Cited by 408

NLR family member NLRC5 is a transcriptional regulator of MHC class I genes

Meissner, Torsten B., Li, Amy, Biswas, Amlan, Lee, Kyoung-Hee, Liu, Yuen-Joyce, Bayir, Erkan, Iliopoulos, Dimitrios, van den Elsen, Peter J. +1 more·2010·Proceedings of the National Academy of Sciences

Abstract

MHC class I plays a critical role in the immune defense against viruses and tumors by presenting antigens to CD8 T cells. An NLR protein, class II transactivator (CIITA), is a key regulator of MHC class II gene expression that associates and cooperates with transcription factors in the MHC class II promoter. Although CIITA also transactivates MHC class I gene promoters, loss of CIITA in humans and mice results in the severe reduction of only MHC class II expression, suggesting that additional mechanisms regulate the expression of MHC class I. Here, we identify another member of the NLR protein family, NLRC5, as a transcriptional regulator of MHC class I genes. Similar to CIITA, NLRC5 is an IFN-γ–inducible nuclear protein, and the expression of NLRC5 resulted in enhanced MHC class I expression in lymphoid as well as epithelial cell lines. Using chromatin immunoprecipitation and reporter gene assays, we show that NLRC5 associates with and activates the promoters of MHC class I genes. Furthermore, we show that the IFN-γ–induced up-regulation of MHC class I requires NLRC5, because knockdown of NLRC5 specifically impaired the expression of MHC class I. In addition to MHC class I genes, NLRC5 also induced the expression of β2-microglobulin, transporter associated with antigen processing, and large multifunctional protease, which are essential for MHC class I antigen presentation. Our results suggest that NLRC5 is a transcriptional regulator, orchestrating the concerted expression of critical components in the MHC class I pathway.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1073/pnas.1008684107

Cites

3 of 3 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • CIITA expression is restricted to antigen-presenting cells.

    “While CIITA expression is restricted to antigen-presenting cells, NLRC5 is constitutively expressed in various tissues, most highly in cells from the hematopoietic lineage (CD4 + T cells, CD8 + T cells, CD19 + B cells, natural killer cells and natural killer T cells).”
  • NLRC5 is constitutively expressed in various tissues, most highly in cells from the hematopoietic lineage (CD4+ T cells, CD8+ T cells, CD19+ B cells, natural killer cells and natural killer T cells).

    “While CIITA expression is restricted to antigen-presenting cells, NLRC5 is constitutively expressed in various tissues, most highly in cells from the hematopoietic lineage (CD4 + T cells, CD8 + T cells, CD19 + B cells, natural killer cells and natural killer T cells).”
  • NLRC5 and CIITA are the respective master regulators of MHC class I and II gene expression.

    “NLRC5 and CIITA are the respective master regulators of MHC class I and II gene expression 39 .”
  • NLRC5 expression levels are intermediate in monocytic CD14+ cells and CD11B+ splenic myeloid cells.

    “NLRC5 expression levels are intermediate in monocytic CD14 + cells and CD11B + splenic myeloid cells.”

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Cited by

Sorted by citations

Authors
Meissner, T. B., Li, A., Biswas, A., Lee, K.-H., Liu, Y.-J., Bayir, E., Iliopoulos, D., van den Elsen, P. J., & Kobayashi, K. S.
Affiliations
  • Department of Cancer Immunology and AIDS, Dana-Farber Cancer Institute, Boston, MA 02115;
  • Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115;
  • Department of Immunohematology and Blood Transfusion, Leiden University Medical Center, 2333 ZA Leiden, The Netherlands; and
Venue
Proceedings of the National Academy of Sciences
Published
2010-07-16
Volume
107
Issue
31
Pages
13794-13799
ISSN
  • 0027-8424
  • 1091-6490
Cited by
408
References
3
Language
en

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review