The DOI matches its Crossref record; 6 of the 6 references it cites were found in a registry or an index.
The impact of rearing environment on the development of gut microbiota in tilapia larvae
Open accessAbstract
This study explores the effect of rearing environment on water bacterial communities (BC) and the association with those present in the gut of Nile tilapia larvae (Oreochromis niloticus, Linnaeus) grown in either recirculating or active suspension systems. 454 pyrosequencing of PCR-amplified 16S rRNA gene fragments was applied to characterize the composition of water, feed and gut bacteria communities. Observed changes in water BC over time and differences in water BCs between systems were highly correlated with corresponding water physico-chemical properties. Differences in gut bacterial communities during larval development were correlated with differences in water communities between systems. The correlation of feed BC with those in the gut was minor compared to that between gut and water, reflected by the fact that 4 to 43 times more OTUs were shared between water and gut than between gut and feed BC. Shared OTUs between water and gut suggest a successful transfer of microorganisms from water into the gut and give insight about the niche and ecological adaptability of water microorganisms inside the gut. These findings suggest that steering of gut microbial communities could be possible through water microbial management derived by the design and functionality of the rearing system.
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QIIME allows analysis of high-throughput community sequencing data
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., Gordon, J. I., et al. (2010) · Nature Methods · doi:10.1038/nmeth.f.303 · Cited by 34,887
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Quast, C., Pruesse, E., Yilmaz, P., Gerken, J., Schweer, T., Yarza, P., Peplies, J., & Glöckner, F. O. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks1219 · Cited by 33,055
Gut microbiota in health and disease
Sekirov, I., Russell, S. L., Antunes, L. C. M., & Finlay, B. B. (2010) · Physiological Reviews · doi:10.1152/physrev.00045.2009 · Cited by 4,182
The Effect of Diet on the Human Gut Microbiome: A Metagenomic Analysis in Humanized Gnotobiotic Mice
Turnbaugh, P. J., Ridaura, V. K., Faith, J. J., Rey, F. E., Knight, R., & Gordon, J. I. (2009) · Science Translational Medicine · doi:10.1126/scitranslmed.3000322 · Cited by 3,058
Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans
Muegge, B. D., Kuczynski, J., Knights, D., Clemente, J. C., González, A., Fontana, L., Henrissat, B., Knight, R., & Gordon, J. I. (2011) · Science · doi:10.1126/science.1198719 · Cited by 1,988
Role of gastrointestinal microbiota in fish
Nayak, S. K. (2010) · Aquaculture Research · doi:10.1111/j.1365-2109.2010.02546.x · Cited by 1,073
Cited by
Vadstein, O., Attramadal, K. J. K., Bakke, I., & Olsen, Y. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.02730 · Cited by 167
Ikeda-Ohtsubo, W., Brugman, S., Warden, C. H., Rebel, J. M. J., Folkerts, G., & Pieterse, C. M. J. (2018) · Frontiers in Nutrition · doi:10.3389/fnut.2018.00090 · Cited by 115
Zanuzzo, F. S., Beemelmanns, A., Hall, J. R., Rise, M. L., & Gamperl, A. K. (2020) · Frontiers in Immunology · doi:10.3389/fimmu.2020.01009 · Cited by 62
Giraud, C., Callac, N., Boulo, V., Lam, J.-S., Pham, D., Selmaoui-Folcher, N., & Wabete, N. (2022) · Frontiers in Microbiology · doi:10.3389/fmicb.2022.886752 · Cited by 26
Metadata
- Authors
- Giatsis, C., Sipkema, D., Smidt, H., Heilig, H., Benvenuti, G., Verreth, J., & Verdegem, M.
- Venue
- Scientific Reports
- Published
- 2015-12-11
- Volume
- 5
- Issue
- 1
- Pages
- 18206-18206
- ISSN
- 2045-2322 (ISSN-L)
- OpenAlex
- W2195442889
- Cited by
- 301
- References
- 6
- FWCI
- 6.60
- Type
- journal article
- Language
- en
- Open access
- gold
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- Giatsis, C., Sipkema, D., Smidt, H., Heilig, H., Benvenuti, G., Verreth, J., & Verdegem, M. (2015). The impact of rearing environment on the development of gut microbiota in tilapia larvae. Scientific Reports. https://doi.org/10.1038/srep18206
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