Structure-based screening and optimization of cytisine derivatives as inhibitors of the menin–MLL interaction
Open accessAbstract
A natural product-like compound was identified as a direct inhibitor of the menin–MLL interaction after in silico screening and structural modification.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In leukemia, the MLL protein interacts with menin to promote oncogenic activity.
“For example, in leukemia, the mixed lineage leukemia (MLL) protein interacts with menin to promote oncogenic activity.”
From The design and development of covalent protein-protein interaction inhibitors for cancer treatment (2020) · cites this paper as [101]
Developing small molecule inhibitors to directly disrupt the MLL-menin interaction is a potential strategy for leukemia treatment.
“Therefore, developing small molecule inhibitors to directly disrupt the MLL-menin interaction is a potential strategy for leukemia treatment [100, 101].”
From The design and development of covalent protein-protein interaction inhibitors for cancer treatment (2020) · cites this paper as [101]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
MLL translocations, histone modifications and leukaemia stem-cell development
Krivtsov, A., & Armstrong, S. (2007) · Nature Reviews. Cancer · doi:10.1038/nrc2253 · Cited by 1,294 · see citing works
Hijacked in cancer: the MLL/KMT2 family of methyltransferases
Rao, R., & Dou, Y. (2015) · Nature Reviews. Cancer · doi:10.1038/nrc3929 · Cited by 558 · see citing works
Menin Critically Links MLL Proteins with LEDGF on Cancer-Associated Target Genes
Yokoyama, A., & Cleary, M. L. (2008) · Cancer Cell · doi:10.1016/j.ccr.2008.05.003 · Cited by 550 · see citing works
Menin-MLL inhibitors reverse oncogenic activity of MLL fusion proteins in leukemia
Grembecka, J. E., He, S., Shi, A., Purohit, T., Muntean, A. G., Sorenson, R. J., Showalter, H. D., Murai, M. J., Belcher, A. M., Hartley, T., et al. (2012) · Nature Chemical Biology · doi:10.1038/nchembio.773 · Cited by 468 · see citing works
Trithorax group proteins: switching genes on and keeping them active
Schuettengruber, B., Martinez, A., Iovino, N., & Cavalli, G. (2011) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3230 · Cited by 454 · see citing works
Pharmacologic inhibition of the menin-MLL interaction blocks progression of MLL leukemia in vivo
Borkin, D., He, S., Miao, H., Kempińska, K., Pollock, J., Chase, J., Purohit, T., Malik, B., Zhao, T., Wang, J.-Y., et al. (2015) · Cancer Cell · doi:10.1016/j.ccell.2015.02.016 · Cited by 350 · see citing works
Shi, A., Murai, M. J., He, S., Lund, G., Hartley, T., Purohit, T., Reddy, G., Chruszcz, M., Grembecka, J. E., & Cierpicki, T. (2012) · Blood · doi:10.1182/blood-2012-05-429274 · Cited by 205 · see citing works
Tang, Z., Chen, W., Shimada, M., Nguyen, U. T. T., Kim, J., Sun, X., Sengoku, T., McGinty, R. K., Fernandez, J., Muir, T. W., et al. (2013) · Cell · doi:10.1016/j.cell.2013.06.027 · Cited by 165 · see citing works
Liu, L., Leung, K., Chan, D. S.-H., Wang, Y.-T., Ma, D., & Leung, C.-H. (2014) · Cell Death and Disease · doi:10.1038/cddis.2014.250 · Cited by 123 · see citing works
Self-citationShinsky, S. A., Monteith, K. E., Viggiano, S. C., & Cosgrove, M. S. (2015) · Journal of Biological Chemistry · doi:10.1074/jbc.m114.627646 · Cited by 116 · see citing works
He, S., Senter, T. J., Pollock, J., Han, C., Upadhyay, S. K., Purohit, T., Gogliotti, R. D., Lindsley, C. W., Cierpicki, T., Stauffer, S. R., et al. (2014) · Journal of Medicinal Chemistry · doi:10.1021/jm401868d · Cited by 99 · see citing works
Challenges and Opportunities in Targeting the Menin–MLL Interaction
Cierpicki, T., & Grembecka, J. E. (2014) · Future Medicinal Chemistry · doi:10.4155/fmc.13.214 · Cited by 90 · see citing works
Menin promotes hepatocellular carcinogenesis and epigenetically up-regulates Yap1 transcription
Xu, B., Li, S.-H., Zheng, R. Q., Gao, S.-B., Ding, L., Yin, Z., Lin, X., Feng, Z.-J., Zhang, S., Wang, X., et al. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1312022110 · Cited by 82 · see citing works
Abagyan, R. A., Batalov, S., Cardozo, T. J., Totrov, M. M., Webber, J., & Zhou, Y. (1997) · Proteins Structure Function and Bioinformatics · doi:10.1002/(sici)1097-0134(1997)1+ · Cited by 78 · see citing works
Ohashi, K., Kiuchi, T., Shoji, K., Sampei, K., & Mizuno, K. (2012) · BioTechniques · doi:10.2144/000113777 · Cited by 65 · see citing works
The functional and mechanistic relatedness of EZH2 and menin in hepatocellular carcinoma
Gao, S.-B., Xu, B., Ding, L., Zheng, Q., Zhang, L., Zheng, Q., Li, S.-H., Feng, Z.-J., Wei, J., Yin, Z., et al. (2014) · Journal of Hepatology · doi:10.1016/j.jhep.2014.05.015 · Cited by 62 · see citing works
Cierpicki, T., & Grembecka, J. (2015) · Immunological Reviews · doi:10.1111/imr.12244 · Cited by 53 · see citing works
Zhong, Z., Liu, L., Dong, Z., Lu, L., Wang, M., Leung, C., Ma, D., & Wang, Y. (2015) · Chemical Communications · doi:10.1039/c5cc02728d · Cited by 52 · see citing works
Self-citationVirtual screening and optimization of Type II inhibitors of JAK2 from a natural product library
Ma, D., Chan, D. S., Guo, W., Zhong, H., Yang, H., Leung, L. T., Gullen, E. A., Chiu, P., Cheng, Y., & Leung, C. (2014) · Chemical Communications · doi:10.1039/c4cc04498c · Cited by 42 · see citing works
Self-citationWu, X., & Hua, X. (2008) · Current Molecular Medicine · doi:10.2174/156652408786733702 · Cited by 40 · see citing works
Natural Products as a Source of Drug Leads to Overcome Drug Resistance
Silver, L. L. (2015) · Future Microbiology · doi:10.2217/fmb.15.67 · Cited by 36 · see citing works
Discovery of deoxyvasicinone derivatives as inhibitors of NEDD8-activating enzyme
Zhong, H., Leung, K., Lin, S., Chan, D. S., Han, Q., Chan, S. L., Ma, D., & Leung, C. (2014) · Methods · doi:10.1016/j.ymeth.2014.08.014 · Cited by 25 · see citing works
Self-citationBayo, J., Dalvi, M. P., & Martínez, E. D. (2015) · Future Medicinal Chemistry · doi:10.4155/fmc.15.140 · Cited by 12 · see citing works
In silico identification of natural product inhibitors of JAK2
Zhong, H., Lin, S., Tam, I. L., Lu, L., Chan, D. S., Ma, D., & Leung, C. (2014) · Methods · doi:10.1016/j.ymeth.2014.07.003 · Cited by 10 · see citing works
Self-citation
Flagged first, then by citations
Research works printed but not linked: 20
- This journal is © The Royal Society of Chemistry 20xx
- R. C. Rao and Y. Dou, Nat. Rev. Cancer, 2015, 15, 334-346.
- A. V. Krivtsov and S. A. Armstrong, Nat. Rev. Cancer, 2007, 7, 823-833.
- B. Schuettengruber, A.-M. Martinez, N. Iovino and G. Cavalli, Nat. Rev. Mol. Cell Biol., 2011, 12, 799-814.
- Z. Tang, W.-Y. Chen, M. Shimada, Uyen T. T. Nguyen, J. Kim, X.-J. Sun, T. Sengoku, Robert K. McGinty, Joseph P. Fernandez, Tom W. Muir and Robert G. Roeder, Cell, 2013, 154, 297-310.
- S. A. Shinsky, K. E. Monteith, S. Viggiano and M. S. Cosgrove, J. Biol. Chem., 2015, 290, 6361-6375.
- S.-B. Gao, B. Xu, L.-H. Ding, Q.-L. Zheng, L. Zhang, Q.-F. Zheng, S.-H. Li, Z.-J. Feng, J. Wei, Z.-Y. Yin, X. Hua and G.-H. Jin, J. Hepatol., 2014, 61, 832-839.
- B. Xu, S.-H. Li, R. Zheng, S.-B. Gao, L.-H. Ding, Z.-Y. Yin, X. Lin, Z.-J. Feng, S. Zhang, X.-M. Wang and G.-H. Jin, Proc. Natl. Acad. Sci., 2013, 110, 17480-17485.
- A. Yokoyama and M. L. Cleary, Cancer Cell, 2008, 14, 36-46.
- D. Borkin, S. He, H. Miao, K. Kempinska, J. Pollock, J. Chase, T. Purohit, B. Malik, T. Zhao, J. Wang, B. Wen, H. Zong, M. Jones, G. Danet-Desnoyers, Monica L. Guzman, M. Talpaz, Dale L. Bixby, D. Sun, Jay L. Hess, Andrew G. Muntean, I. Maillard, T. Cierpicki and J. Grembecka, Cancer Cell, 2015, 27, 589-602.
- J. Bayo, M. P. Dalvi and E. D. Martinez, Future Med. Chem., 2015, 7, 2243-2261.
- A. Shi, M. J. Murai, S. He, G. Lund, T. Hartley, T. Purohit, G. Reddy, M. Chruszcz, J. Grembecka and T. Cierpicki, Blood, 2012, 120, 4461-4469.
- T. Cierpicki and J. Grembecka, Future Med. Chem., 2014, 6, 447-462.
- S. He, T. J. Senter, J. Pollock, C. Han, S. K. Upadhyay, T. Purohit, R. D. Gogliotti, C. W. Lindsley, T. Cierpicki, S. R. Stauffer and J. Grembecka, J. Med. Chem., 2014, 57, 1543- 1556.
- T. Cierpicki and J. Grembecka, Immunol. Rev., 2015, 263, 279-301.
- L. L. Silver, Future Microbiol., 2015, 10, 1711-1718.
- A. Shi, M. J. Murai, S. He, G. Lund, T. Hartley, T. Purohit, G. Reddy, M. Chruszcz, J. Grembecka and T. Cierpicki, Blood, 2012, 120, 4461-4469.
- J. Grembecka, S. He, A. Shi, T. Purohit, A. G. Muntean, R. J. Sorenson, H. D. Showalter, M. J. Murai, A. M. Belcher, T. Hartley, J. L. Hess and T. Cierpicki, Nat. Chem. Biol., 2012, 8, 277-284.
- K. Ohashi, T. Kiuchi, K. Shoji, K. Sampei and K. Mizuno, Biotechniques, 2012, 52, 45-50.
- X. Wu and X. Hua, Curr. Mol. Med., 2008, 8, 805-815.
Cited by
Sorted by citations
Targeting MCL-1 in cancer: current status and perspectives
Wang, H., Guo, M., Wei, H., & Chen, Y. (2021) · Journal of Hematology & Oncology · doi:10.1186/s13045-021-01079-1 · Cited by 313 · see citing works
In silico polypharmacology of natural products
Fang, J., Liu, C., Wang, Q., Lin, P., & Cheng, F. (2017) · Briefings in Bioinformatics · doi:10.1093/bib/bbx045 · Cited by 164 · see citing works
Strategies for targeting undruggable targets
Zhang, G., Zhang, J., Gao, Y., Li, Y., & Li, Y. (2021) · Expert Opinion on Drug Discovery · doi:10.1080/17460441.2021.1969359 · Cited by 102 · see citing works
The design and development of covalent protein-protein interaction inhibitors for cancer treatment
Cheng, S.-S., Yang, G.-J., Wang, W., Leung, C.-H., & Ma, D.-L. (2020) · Journal of Hematology & Oncology · doi:10.1186/s13045-020-00850-0 · Cited by 98 · see citing works
Self-citationLi, X., & Song, Y. (2021) · Journal of Hematology & Oncology · doi:10.1186/s13045-021-01057-7 · Cited by 79 · see citing works
Cytisine and cytisine derivatives. More than smoking cessation aids
Gotti, C., & Clementi, F. (2021) · Pharmacological Research · doi:10.1016/j.phrs.2021.105700 · Cited by 77 · see citing works
Yang, G., Ko, C.-N., Zhong, H., Leung, C., & Ma, D. (2019) · Cancers · doi:10.3390/cancers11010092 · Cited by 74 · see citing works
Self-citationFu, Y., Sun, Y.-N., Yi, K., Li, M., Cao, H., Li, J., & Ye, F. (2017) · Molecules · doi:10.3390/molecules22060959 · Cited by 59 · see citing works
Ko, C.-N., Yang, C., Lin, S., Li, S., Dong, Z., Liu, J., Lee, S. M., Leung, C., & Ma, D. (2017) · Biosensors and Bioelectronics · doi:10.1016/j.bios.2017.03.050 · Cited by 51 · see citing works
Self-citationTargeting epigenetic machinery: Emerging novel allosteric inhibitors
Ye, F., Huang, J. L., Wang, H., Luo, C., & Zhao, K. (2019) · Pharmacology & Therapeutics · doi:10.1016/j.pharmthera.2019.107406 · Cited by 45 · see citing works
Yang, C., Wang, W., Chen, L., Liang, J., Lin, S., Lee, M.-Y., Ma, D., & Leung, C. (2016) · Chemical Communications · doi:10.1039/c6cc04938a · Cited by 42 · see citing works
Self-citationMimicking Strategy for Protein–Protein Interaction Inhibitor Discovery by Virtual Screening
Wu, K., Lei, P.-M., Liu, H., Chun, W., Leung, C., & Ma, D. (2019) · Molecules · doi:10.3390/molecules24244428 · Cited by 35 · see citing works
Self-citationAnticancer osmium complex inhibitors of the HIF-1α and p300 protein-protein interaction
Yang, C., Wang, W., Li, G., Zhong, H., Dong, Z., Wong, C., Kwong, D. W. J., Ma, D., & Leung, C. (2017) · Scientific Reports · doi:10.1038/srep42860 · Cited by 32 · see citing works
Self-citationLei, H., Zhang, S., Fan, S., Bai, H., Zhao, H., Mao, S., & Xin, M. (2021) · Journal of Medicinal Chemistry · doi:10.1021/acs.jmedchem.1c00872 · Cited by 28 · see citing works
Liu, K., Chen, X., Ren, Y., Liu, C., Lv, T., Liu, Y., & Zhang, Y. (2022) · Chemico-Biological Interactions · doi:10.1016/j.cbi.2022.110239 · Cited by 25 · see citing works
Huang, X., Lv, M., & Xu, H. (2019) · Pest Management Science · doi:10.1002/ps.5375 · Cited by 18 · see citing works
Huang, X., & Xu, H. (2019) · Mini-Reviews in Medicinal Chemistry · doi:10.2174/1389557519666191104121821 · Cited by 16 · see citing works
Targeting protein-protein interaction between MLL1 and reciprocal proteins for leukemia therapy
Wang, Z.-H., Li, D.-D., Chen, W.-L., You, Q.-D., & Guo, X.-K. (2018) · Bioorganic & Medicinal Chemistry · doi:10.1016/j.bmc.2017.11.045 · Cited by 16 · see citing works
Discovery of cysteine-targeting covalent histone methyltransferase inhibitors
Zhao, Y., Jiang, B., Gu, Z., Chen, T., Yu, W. H., Liu, S., Liu, X., Chen, D., Li, F., & Chen, W. (2022) · European Journal of Medicinal Chemistry · doi:10.1016/j.ejmech.2022.115028 · Cited by 13 · see citing works
Ubiquitination Regulators Discovered by Virtual Screening for the Treatment of Cancer
Song, Y., Chun, W., Wu, K., Han, Q., Miao, X., Ma, D., & Leung, C. (2021) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2021.665646 · Cited by 12 · see citing works
Self-citationDysregulation of HOXA genes in acute myeloid leukemia and targeted therapy
Huang, W., Zhang, F., Zhang, Z., Wang, Q., & Chen, S. (2025) · npj Precision Oncology · doi:10.1038/s41698-025-01200-4 · Cited by 9 · see citing works
Polypharmacology and Natural Products
Wang, Z., & Yang, B. (2022) · Springer eBooks · doi:10.1007/978-3-031-04998-9_15 · Cited by 7 · see citing works
Bao, J., Wang, Y., Wang, S., Niu, D., Wang, Z., Li, R., Zheng, Y., Ishfaq, M., Wu, Z., & Li, J. (2022) · Frontiers in Veterinary Science · doi:10.3389/fvets.2022.972245 · Cited by 7 · see citing works
Menin signaling and therapeutic targeting in breast cancer
Liu, P., Shi, C., Qiu, L., Shang, D., Tu, Z., Tu, Z., & Liu, H. (2024) · Current Problems in Cancer · doi:10.1016/j.currproblcancer.2024.101118 · Cited by 7 · see citing works
Parrino, B., Cascioferro, S., Carbone, D., Cirrincione, G., & Diana, P. (2020) · Advances in heterocyclic chemistry · doi:10.1016/bs.aihch.2019.11.004 · Cited by 7 · see citing works
Wang, X., Li, R., Zou, Y., & Wang, J. (2025) · Journal of Ethnopharmacology · doi:10.1016/j.jep.2025.120451 · Cited by 6 · see citing works
Insights into the Cardiotoxic Effects of Veratrum Lobelianum Alkaloids: Pilot Study
Taldaev, A., Terekhov, R. P., Melnik, E. V., Belova, M. V., Kozin, S. V., Nedorubov, A. A., Pomerantseva, T. Y., & Ramenskaya, G. V. (2022) · Toxins · doi:10.3390/toxins14070490 · Cited by 6 · see citing works
Pokhodylo, N. T., Shyyka, O. Y., Slyvka, Y., Goreshnik, E., & Obushak, M. D. (2021) · Journal of Molecular Structure · doi:10.1016/j.molstruc.2021.130487 · Cited by 6 · see citing works
Ning, F., Zhu, H., Yan, H., Liu, J., Aziz, S., Hussain, H., Song, X., Xie, L., Meng, Z., Cao, G., et al. (2023) · Journal of Separation Science · doi:10.1002/jssc.202300053 · Cited by 4 · see citing works
Polypharmacology in Drug Design and Discovery—Basis for Rational Design of Multitarget Drugs
Wang, Z., & Yang, B. (2022) · Springer eBooks · doi:10.1007/978-3-031-04998-9_12 · Cited by 3 · see citing works
Drug Design Methods to Regulate Protein–Protein Interactions
Poluri, K. M., Gulati, K., Tripathi, D. K., & Nagar, N. (2023) · Springer eBooks · doi:10.1007/978-981-99-2423-3_6 · Cited by 2 · see citing works
Gandhi, T., Melge, A. R., & Mohan, C. G. (2016) · Journal of Advanced Research · doi:10.1016/j.jare.2016.09.004 · Cited by 2 · see citing works
Eight-Membered Rings With Two Heteroatoms 1,5
Parrino, B., Cascioferro, S., Carbone, D., Cirrincione, G., & Diana, P. (2021) · Elsevier eBooks · doi:10.1016/b978-0-12-818655-8.00146-3 · Cited by 1 · see citing works
Targeting the menin-MLL-LEDGF Interaction with Small Molecule Inhibitors.
Pollock, J. (2016) · Deep Blue (University of Michigan)
Борисов, А. В., Matsulevich, Z. V., Borisova, G. N., Osmanov, V. K., Naumov, V. I., Залепкина, С. А., & Смирнов, В. Ф. (2020) · Russian Journal of General Chemistry · doi:10.1134/s1070363220120336
Wu, Z., Xia, C., Wang, Z., Bao, J., Li, R., Ishfaq, M., & Li, J. (2021) · Research Square · doi:10.21203/rs.3.rs-142256/v1
Shakaroun, R. M. (2021) · theses.fr (ABES) · doi:10.70675/2f088127z472bz4b2fzb9bfza1f8d1bdb9b1
BindingDB (2024) · UC San Diego · doi:10.7270/q25d8x66
- Authors
- Zhong, H.-J., Lee, B. R., Boyle, J. W., Wang, W., Ma, D.-L., Hong Chan, P. W., & Leung, C.-H.
- Affiliations
- University of Macau (MO)
- School of Chemistry
- Monash University (AU)
- Hong Kong Baptist University (HK)
- Corresponding author
- Ma, Dik-Lung
- Leung, Chung-Hang
- Venue
- Chemical Communications
- Publisher
- Royal Society of Chemistry (RSC)
- Published
- 2016
- Volume
- 52
- Issue
- 34
- Pages
- 5788-5791
- ISSN
- 1359-7345 (ISSN-L)
- 1364-548X
- OpenAlex
- W2294856928
- Cited by
- 38
- References
- 24
- Citations by year
- 2025: 2 · 2024: 2 · 2023: 2 · 2022: 6 · 2021: 10 · 2020: 3 · 2019: 5 · 2017: 5 · 2016: 3
- FWCI
- 3.99
- Type
- journal article
- Language
- en
- Open access
- green
- research.monash.edu
- Licence
- other-oa
- Locations
- Chemical Communications (publishedVersion)
- PubMed (publishedVersion)
- Monash University Research Portal (Monash University) (submittedVersion, other-oa)
- HKBU Institutional Repository (Hong Kong Baptist University) (submittedVersion)
- Funders
- Universidade de Macau (MRG023/LCH/2013/ICMS, MRG044/LCH/2015/ICMS, MYRG091(Y3-L2)-ICMS12-LCH, MYRG2015-00137-ICMS-QRCM)
- Health and Medical Research Fund (HMRF/14130522)
- Hong Kong Baptist University (FRG2/14-15/004)
- Science and Technology Development Fund (103/2012/A3)
- Research Grants Council, University Grants Committee (HKBU/201811, HKBU/201913, HKBU/204612)
- National Natural Science Foundation of China (21575121)
- Topics
- Physical Sciences › Computer Science › Computational Theory and Mathematics › Computational Drug Discovery Methods
- Physical Sciences › Chemistry › Organic Chemistry › Synthesis and biological activity
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Sesquiterpenes and Asteraceae Studies
- Keywords
- cytisine derivatives, structure-based drug design, protein-protein interaction inhibitors, natural product-like compounds, structure-activity optimization, Mi-2
- MeSH terms
- Quinolizidine Alkaloids, Alkaloids, Antineoplastic Agents, Azocines, Humans, Models, Molecular, Protein Binding, Histone-Lysine N-Methyltransferase, Proto-Oncogene Proteins, Quinolizines, Structure-Activity Relationship, Myeloid-Lymphoid Leukemia Protein, Hep G2 Cells
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review