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Behavioral diversity in microbes and low-dimensional phenotypic spaces
Open accessAbstract
Systematic studies of phenotypic diversity—required for understanding evolution—lag behind investigations of genetic diversity. Here we develop a quantitative approach to studying behavioral diversity, which we apply to swimming of the ciliate Tetrahymena. We measure the full-lifetime behavior of hundreds of individual organisms at high temporal resolution, over several generations and in diverse nutrient conditions. To characterize population diversity and temporal variability we introduce a unique statistical framework grounded in the notion of a phenotypic space of behaviors. We show that this space is effectively low dimensional with dimensions that correlate with a two-state “roaming and dwelling” model of swimming behavior. Temporal variability over the lifetime of an individual is correlated with the fraction of time spent roaming whereas diversity between individuals is correlated with the speed of roaming. Quantifying the dynamics of behavioral variation shows that behavior over the lifetime of an individual is strongly nonstationary. Analysis of behavioral dynamics between generations reveals complex patterns of behavioral heritability that point to the importance of considering correlations beyond mothers and daughters. Our description of a low-dimensional behavioral space should enable the systematic study of the evolutionary and ecological bases of phenotypic constraints. Future experimental and theoretical studies of behavioral diversity will have to account for the possibility of nonstationary and environmentally dependent behavioral dynamics that we observe.
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Other studies have shown that the complexity and dimensionality of behaviors can be studied by embedding trajectories in a low-dimensional behavioral space.
“Other studies [19–22] have shown that the complexity and dimensionality of behaviors can be studied by embedding such trajectories in a low-dimensional “behavioral space.””
From The Behavioral Space of Zebrafish Locomotion and Its Neural Network Analog (2015) · cites this paper as [20]
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Cites
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Gallagher, T., Bjorness, T., Greene, R., You, Y.-J., & Avery, L. (2013) · PLoS ONE · doi:10.1371/journal.pone.0059865 · Cited by 85
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Sorted by citations
Transgenerational inheritance: Models and mechanisms of non–DNA sequence–based inheritance
Miska, E. A., & Ferguson-Smith, A. C. (2016) · Science · doi:10.1126/science.aaf4945 · Cited by 367
The Behavioral Space of Zebrafish Locomotion and Its Neural Network Analog
Girdhar, K., Gruebele, M., & Chemla, Y. R. (2015) · PLoS ONE · doi:10.1371/journal.pone.0128668 · Cited by 60
“Past behavioral studies have used both non-linear and linear clustering methods [19, 20], and here we applied a linear method to ensure robustness.”
Method
Metadata
- Authors
- Jordan, D., Kuehn, S., Katifori, E., & Leibler, S.
- Affiliations
- Rockefeller University (US)
- Max Planck Institute for Dynamics and Self-Organization (DE)
- Institute for Advanced Study (US)
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2013-07-29
- Volume
- 110
- Issue
- 34
- Pages
- 14018-14023
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC3752258
- OpenAlex
- W2032024800
- Cited by
- 52
- References
- 2
- Citations by year
- 2026: 6 · 2025: 2 · 2024: 3 · 2023: 6 · 2022: 4 · 2021: 6 · 2020: 5 · 2019: 4 · 2018: 3 · 2017: 2 · 2016: 2 · 2015: 6 · 2014: 3
- FWCI
- 2.43
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Max Planck Institute for Plasma Physics (submittedVersion)
- Max Planck Digital Library (submittedVersion)
- MPG.PuRe (Max Planck Society) (submittedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
- Life Sciences › Agricultural and Biological Sciences › Ecology, Evolution, Behavior and Systematics › Animal Behavior and Reproduction
- Life Sciences › Agricultural and Biological Sciences › Ecology, Evolution, Behavior and Systematics › Protist diversity and phylogeny
- Keywords
- behavioral diversity, phenotypic space, Tetrahymena, microbial behavior, nutrient status, evolution of behavior
- MeSH terms
- Biological Evolution, Models, Biological, Movement, Phenotype, Tetrahymena, Models, Statistical, Inheritance Patterns, Systems Biology
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