Sensitivity of transcription factors to DNA methylation

Héberlé, Éléa, Bardet, Anaïs Flore·2019·Essays in Biochemistry

Cited by (383)

Items 301–383 of 383

  1. Additional file 1 of Specific isoforms of the ubiquitin ligase gene WWP2 are targets of osteoarthritis genetic risk via a differentially methylated DNA sequence
    Jack B. Roberts, Olivia Lucy Georgina Boldvig, Guillaume Aubourg, Sai Tanishq Kanchenapally, Deehan, David J., Sarah J. Rice, John A. Loughlin · 2024 · Figshare
  2. Additional file 3 of Comprehensive analysis of the REST transcription factor regulatory networks in IDH mutant and IDH wild-type glioma cell lines and tumors
    Małgorzata Perycz, Dabrowski, Michal J., Marta Jardanowska, Roura, Adria-Jaume, Bartłomiej Gielniewski, Karolina Stępniak, Michał Dramiński, Iwona Anna Ciechomska, Bożena Kamińska, Bartosz Wojtaś · 2024 · Figshare
  3. Additional file 2 of Identification of Eleutherococcus senticosus NAC transcription factors and their mechanisms in mediating DNA methylation of EsFPS, EsSS, and EsSE promoters to regulate saponin synthesis
    Dong, Jing, Zhao, Xuelei, Song, Xin, Shuo Wang, Xueying Zhao, Baoxiang Liang, Long, Yuehong, Xing, Zhaobin · 2024 · Figshare
  4. Additional file 2 of OLMALINC/OCT4/BMP2 axis enhances osteogenic-like phenotype of renal interstitial fibroblasts to participate in Randall’s plaque formation
    Zewu Zhu, Fang Huang, Yingcheng Jiang, Shuhao Ruan, Liu, Minghui, Youjie Zhang, Li, Yongchao, Chen, Jinbo, Cui, Yu, Zhiyong Chen et al. · 2023 · Figshare
  5. Additional file 14 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  6. Additional file 17 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  7. Additional file 10 of Specific isoforms of the ubiquitin ligase gene WWP2 are targets of osteoarthritis genetic risk via a differentially methylated DNA sequence
    Jack B. Roberts, Olivia Lucy Georgina Boldvig, Guillaume Aubourg, Sai Tanishq Kanchenapally, Deehan, David J., Sarah J. Rice, John A. Loughlin · 2024 · Figshare
  8. Additional file 2 of Regulatory networks driving expression of genes critical for glioblastoma are controlled by the transcription factor c-Jun and the pre-existing epigenetic modifications
    Roura, Adria-Jaume, Paulina Szadkowska, Katarzyna Poleszak, Dabrowski, Michal J., Aleksandra Ellert‐Miklaszewska, Kamil Wojnicki, Iwona Anna Ciechomska, Karolina Stępniak, Bożena Kamińska, Bartosz Wojtaś · 2024 · Figshare
  9. Additional file 5 of Comprehensive analysis of the REST transcription factor regulatory networks in IDH mutant and IDH wild-type glioma cell lines and tumors
    Małgorzata Perycz, Dabrowski, Michal J., Marta Jardanowska, Roura, Adria-Jaume, Bartłomiej Gielniewski, Karolina Stępniak, Michał Dramiński, Iwona Anna Ciechomska, Bożena Kamińska, Bartosz Wojtaś · 2024 · Figshare
  10. Additional file 5 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  11. Additional file 1 of Epigenome-wide DNA methylation profiling of conditioned pain modulation in individuals with non-specific chronic low back pain
    Burel Goodin, Demario S. Overstreet, Terence M. Penn, Rahm J. Bakshi, Quinn, Tammie L., Andrew Sims, Travis Ptacek, Pamela Braboy Jackson, Long, D. Leann, Aroke, Edwin N. · 2022 · Figshare
  12. Additional file 9 of Specific isoforms of the ubiquitin ligase gene WWP2 are targets of osteoarthritis genetic risk via a differentially methylated DNA sequence
    Jack B. Roberts, Olivia Lucy Georgina Boldvig, Guillaume Aubourg, Sai Tanishq Kanchenapally, Deehan, David J., Sarah J. Rice, John A. Loughlin · 2024 · Figshare
  13. Additional file 10 of Comprehensive analysis of the REST transcription factor regulatory networks in IDH mutant and IDH wild-type glioma cell lines and tumors
    Małgorzata Perycz, Dabrowski, Michal J., Marta Jardanowska, Roura, Adria-Jaume, Bartłomiej Gielniewski, Karolina Stępniak, Michał Dramiński, Iwona Anna Ciechomska, Bożena Kamińska, Bartosz Wojtaś · 2024 · Figshare
  14. Additional file 6 of Changes in gene body methylation do not correlate with changes in gene expression in Anthozoa or Hexapoda
    Groves Dixon, Mikhail V. Matz · 2022 · Figshare
  15. Additional file 1 of Regulatory networks driving expression of genes critical for glioblastoma are controlled by the transcription factor c-Jun and the pre-existing epigenetic modifications
    Roura, Adria-Jaume, Paulina Szadkowska, Katarzyna Poleszak, Michał Dąbrowski, Aleksandra Ellert‐Miklaszewska, Kamil Wojnicki, Iwona Anna Ciechomska, Karolina Stępniak, Bożena Kamińska, Bartosz Wojtaś · 2024 · Figshare
  16. Additional file 14 of Comprehensive analysis of the REST transcription factor regulatory networks in IDH mutant and IDH wild-type glioma cell lines and tumors
    Małgorzata Perycz, Dabrowski, Michal J., Marta Jardanowska, Roura, Adria-Jaume, Bartłomiej Gielniewski, Karolina Stępniak, Michał Dramiński, Iwona Anna Ciechomska, Bożena Kamińska, Bartosz Wojtaś · 2024 · Figshare
  17. Additional file 3 of Changes in gene body methylation do not correlate with changes in gene expression in Anthozoa or Hexapoda
    Groves Dixon, Mikhail V. Matz · 2022 · Figshare
  18. Additional file 11 of Translocator protein (18kDA) (TSPO) marks mesenchymal glioblastoma cell populations characterized by elevated numbers of tumor-associated macrophages
    Lorraine Weidner, Julia Lorenz, Stefanie Quach, Frank Braun, Tanja Rothhammer-Hampl, Ammer, Laura-Marie, Arabel Vollmann-Zwerenz, Laura M. Bartos, Franziska J. Dekorsy, Adrien Holzgreve et al. · 2024 · Figshare
  19. Additional file 3 of Translocator protein (18kDA) (TSPO) marks mesenchymal glioblastoma cell populations characterized by elevated numbers of tumor-associated macrophages
    Lorraine Weidner, Julia Lorenz, Stefanie Quach, Frank Braun, Tanja Rothhammer-Hampl, Ammer, Laura-Marie, Arabel Vollmann-Zwerenz, Laura M. Bartos, Franziska J. Dekorsy, Adrien Holzgreve et al. · 2024 · Figshare
  20. Additional file 2 of Kidney-specific methylation patterns correlate with kidney function and are lost upon kidney disease progression
    Naor Sagy, Noa Meyrom, Pazit Beckerman, Oren Pleniceanu, Daniel Zvi Bar · 2024 · Figshare
  21. Additional file 4 of Osteoarthritis genetic risk acting on the galactosyltransferase gene COLGALT2 has opposing functional effects in articulating joint tissues
    Yulia S. Kehayova, Jeremy Mark Wilkinson, Rice, Sarah J., John A. Loughlin · 2023 · Figshare
  22. Additional file 2 of Changes in gene body methylation do not correlate with changes in gene expression in Anthozoa or Hexapoda
    Groves Dixon, Mikhail V. Matz · 2022 · Figshare
  23. Additional file 8 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  24. Additional file 12 of Translocator protein (18kDA) (TSPO) marks mesenchymal glioblastoma cell populations characterized by elevated numbers of tumor-associated macrophages
    Lorraine Weidner, Julia Lorenz, Stefanie Quach, Frank Braun, Tanja Rothhammer-Hampl, Ammer, Laura-Marie, Arabel Vollmann-Zwerenz, Laura M. Bartos, Franziska J. Dekorsy, Adrien Holzgreve et al. · 2024 · Figshare
  25. Additional file 7 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  26. Additional file 8 of Specific isoforms of the ubiquitin ligase gene WWP2 are targets of osteoarthritis genetic risk via a differentially methylated DNA sequence
    Jack B. Roberts, Olivia Lucy Georgina Boldvig, Guillaume Aubourg, Sai Tanishq Kanchenapally, Deehan, David J., Sarah J. Rice, John A. Loughlin · 2024 · Figshare
  27. Additional file 7 of Specific isoforms of the ubiquitin ligase gene WWP2 are targets of osteoarthritis genetic risk via a differentially methylated DNA sequence
    Jack B. Roberts, Olivia Lucy Georgina Boldvig, Guillaume Aubourg, Sai Tanishq Kanchenapally, Deehan, David J., Sarah J. Rice, John A. Loughlin · 2024 · Figshare
  28. Additional file 7 of Changes in gene body methylation do not correlate with changes in gene expression in Anthozoa or Hexapoda
    Groves Dixon, Mikhail V. Matz · 2022 · Figshare
  29. Additional file 12 of Specific isoforms of the ubiquitin ligase gene WWP2 are targets of osteoarthritis genetic risk via a differentially methylated DNA sequence
    Jack B. Roberts, Olivia Lucy Georgina Boldvig, Guillaume Aubourg, Sai Tanishq Kanchenapally, Deehan, David J., Sarah J. Rice, John A. Loughlin · 2024 · Figshare
  30. Additional file 3 of OLMALINC/OCT4/BMP2 axis enhances osteogenic-like phenotype of renal interstitial fibroblasts to participate in Randall’s plaque formation
    Zewu Zhu, Fang Huang, Yingcheng Jiang, Shuhao Ruan, Liu, Minghui, Youjie Zhang, Li, Yongchao, Chen, Jinbo, Cui, Yu, Zhiyong Chen et al. · 2023 · Figshare
  31. Additional file 1 of Identification of Eleutherococcus senticosus NAC transcription factors and their mechanisms in mediating DNA methylation of EsFPS, EsSS, and EsSE promoters to regulate saponin synthesis
    Dong, Jing, Zhao, Xuelei, Song, Xin, Shuo Wang, Xueying Zhao, Baoxiang Liang, Long, Yuehong, Xing, Zhaobin · 2024 · Figshare
  32. Additional file 9 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  33. Additional file 4 of OLMALINC/OCT4/BMP2 axis enhances osteogenic-like phenotype of renal interstitial fibroblasts to participate in Randall’s plaque formation
    Zewu Zhu, Fang Huang, Yingcheng Jiang, Shuhao Ruan, Liu, Minghui, Zhang, Youjie, Li, Yongchao, Chen, Jinbo, Cui, Yu, Zhiyong Chen et al. · 2023 · Figshare
  34. Additional file 2 of Hybrid allele-specific ChIP-seq analysis identifies variation in brassinosteroid-responsive transcription factor binding linked to traits in maize
    Thomas Hartwig, Michael Banf, Gisele Passaia Prietsch, Zhu, Jia-Ying, Isabel Mora-Ramírez, Jos H. M. Schippers, Snodgrass, Samantha J., Arun Somwarpet Seetharam, Bruno Hüettel, Judith M. Kolkman et al. · 2023 · Figshare
  35. Additional file 5 of OLMALINC/OCT4/BMP2 axis enhances osteogenic-like phenotype of renal interstitial fibroblasts to participate in Randall’s plaque formation
    Zewu Zhu, Fang Huang, Yingcheng Jiang, Shuhao Ruan, Liu, Minghui, Youjie Zhang, Li, Yongchao, Chen, Jinbo, Yu Cui, Zhiyong Chen et al. · 2023 · Figshare
  36. Additional file 15 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  37. Additional file 16 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  38. Additional file 13 of Translocator protein (18kDA) (TSPO) marks mesenchymal glioblastoma cell populations characterized by elevated numbers of tumor-associated macrophages
    Lorraine Weidner, Julia Lorenz, Stefanie Quach, Frank Braun, Tanja Rothhammer-Hampl, Ammer, Laura-Marie, Arabel Vollmann-Zwerenz, Laura M. Bartos, Franziska J. Dekorsy, Adrien Holzgreve et al. · 2024 · Figshare
  39. Additional file 6 of Translocator protein (18kDA) (TSPO) marks mesenchymal glioblastoma cell populations characterized by elevated numbers of tumor-associated macrophages
    Lorraine Weidner, Julia Lorenz, Stefanie Quach, Frank Braun, Tanja Rothhammer-Hampl, Ammer, Laura-Marie, Arabel Vollmann-Zwerenz, Laura M. Bartos, Franziska J. Dekorsy, Adrien Holzgreve et al. · 2024 · Figshare
  40. Additional file 2 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  41. Additional file 2 of Epigenome-wide DNA methylation profiling of conditioned pain modulation in individuals with non-specific chronic low back pain
    Burel Goodin, Demario S. Overstreet, Terence M. Penn, Rahm J. Bakshi, Quinn, Tammie L., Andrew Sims, Travis Ptacek, Pamela Braboy Jackson, Long, D. Leann, Aroke, Edwin N. · 2022 · Figshare
  42. Additional file 3 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  43. Additional file 11 of Comprehensive analysis of the REST transcription factor regulatory networks in IDH mutant and IDH wild-type glioma cell lines and tumors
    Małgorzata Perycz, Dabrowski, Michal J., Marta Jardanowska, Roura, Adria-Jaume, Bartłomiej Gielniewski, Karolina Stępniak, Michał Dramiński, Iwona Anna Ciechomska, Bożena Kamińska, Bartosz Wojtaś · 2024 · Figshare
  44. Additional file 7 of Translocator protein (18kDA) (TSPO) marks mesenchymal glioblastoma cell populations characterized by elevated numbers of tumor-associated macrophages
    Lorraine Weidner, Julia Lorenz, Stefanie Quach, Frank Braun, Tanja Rothhammer-Hampl, Ammer, Laura-Marie, Arabel Vollmann-Zwerenz, Laura M. Bartos, Franziska J. Dekorsy, Adrien Holzgreve et al. · 2024 · Figshare
  45. Additional file 1 of Translocator protein (18kDA) (TSPO) marks mesenchymal glioblastoma cell populations characterized by elevated numbers of tumor-associated macrophages
    Lorraine Weidner, Julia Lorenz, Stefanie Quach, Frank Braun, Tanja Rothhammer-Hampl, Ammer, Laura-Marie, Arabel Vollmann-Zwerenz, Laura M. Bartos, Franziska J. Dekorsy, Adrien Holzgreve et al. · 2024 · Figshare
  46. Additional file 5 of Changes in gene body methylation do not correlate with changes in gene expression in Anthozoa or Hexapoda
    Groves Dixon, Mikhail V. Matz · 2022 · Figshare
  47. Additional file 1 of OLMALINC/OCT4/BMP2 axis enhances osteogenic-like phenotype of renal interstitial fibroblasts to participate in Randall’s plaque formation
    Zewu Zhu, Fang Huang, Yingcheng Jiang, Shuhao Ruan, Minghui Liu, Youjie Zhang, Li, Yongchao, Chen, Jinbo, Yu Cui, Zhiyong Chen et al. · 2023 · Figshare
  48. Additional file 1 of Changes in gene body methylation do not correlate with changes in gene expression in Anthozoa or Hexapoda
    Groves Dixon, Mikhail V. Matz · 2022 · Figshare
  49. Additional file 10 of Translocator protein (18kDA) (TSPO) marks mesenchymal glioblastoma cell populations characterized by elevated numbers of tumor-associated macrophages
    Lorraine Weidner, Julia Lorenz, Stefanie Quach, Frank Braun, Tanja Rothhammer-Hampl, Ammer, Laura-Marie, Arabel Vollmann-Zwerenz, Laura M. Bartos, Franziska J. Dekorsy, Adrien Holzgreve et al. · 2024 · Figshare
  50. Additional file 1 of Comprehensive analysis of the REST transcription factor regulatory networks in IDH mutant and IDH wild-type glioma cell lines and tumors
    Małgorzata Perycz, Dabrowski, Michal J., Marta Jardanowska, Roura, Adria-Jaume, Bartłomiej Gielniewski, Karolina Stępniak, Michał Dramiński, Iwona Anna Ciechomska, Bożena Kamińska, Bartosz Wojtaś · 2024 · Figshare
  51. Additional file 4 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  52. Additional file 2 of Comprehensive analysis of the REST transcription factor regulatory networks in IDH mutant and IDH wild-type glioma cell lines and tumors
    Małgorzata Perycz, Michał Dąbrowski, Marta Jardanowska, Roura, Adria-Jaume, Bartłomiej Gielniewski, Karolina Stępniak, Michał Dramiński, Iwona Anna Ciechomska, Bożena Kamińska, Bartosz Wojtaś · 2024 · Figshare
  53. Additional file 4 of Translocator protein (18kDA) (TSPO) marks mesenchymal glioblastoma cell populations characterized by elevated numbers of tumor-associated macrophages
    Lorraine Weidner, Julia Lorenz, Stefanie Quach, Frank Braun, Tanja Rothhammer-Hampl, Ammer, Laura-Marie, Arabel Vollmann-Zwerenz, Laura M. Bartos, Franziska J. Dekorsy, Adrien Holzgreve et al. · 2024 · Figshare
  54. Additional file 10 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  55. Additional file 13 of Specific isoforms of the ubiquitin ligase gene WWP2 are targets of osteoarthritis genetic risk via a differentially methylated DNA sequence
    Jack B. Roberts, Olivia Lucy Georgina Boldvig, Guillaume Aubourg, Sai Tanishq Kanchenapally, Deehan, David J., Sarah J. Rice, John A. Loughlin · 2024 · Figshare
  56. Additional file 11 of Specific isoforms of the ubiquitin ligase gene WWP2 are targets of osteoarthritis genetic risk via a differentially methylated DNA sequence
    Jack B. Roberts, Olivia Lucy Georgina Boldvig, Guillaume Aubourg, Sai Tanishq Kanchenapally, Deehan, David J., Sarah J. Rice, John A. Loughlin · 2024 · Figshare
  57. Additional file 12 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  58. Additional file 3 of Kidney-specific methylation patterns correlate with kidney function and are lost upon kidney disease progression
    Naor Sagy, Noa Meyrom, Pazit Beckerman, Oren Pleniceanu, Daniel Zvi Bar · 2024 · Figshare
  59. Additional file 2 of Translocator protein (18kDA) (TSPO) marks mesenchymal glioblastoma cell populations characterized by elevated numbers of tumor-associated macrophages
    Lorraine Weidner, Julia Lorenz, Stefanie Quach, Frank Braun, Tanja Rothhammer-Hampl, Ammer, Laura-Marie, Arabel Vollmann-Zwerenz, Laura M. Bartos, Franziska J. Dekorsy, Adrien Holzgreve et al. · 2024 · Figshare
  60. Additional file 3 of Identification of Eleutherococcus senticosus NAC transcription factors and their mechanisms in mediating DNA methylation of EsFPS, EsSS, and EsSE promoters to regulate saponin synthesis
    Dong, Jing, Zhao, Xuelei, Song, Xin, Shuo Wang, Xueying Zhao, Baoxiang Liang, Long, Yuehong, Xing, Zhaobin · 2024 · Figshare
  61. Additional file 11 of Extensive differential DNA methylation between tuberculosis skin test positive and skin test negative cattle
    Sajad Ahmad Bhat, Alia Parveen, Eamonn P. Gormley, Kieran G. Meade · 2024 · Figshare
  62. Promoter Methylation–Expression Coupling of Gliogenesis Genes in IDH-Wildtype Glioblastoma: Longitudinal Analysis and Prognostic Value
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