Structural basis for Salmonella infection by two Microviridae phages

Highly accurate protein structure prediction with AlphaFold

Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764 · see citing works

Features and development of Coot

Emsley, P., Lohkamp, B., Scott, W. G., & Cowtan, K. D. (2010) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444910007493 · Cited by 27,510 · see citing works

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Bankevich, A., Nurk, S., Antipov, D., Gurevich, A. A., Dvorkin, M. V., Kulikov, A. S., Lesin, V. M., Nikolenko, S., Pham, S., Prjibelski, A. D., et al. (2012) · Journal of Computational Biology · doi:10.1089/cmb.2012.0021 · Cited by 25,691 · see citing works

<i>PHENIX</i> : a comprehensive Python-based system for macromolecular structure solution

Adams, P. D., Afonine, P. V., Bunkóczi, G., Chen, V. B., Davis, I. W., Echols, N., Headd, J. J., Hung, L.-W., Kapral, G. J., Grosse-Kunstleve, R. W., et al. (2010) · Acta Crystallographica Section D Biological Crystallography · doi:10.1107/s0907444909052925 · Cited by 23,716 · see citing works

The RAST Server: Rapid Annotations using Subsystems Technology

Aziz, R. K., Bartels, D., Best, A. A., DeJongh, M., Disz, T. L., Edwards, R. A., Formsma, K., Gerdes, S., Glass, E. M., Kubal, M., et al. (2008) · BMC Genomics · doi:10.1186/1471-2164-9-75 · Cited by 11,777 · see citing works

Inference of macromolecular assemblies from crystalline state.

Krissinel, E., & Henrick, K. (2007) · Journal of Molecular Biology · doi:10.1016/j.jmb.2007.05.022 · Cited by 10,189 · see citing works

cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination

Punjani, A., Rubinstein, J. L., Fleet, D. J., & Brubaker, M. A. (2017) · Nature Methods · doi:10.1038/nmeth.4169 · Cited by 9,168 · see citing works

MotionCor2 - anisotropic correction of beam-induced motion for improved cryo-electron microscopy

Zheng, S., Palovcak, E. J., Armache, J., Verba, K., Cheng, Y.-F., & Agard, D. (2017) · Nature Methods · doi:10.1038/nmeth.4193 · Cited by 7,678 · see citing works

Computer visualization of three-dimensional image data using IMOD.

Kremer, J. R., Mastronarde, D., & Mcintosh, J. (1996) · Journal of Structural Biology · doi:10.1006/jsbi.1996.0013 · Cited by 5,770 · see citing works

Automated electron microscope tomography using robust prediction of specimen movements.

Mastronarde, D. (2005) · Journal of Structural Biology · doi:10.1016/j.jsb.2005.07.007 · Cited by 5,446 · see citing works

RELION: Implementation of a Bayesian approach to cryo-EM structure determination

Scheres, S. H. W. (2012) · Journal of Structural Biology · doi:10.1016/j.jsb.2012.09.006 · Cited by 5,446 · see citing works

CTFFIND4: Fast and accurate defocus estimation from electron micrographs

Rohou, A. L., & Grigorieff, N. (2015) · Journal of Structural Biology · doi:10.1016/j.jsb.2015.08.008 · Cited by 4,926 · see citing works

UCSF ChimeraX : Tools for structure building and analysis

Meng, E. C., Goddard, T. D., Pettersen, E. F., Couch, G. S., Pearson, Z., Morris, J. H., & Ferrin, T. E. (2023) · Protein Science · doi:10.1002/pro.4792 · Cited by 4,575 · see citing works

Global burden of bacterial antimicrobial resistance 1990–2021: a systematic analysis with forecasts to 2050

Naghavi, M., Vollset, S. E., Ikuta, K. S., Swetschinski, L. R., Gray, A. P., Wool, E. E., Robles Aguilar, G., Mestrovic, T., Smith, G., Han, C., et al. (2024) · The Lancet · doi:10.1016/s0140-6736(24)01867-1 · Cited by 3,791 · see citing works

EMAN2: An extensible image processing suite for electron microscopy

Tang, G., Peng, L., Baldwin, P. R., Mann, D. S., Jiang, W., Rees, I., & Ludtke, S. J. (2006) · Journal of Structural Biology · doi:10.1016/j.jsb.2006.05.009 · Cited by 2,914 · see citing works

Antibiotics: past, present and future

Hutchings, M. I., Truman, A. W., & Wilkinson, B. M. (2019) · Current Opinion in Microbiology · doi:10.1016/j.mib.2019.10.008 · Cited by 2,391 · see citing works

tRNAscan-SE 2.0: improved detection and functional classification of transfer RNA genes

Chan, P. P., Lin, B. Y., Mak, A. J., & Lowe, T. M. (2021) · Nucleic Acids Research · doi:10.1093/nar/gkab688 · Cited by 1,959 · see citing works

World Health Organization Estimates of the Global and Regional Disease Burden of 22 Foodborne Bacterial, Protozoal, and Viral Diseases, 2010: A Data Synthesis.

Kirk, M. D., Pires, S. M., Black, R. E., Caipo, M., Crump, J. A., Devleesschauwer, B., Döpfer, D., Fazil, A., Fischer-Walker, C. L., Hald, T., et al. (2015) · PLoS Medicine · doi:10.1371/journal.pmed.1001921 · Cited by 1,625 · see citing works

Codon usage tabulated from international DNA sequence databases: status for the year 2000

Nakamura, Y. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.1.292 · Cited by 1,259 · see citing works

FQC Dashboard: integrates FastQC results into a web-based, interactive, and extensible FASTQ quality control tool

Brown, J., Pirrung, M., & McCue, L. A. (2017) · Bioinformatics · doi:10.1093/bioinformatics/btx373 · Cited by 1,105 · see citing works

Addressing Preferred Specimen Orientation in Single-Particle Cryo-EM through Tilting

Tan, Y.-Z., Baldwin, P. R., Davis, J., Williamson, J., Potter, C., Carragher, B., & Lyumkis, D. (2017) · Nature Methods · doi:10.1038/nmeth.4347 · Cited by 920 · see citing works

Salmonellae interplay with host cells

Haraga, A., Ohlson, M. B., & Miller, S. I. (2007) · Nature Reviews Microbiology · doi:10.1038/nrmicro1788 · Cited by 835 · see citing works

Structure and function of lipopolysaccharides

Erridge, C., Bennett‐Guerrero, E., & Poxton, I. R. (2002) · Microbes and Infection · doi:10.1016/s1286-4579(02)01604-0 · Cited by 682 · see citing works

Targeting mechanisms of tailed bacteriophages

Nóbrega, F. L., Vlot, M., de Jonge, P. A., Dreesens, L. L., Beaumont, H. J. E., Lavigne, R., Dutilh, B. E., & Brouns, S. J. J. (2018) · Nature Reviews Microbiology · doi:10.1038/s41579-018-0070-8 · Cited by 601 · see citing works

Engineering Phage Host-Range and Suppressing Bacterial Resistance through Phage Tail Fiber Mutagenesis

Yehl, K. M., Lemire, S., Yang, A. C., Ando, H., Mimee, M., Torres, M. D. T., de la Fuente‐Núñez, C., & Lu, T. K. (2019) · Cell · doi:10.1016/j.cell.2019.09.015 · Cited by 443 · see citing works

The European Union summary report on antimicrobial resistance in zoonotic and indicator bacteria from humans, animals and food in 2016

(EFSA), E. F. S. A. (2018) · EFSA Journal · doi:10.2903/j.efsa.2018.5182 · Cited by 388 · see citing works

Bacteriophage for Biocontrol of Foodborne Pathogens: Calculations and Considerations

Hagens, S., & Loessner, M. J. (2010) · Current Pharmaceutical Biotechnology · doi:10.2174/138920110790725429 · Cited by 366 · see citing works

Isotropic reconstruction for electron tomography with deep learning

Liu, Y.-T., Zhang, H., Wang, H., Tao, C.-L., Bi, G., & Zhou, Z. H. (2022) · Nature Communications · doi:10.1038/s41467-022-33957-8 · Cited by 355 · see citing works

Protein N-terminal methionine excision

Giglione, C., Boularot, A., & Meinnel, T. (2004) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-004-3466-8 · Cited by 335 · see citing works

Applying the ResFinder and VirulenceFinder web-services for easy identification of acquired antibiotic resistance andE. colivirulence genes in bacteriophage and prophage nucleotide sequences

Kleinheinz, K., Joensen, K., & Larsen, M. V. (2014) · Bacteriophage · doi:10.4161/bact.27943 · Cited by 323 · see citing works

An introduction to sample preparation and imaging by cryo-electron microscopy for structural biology

Thompson, R. F., Walker, M. L., Siebert, C. A., Muench, S. P., & Ranson, N. A. (2016) · Methods · doi:10.1016/j.ymeth.2016.02.017 · Cited by 284 · see citing works

Parallel cryo electron tomography on in situ lamellae

Eisenstein, F., Yanagisawa, H., Kashihara, H., Kikkawa, M., Tsukita, S., & Danev, R. (2022) · Nature Methods · doi:10.1038/s41592-022-01690-1 · Cited by 262 · see citing works

Atomic structure of single-stranded DNA bacteriophage ΦX174 and its functional implications

McKENNA, R. V., Xia, D., Willingmann, P., IIag, L. L., Krishnaswamy, S., Rossmann, M. G., Olson, N. H., Baker, T. S., & Incardona, N. L. (1992) · Nature · doi:10.1038/355137a0 · Cited by 260 · see citing works

The Bacteriophage T7 Virion Undergoes Extensive Structural Remodeling During Infection

Hu, B., Margolin, W., Molineux, I. J., & Liu, J. (2013) · Science · doi:10.1126/science.1231887 · Cited by 255 · see citing works

First Things First: Vital Protein Marks by N-Terminal Acetyltransferases

Aksnes, H., Drazic, A., Marie, M., & Arnesen, T. (2016) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2016.07.005 · Cited by 253 · see citing works

Salmonella infection – prevention and treatment by antibiotics and probiotic yeasts: a review

Gut, A. M., Vasiljevic, T., Yeager, T. R., & Donkor, O. N. (2018) · Microbiology · doi:10.1099/mic.0.000709 · Cited by 210 · see citing works

Salmonella Infections in Childhood

Bula-Rudas, F. J., Rathore, M. H., & Maraqa, N. F. (2015) · Advances in Pediatrics · doi:10.1016/j.yapd.2015.04.005 · Cited by 175 · see citing works

Protein Acetylation in Bacteria

VanDrisse, C. M., & Escalante‐Semerena, J. C. (2019) · Annual Review of Microbiology · doi:10.1146/annurev-micro-020518-115526 · Cited by 151 · see citing works

The Bimodal Lifestyle of Intracellular Salmonella in Epithelial Cells: Replication in the Cytosol Obscures Defects in Vacuolar Replication

Malik-Kale, P., Winfree, S., & Steele‐Mortimer, O. (2012) · PLoS ONE · doi:10.1371/journal.pone.0038732 · Cited by 139 · see citing works

Profiles of Adaptation in Two Similar Viruses

Holder, K. K., & Bull, J. J. (2001) · Genetics · doi:10.1093/genetics/159.4.1393 · Cited by 126 · see citing works

Horizontal Gene Transfer and the Evolution of Microvirid Coliphage Genomes

Rokyta, D. R., Burch, C. L., Caudle, S. B., & Wichman, H. A. (2006) · Journal of Bacteriology · doi:10.1128/jb.188.3.1134-1142.2006 · Cited by 126 · see citing works

Icosahedral bacteriophage ΦX174 forms a tail for DNA transport during infection

Sun, L., Young, L. N., Zhang, X., Boudko, S. P., Fokine, A., Zbornik, E. A., Roznowski, A. P., Molineux, I. J., Rossmann, M. G., & Fane, B. A. (2013) · Nature · doi:10.1038/nature12816 · Cited by 116 · see citing works

Estimating Community Incidence ofSalmonella, Campylobacter, and Shiga Toxin–producingEscherichia coliInfections, Australia

Hall, G. V., Yohannes, K., Raupach, J. C. A., Becker, N. G., & Kirk, M. (2008) · Emerging infectious diseases · doi:10.3201/eid1410.071042 · Cited by 93 · see citing works

Pleiotropic effects of rfa-gene mutations on Escherichia coli envelope properties

Pagnout, C., Sohm, B., Razafitianamaharavo, A., Caillet, C., Offroy, M., Leduc, M., Gendre, H., Jomini, S., Beaussart, A., Bauda, P., et al. (2019) · Scientific Reports · doi:10.1038/s41598-019-46100-3 · Cited by 81 · see citing works

The process of infection with bacteriophage φX174

Newbold, J. E., & Sinsheimer, R. L. (1970) · Journal of Molecular Biology · doi:10.1016/0022-2836(70)90375-x · Cited by 81 · see citing works

Fitness Trade-Offs in Phage Cocktail-Resistant Salmonella enterica Serovar Enteritidis Results in Increased Antibiotic Susceptibility and Reduced Virulence

Gao, D., Ji, H., Wang, L., Li, X., Hu, D., Zhao, J., Wang, S., Pan, T., Li, X., & Qian, P. (2022) · Microbiology Spectrum · doi:10.1128/spectrum.02914-22 · Cited by 80 · see citing works

Role of bacteriophages in shaping gut microbial community

Mahmud, M. R., Tamanna, S. K., Akter, S., Mazumder, L., Akter, S., Hasan, M. R., Acharjee, M., Esti, I. Z., Islam, M. S., Shihab, M., et al. (2024) · Gut Microbes · doi:10.1080/19490976.2024.2390720 · Cited by 67 · see citing works

Quantitative Risk Assessment Model of Human Salmonellosis Resulting from Consumption of Broiler Chicken

Akil, L., & Ahmad, H. A. (2019) · Diseases · doi:10.3390/diseases7010019 · Cited by 65 · see citing works

The microviridae: Diversity, assembly, and experimental evolution

Doore, S. M., & Fane, B. A. (2016) · Virology · doi:10.1016/j.virol.2016.01.020 · Cited by 65 · see citing works

Structural Studies of Bacteriophage α3 Assembly

Bernal, R. A., Hafenstein, S. L., Olson, N. H., Bowman, V. D., Chipman, P. R., Baker, T. S., Fane, B. A., & Rossmann, M. G. (2002) · Journal of Molecular Biology · doi:10.1016/s0022-2836(02)01201-9 · Cited by 64 · see citing works

Adaptations of intracellular bacteria to vacuolar or cytosolic niches

Petit, T. J. P., & Lebreton, A. (2022) · Trends in Microbiology · doi:10.1016/j.tim.2022.01.015 · Cited by 63 · see citing works

Bacteriophage PhiX174's Ecological Niche and the Flexibility of Its Escherichia coli Lipopolysaccharide Receptor

Michel, A. C., Clermont, O., Denamur, É., & Tenaillon, O. (2010) · Applied and Environmental Microbiology · doi:10.1128/aem.02721-09 · Cited by 61 · see citing works

Importance of codon usage for the temporal regulation of viral gene expression

Shin, Y. C., Bischof, G., Lauer, W. A., & Desrosiers, R. C. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1515387112 · Cited by 55 · see citing works

Structural changes of tailless bacteriophage ΦX174 during penetration of bacterial cell walls

Sun, Y., Roznowski, A. P., Tokuda, J. M., Klose, T., Mauney, A., Pollack, L., Fane, B. A., & Rossmann, M. G. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1716614114 · Cited by 53 · see citing works

Specific Integration of Temperate Phage Decreases the Pathogenicity of Host Bacteria

Chen, Y., Yang, L., Yang, D., Song, J., Wang, C., Sun, E., Gu, C., Chen, H., Tong, Y., Pan, T., et al. (2020) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2020.00014 · Cited by 49 · see citing works

Atomic Structure of the Degraded Procapsid Particle of the Bacteriophage G4: Induced Structural Changes in the Presence of Calcium Ions and Functional Implications

McKENNA, R. V., Bowman, B. R., Ilag, L. L., Rossmann, M. G., & Fane, B. A. (1996) · Journal of Molecular Biology · doi:10.1006/jmbi.1996.0121 · Cited by 48 · see citing works

Cryo-EM structure of the periplasmic tunnel of T7 DNA-ejectosome at 2.7 Å resolution

Swanson, N. A., Lokareddy, R. K., Li, F., Hou, C.-F. D., Leptihn, S., Pavlenok, M., Niederweis, M., Pumroy, R. A., Moiseenkova‐Bell, V. Y., & Cingolani, G. (2021) · Molecular Cell · doi:10.1016/j.molcel.2021.06.001 · Cited by 48 · see citing works

Organizing the Global Diversity of Microviruses

Kirchberger, P. C., Martinez, Z. A., & Ochman, H. (2022) · mBio · doi:10.1128/mbio.00588-22 · Cited by 43 · see citing works

Current and future directions in bacteriophage research for developing therapeutic innovations

Cui, L., Kiga, K., Kondabagil, K., & Węgrzyn, A. (2024) · Scientific Reports · doi:10.1038/s41598-024-76427-5 · Cited by 36 · see citing works

NEBNext Direct: A Novel, Rapid, Hybridization‐Based Approach for the Capture and Library Conversion of Genomic Regions of Interest

Emerman, A. B., Bowman, S., Barry, A. J., Henig, N., Patel, K. M., Gardner, A. F., & Hendrickson, C. L. (2017) · Current Protocols in Molecular Biology · doi:10.1002/cpmb.39 · Cited by 34 · see citing works

A mutation in the methionine aminopeptidase gene provides phage resistance in Streptococcus thermophilus

Labrie, S. J., Mosterd, C., Loignon, S., Dupuis, M.-È., Desjardins, P. R., Rousseau, G. M., Tremblay, D. M., Romero, D. A., Horvath, P., Fremaux, C., et al. (2019) · Scientific Reports · doi:10.1038/s41598-019-49975-4 · Cited by 33 · see citing works

Characterisation of a newly detected bacteriophage infecting Bordetella bronchiseptica in swine

Chen, Y., Yang, L., Sun, E., Song, J., & Wu, B. (2018) · Archives of Virology · doi:10.1007/s00705-018-4034-0 · Cited by 30 · see citing works

Eliminating the Requirement of an Essential Gene Product in an Already Very Small Virus: Scaffolding Protein B-free øX174, B-free

Chen, M., Uchiyama, A., & Fane, B. A. (2007) · Journal of Molecular Biology · doi:10.1016/j.jmb.2007.07.064 · Cited by 29 · see citing works

Advances in Cryo-Correlative Light and Electron Microscopy: Applications for Studying Molecular and Cellular Events

Jun, S., Ro, H., Bharda, A. V., Kim, S. I., Jeoung, D., & Jung, H. S. (2019) · The Protein Journal · doi:10.1007/s10930-019-09856-1 · Cited by 28 · see citing works

Host Resistance, Genomics and Population Dynamics in a Salmonella Enteritidis and Phage System

Holguín, A. V., Cárdenas, P., Prada-Peñaranda, C., Leite, L. R., Buitrago, C. A., Clavijo, V., Oliveira, G., Leekitcharoenphon, P., Aarestrup, F. M., & Vives, M. J. (2019) · Viruses · doi:10.3390/v11020188 · Cited by 26 · see citing works

Adaptive evolution and inherent tolerance to extreme thermal environments

Cox, J., Schubert, A. M., Travisano, M., & Putonti, C. (2010) · BMC Evolutionary Biology · doi:10.1186/1471-2148-10-75 · Cited by 25 · see citing works

Behind the chlamydial cloak: The replication cycle of chlamydiaphage Chp2, revealed

Salim, O., Skilton, R. J., Lambden, P. R., Fane, B. A., & Clarke, I. N. (2008) · Virology · doi:10.1016/j.virol.2008.05.001 · Cited by 25 · see citing works

Genic Incompatibilities in Two Hybrid Bacteriophages

Rokyta, D. R., & Wichman, H. A. (2009) · Molecular Biology and Evolution · doi:10.1093/molbev/msp199 · Cited by 24 · see citing works

Characterization, genome analysis, and therapeutic evaluation of a novel Salmonella phage vB_SalS_JNS02: a candidate bacteriophage for phage therapy

Li, L., Fan, R., Chen, Y., Zhang, Q., Zhao, X., Hu, M., Lv, Q., Luo, Y., Xu, X., Cai, Y., et al. (2024) · Poultry Science · doi:10.1016/j.psj.2024.103845 · Cited by 23 · see citing works

Evolution of a bistable genetic system in fluctuating and nonfluctuating environments

Fernández-Fernández, R., Olivenza, D. R., Weyer, E., Singh, A., Casadesús, J., & Sánchez-Romero, M. A. (2024) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2322371121 · Cited by 21 · see citing works

Phage-driven coevolution reveals trade-off between antibiotic and phage resistance in Salmonella anatum

Zhao, Y., Shu, M., Zhang, L., Zhong, C., Liao, N., & Wu, G. (2024) · ISME Communications · doi:10.1093/ismeco/ycae039 · Cited by 20 · see citing works

Intergenic incompatibilities reduce fitness in hybrids of extremely closely related bacteriophages

Sackman, A. M., Reed, D., & Rokyta, D. R. (2015) · PeerJ · doi:10.7717/peerj.1320 · Cited by 15 · see citing works

Phage Engineering for Targeted Multidrug-Resistant Escherichia coli

Song, J., Liu, Z., Zhang, Q., Liu, Y., & Chen, Y. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24032459 · Cited by 14 · see citing works

Evolutionary Adaptation of an RNA Bacteriophage to Repeated Freezing and Thawing Cycles

Laguna-Castro, M., Rodríguez-Moreno, A., & Lázaro, E. (2024) · International Journal of Molecular Sciences · doi:10.3390/ijms25094863 · Cited by 7 · see citing works

Phage protein Gp11 blocks Staphylococcus aureus cell division by inhibiting peptidoglycan biosynthesis

Xu, Q., Tang, L., Liu, W., Xu, N., Hu, Y., Zhang, Y., & Chen, S. (2024) · mBio · doi:10.1128/mbio.00679-24 · Cited by 7 · see citing works

Cryo-EM Structure of Gokushovirus ΦEC6098 Reveals a Novel Capsid Architecture for a Single-Scaffolding Protein, Microvirus Assembly System

Lee, H., Baxter, A. J., Bator, C. M., Fane, B. A., & Hafenstein, S. L. (2022) · Journal of Virology · doi:10.1128/jvi.00990-22 · Cited by 6 · see citing works

Penton blooming, a conserved mechanism of genome delivery used by disparate microviruses

Bardy, P., MacDonald, C. I. W., Kirchberger, P. C., Jenkins, H. T., Botka, T., Byrom, L., Alim, N. T. B., Traore, D. A. K., Koenig, H. C., Nicholas, T. R., et al. (2025) · mBio · doi:10.1128/mbio.03713-24 · Cited by 5 · see citing works

The Structure of Spiroplasma Virus 4: Exploring the Capsid Diversity of the Microviridae

Mietzsch, M., Kailasan, S., Bennett, A. D., Chipman, P. R., Fane, B. A., Huiskonen, J. T., Clarke, I. N., & McKENNA, R. V. (2024) · Viruses · doi:10.3390/v16071103 · Cited by 5 · see citing works

Crystal structure of the phage-encoded N-acetyltransferase in complex with acetyl-CoA, revealing a novel dimeric arrangement

Ki, N., Jo, I., Hyun, Y., Lee, J., Ha, N., & Oh, H. (2022) · The Journal of Microbiology · doi:10.1007/s12275-022-2030-2 · Cited by 3 · see citing works

Evolutionary interplay between structure, energy and epistasis in the coat protein of the ϕX 174 phage family

Redondo, R. A. F., de Vladar, H. P., Włodarski, T., & Bollback, J. P. (2017) · Journal of The Royal Society Interface · doi:10.1098/rsif.2016.0139 · Cited by 3 · see citing works

Generative design of bacteriophages with genome language models

King, S. B., Driscoll, C. L., Li, D. B., Guo, D., Merchant, A. T., Brixi, G., Wilkinson, M. E., & Hie, B. (2026) · Science · doi:10.1126/science.aec2657 · Cited by 77 · see citing works

ABCD-type phage cocktail targeting distinct LPS receptor sites demonstrates superior efficacy against multidrug-resistant Salmonella

Chen, Y., Wang, X., Zhang, Q., Zhang, Z., Liu, Z., Zhao, X., Li, L., Hu, M., Lv, Q., Luo, Y., et al. (2025) · Journal of Hazardous Materials · doi:10.1016/j.jhazmat.2025.140435 · Cited by 7 · see citing works

Exploring the Antibacterial Properties of a Newly Isolated Microviridae Phage Against Multidrug-Resistant Escherichia coli

Kizheva, Y. K., Pandova, M., Urshev, Z. L., Gladicheva, Y., Paunova-Krasteva, T. S., Ivanov, S., & Hristova, P. (2026) · Pathogens · doi:10.3390/pathogens15030330

Developing Antiviral Vaccines Based on Attenuated Salmonella

Ou, E., & Liu, F. (2026) · Pathogens · doi:10.3390/pathogens15090955

A Structural Voyage Across the Size Spectrum: Architecture of Salmonella Phages from Microviridae to JumboPreprint

Fan, C., Wei, Y., Zhang, W., Yang, H., & Gao, Y. (2026) · Preprints.org · doi:10.20944/preprints202610.1640.v1

2S-B1-4Structural Analysis of Staphylococcus Phages by Cryo-electron Microscopy, Aimed for the Application of Phage Therapy

Miyazaki, N., Uchiyama, J., Matsuzaki, S., Murata, K., & Iwasaki, K. (2017) · Microscopy · doi:10.1093/jmicro/dfx057

Exploring the Antibacterial Properties of a Newly Isolated Microviridae Phage Against Multidrug-Resistant Escherichia coli

Kizheva, Y. K., Pandova, M., Urshev, Z. L., Gladicheva, Y., Paunova-Krasteva, T. S., Ivanov, S., & Hristova, P. (2026) · Pathogens · doi:10.3390/pathogens15030330

Cryo-electron microscopy structure of Jabs, a bacteriophage infecting the multidrug-resistant pathogen Mycobacterium abscessusPreprint

Cambillau, C., Liew, J. H., Tan, B. S. Y., Kremer, L., Bifani, P., & Goulet, A. (2026) · HAL

Cryo-EM structures of prevalent gut phage PD491P1 uncover extensive disulfide stabilization and distinct structural adaptations

Cai, C., Wang, A., Shao, Q., Zhang, J., Wang, Y., Hu, H., Yuan, K., Li, L., Wang, X., Fang, Q., et al. (2026) · Structure · doi:10.1016/j.str.2026.04.005 · Cited by 1 · see citing works