The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.
Patterns of DNA sequence diversity and genetic structure after a range expansion: lessons from the infinite‐island model
Abstract
It has been long recognized that population demographic expansions lead to distinctive features in the molecular diversity of populations. However, recent simulation results have suggested that a distinction could be made between a pure demographic expansion in an unsubdivided population, and a range expansion in a subdivided population, both leading to a large increase in the total number of the individuals. In order to better characterize the effect of a range expansion, I introduce a simple model of instantaneous expansion under an infinite‐island model, under which I derive the distribution of the number of mutation differences between pairs of genes (the mismatch distribution), the heterozygosity, the average number of pairwise difference, and the fixation index FST. These derivations are checked against simulations, and are shown to lead to results qualitatively similar to those one would obtain after a range expansion in a 2‐dimensional stepping‐stone model. I then apply these results to estimate immigration rates in hunter‐gather and post‐Neolithic human populations from patterns of mitochondrial (mtDNA) diversity. Potential problems with this estimation procedure are also discussed.
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Cites
Indo‐European origins: A computer‐simulation test of five hypotheses
Barbujani, G., Sokal, R. R., & Oden, N. L. (1995) · American Journal of Physical Anthropology · doi:10.1002/ajpa.1330960202 · Cited by 104
Cited by
The Fate of Mutations Surfing on the Wave of a Range Expansion
Klopfstein, S., Currat, M., & Excoffier, L. (2006) · Molecular Biology and Evolution · doi:10.1093/molbev/msj057 · Cited by 641
Self-citationThe Origins of Lactase Persistence in Europe
Itan, Y., Powell, A., Beaumont, M. A., Burger, J., & Thomas, M. G. (2009) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1000491 · Cited by 569
“related studies [33–36] the one we present is stochastic and more parameter-heavy.”
BackgroundMethodEarly Austronesians: Into and Out Of Taiwan
Ko, A. M.-S., Chen, C.-Y., Fu, Q., Delfin, F., Li, M., Chiu, H.-L., Stoneking, M., & Ko, Y.-C. (2014) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2014.02.003 · Cited by 310
Consequences of Range Contractions and Range Shifts on Molecular Diversity
Arenas, M., Ray, N., Currat, M., & Excoffier, L. (2012) · Molecular Biology and Evolution · doi:10.1093/molbev/msr187 · Cited by 236
Self-citationThe effect of the Neolithic expansion on European molecular diversity
Currat, M., & Excoffier, L. (2005) · Proceedings of the Royal Society B: Biological Sciences · doi:10.1098/rspb.2004.2999 · Cited by 210
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Metadata
- Authors
- Excoffier, L.
- Venue
- Molecular Ecology
- Publisher
- Wiley
- Published
- 2003-10-28
- Volume
- 13
- Issue
- 4
- Pages
- 853-864
- ISSN
- 0962-1083 (ISSN-L)
- 1365-294X
- OpenAlex
- W1979115933
- Cited by
- 663
- References
- 1
- FWCI
- 5.86
- Type
- journal article
- Language
- en
- Open access
- closed
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- Excoffier, L. (2004). Patterns of DNA sequence diversity and genetic structure after a range expansion: lessons from the infinite‐island model. Molecular Ecology. https://doi.org/10.1046/j.1365-294x.2003.02004.x
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