D., Aronsson, C. A., Ask, M., Bennet, R., Cilio, C., Dahlberg, S., Engqvist, H., Ericson-Hallström, E., Fors, A. B., Fransson, L., Gard, T., Hansen, M., Jisser, H., Johansen, F., Jonsdottir, B., Elding Larsson, H., Lindström, M., Lundgren, M., Maziarz, M., Månsson-Martinez, M., Melin, J., Mestan, Z., Nilsson, C., Ottosson, K., Rahmati, K., Ramelius, A., Salami, F., Sjöberg, A., Sjöberg, B., Törn, C., Wimar, Å., Washington Clinical Center, Killian, M., Crouch, C. C., Skidmore, J., Chavoshi, M., Meyer, A., Meyer, J., Mulenga, D., Powell, N., Radtke, J., Romancik, M., Roy, S., Schmitt, D., Zink, S., Pennsylvania Satellite Center, Becker, D., Franciscus, M., Smith, M. D.-E., Daftary, A., Klein, M. B., Yates, C., Data Coordinating Center, Austin-Gonzalez, S., Avendano, M., Baethke, S., Burkhardt, B., Butterworth, M., Clasen, J., Cuthbertson, D., Eberhard, C., Fiske, S., Garmeson, J., Gowda, V., Heyman, K., Hsiao, B., Karges, C., Laras, F. P., Li, Q., Liu, S., Liu, X., Lynch, K., Maguire, C., Malloy, J., McCarthy, C., Parikh, H., Remedios, C., Shaffer, C., Smith, L., Smith, S., Sulman, N., Tamura, R., Tewey, D., Toth, M., Uusitalo, U., Vijayakandipan, P., Wood, K., Yang, J., Project scientist, Laboratories, A. R., Yu, L., Miao, D., Bingley, P., Williams, A., Chandler, K., Kelland, I., Khoud, Y. B., Zahid, H., Randell, M., Laboratory, H. R., Chavoshi, M., Radtke, J., Zink, S., Repository, Ke, S., Mulholland, N., Laboratory, S., Rich, S. S., Chen, W.-M., Onengut-Gumuscu, S., Farber, E., Pickin, R. R., Davis, J., Davis, J., Gallo, D., Bonnie, J., Campolieto, P., Laboratory, M. A. M., Petrosino, J. F., Ajami, N. J., Lloyd, R. E., Ross, M. C., O’Brien, J. L., Hutchinson, D. S., Smith, D. P., Wong, M. C., Tian, X., Ayvaz, T., Tamegnon, A., Truong, N., Moreno, H., Riley, L., Moreno, E., Bauch, T., Kusic, L., Metcalf, G., Muzny, D., Doddapaneni, H., Gibbs, R., contributors, O., Bourcier, K., Briese, T., Johnson, S. B., Triplett, E., Committees, Studies, A., Ziegler, A. G., Tamura, R., Diet, Norris, J., Virtanen, S. M., Frohnert, B. I., Gesualdo, P., Koreasalo, M., Miettinen, M., Niinistö, S., Riikonen, A., Silvis, K., Hohoff, E., Hummel, S., Winkler, C., Aronsson, C. A., Skidmore, J., Smith, M. D.-E., Butterworth, M., Li, Q., Liu, X., Tamura, R., Uusitalo, U., Yang, J., Genetics, Rich, S. S., Norris, J., Steck, A., Ilonen, J., Ziegler, A. G., Törn, C., Li, Q., Liu, X., Parikh, H., Erlich, H., Chen, W.-M., Onengut-Gumuscu, S., Subjects/Publicity/Publications, H., Schatz, D., Ziegler, A. G., Markers, I., Cilio, C., Bonifacio, E., Knip, M., Schatz, D., Burkhardt, B., Lynch, K., Yu, L., Bingley, P., Bourcier, K., Agents, I., Hyöty, H., Triplett, E., Lloyd, R., Gesualdo, P., Waugh, K., Lönnrot, M., Agardh, D., Cilio, C., Larsson, H. E., Killian, M., Burkhardt, B., Lynch, K., Briese, T., Implementation, L., Waugh, K., Schatz, D., Killian, M., Psychosocial, Johnson, S. B., Roth, R., Baxter, J., Driscoll, K., Schatz, D., Stock, J., Fiske, S., Liu, X., Lynch, K., Smith, L., Assurance, Q., Baxter, J., Steering, Lernmark, Å., Coordinators, S., Baxter, J., Killian, M., Bautista, K., Gesualdo, P., Hoffman, M., Karban, R., Norris, J., Waugh, K., Adamsson, A., Kähönen, M., Niininen, T., Stenius, A., Varjonen, E., Hopkins, D., Steed, L., Bryant, J., Gardiner, M., Marks, J., Ramminger, C., Stock, J., Winkler, C., Aronsson, C. A., Jonsdottir, B., Melin, J., Killian, M., Crouch, C. C., Mulenga, D., McCarthy, C., Smith, L., Smith, S., Tamura, R., Johnson, S. B., Disease, C., Agardh, D., Liu, E., Koletzko, S., Kurppa, K., Stahl, M., Hoffman, M., Kurppa, K., Lindfors, K., Simell, S., Steed, L., Aronsson, C. A., Killian, M., Tamura, R., Implementation, C., Haller, M., Larsson, H. E., Frohnert, B. I., Gesualdo, P., Hoffman, M., Steck, A., Kähönen, M., Veijola, R., Steed, L., Jacobsen, L., Marks, J., Stock, J., Warncke, K., Lundgren, M., Wimar, Å., Crouch, C. C., Liu, X., & Tamura, R.
Affiliations
  • University of Exeter (GB)
  • University of South Florida (US)
  • University of Colorado Anschutz (US)
  • Augusta University (US)
  • University of Turku (FI)
  • National Institutes of Health (US)
  • Tampere University (FI)
  • Oulu University Hospital (FI)
  • Lund University (SE)
  • University of Florida (US)
  • TUM Klinikum (DE)
  • Children's Hospital of Pittsburgh (US)
  • University of Bristol (GB)
  • University of Virginia (US)
  • National Institute of Diabetes and Digestive and Kidney Diseases (US)
  • Baylor College of Medicine (US)
  • Florida State University (US)
  • Finnish Institute for Health and Welfare (FI)
  • Tampere University Hospital (FI)
Corresponding author
Hagopian, William A.
Venue
Nature Medicine
Published
2020-08-01
Volume
26
Issue
8
Pages
1247-1255
ISSN
  • 1078-8956 (ISSN-L)
  • 1546-170X
OpenAlex
W3048014252
Cited by
148
References
59
Citations by year
2026: 14 · 2025: 33 · 2024: 23 · 2023: 30 · 2022: 23 · 2021: 23 · 2020: 2
FWCI
11.42
Type
journal article
Language
en
Open access
Locations
  • Nature Medicine (publishedVersion)
  • PubMed (publishedVersion)
  • Europe PMC (PubMed Central) (acceptedVersion)
  • PubMed Central (acceptedVersion)
  • Open Research Exeter (University of Exeter) (acceptedVersion)
  • Figshare (submittedVersion)
  • Työväentutkimus Vuosikirja (submittedVersion)
  • Lund University Publications (Lund University) (submittedVersion)
  • mediaTUM – the media and publications repository of the Technical University Munich (Technical University Munich) (submittedVersion)
  • Site cant be reached (submittedVersion)
  • PuSH - Publication Server of Helmholtz Zentrum München (submittedVersion)
  • Royal Devon and Exeter Research Repository (Royal Devon and Exeter) (submittedVersion)
Funders
  • JDRF (3-SRA-2019-827-S-B)
  • U.S. Department of Health & Human Services | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (DK063829, HHSN267200700014C)
  • please see corresponding author list of funders
  • Diabetes UK (17/0005757, 16/0005529)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Diabetes and associated disorders
  • Health Sciences › Medicine › Endocrinology, Diabetes and Metabolism › Diabetes Management and Research
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
Keywords
type 1 diabetes, diabetes risk prediction, risk score, islet autoantibodies, children, ketoacidosis, newborn screening, genetic risk, family history (medicine), autoimmune disease
MeSH terms
Autoantibodies, Child, Child, Preschool, Diabetes Mellitus, Type 1, Female, Humans, Infant, Infant, Newborn, Insulin, Islets of Langerhans, Ketosis, Male, Risk Factors, Autoimmunity, Neonatal Screening, Risk Assessment, Genetic Predisposition to Disease

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